RNA–Protein interactions for RNA: ENST00000418375.1

TMEM248-203, Transcript of transmembrane protein 248, humanhuman

TSL 4

Gene TMEM248, Length 545 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-203ENST00000418375 ST20-MTHFSA0A0A6YYL1 179 aa18.77■□□□□ 0.6
TMEM248-203ENST00000418375 CABP2Q9NPB3 220 aa18.77■□□□□ 0.6
TMEM248-203ENST00000418375 SLIT2O94813 1529 aa18.77■□□□□ 0.6
TMEM248-203ENST00000418375 ATAD2Q6PL18 1390 aa18.77■□□□□ 0.6
TMEM248-203ENST00000418375 MARF1Q9Y4F3 1742 aaKnown RBP18.77■□□□□ 0.59
TMEM248-203ENST00000418375 ATP7BP35670 1465 aa18.77■□□□□ 0.59
TMEM248-203ENST00000418375 NGDNQ8NEJ9 315 aaKnown RBP18.75■□□□□ 0.59
TMEM248-203ENST00000418375 PLEKHG3A1L390 1219 aa18.72■□□□□ 0.59
TMEM248-203ENST00000418375 TESK2Q96S53 571 aa18.72■□□□□ 0.59
TMEM248-203ENST00000418375 PAK3O75914 559 aaPredicted RBP18.7■□□□□ 0.58
TMEM248-203ENST00000418375 EIF4G2P78344 907 aaKnown RBP eCLIP18.7■□□□□ 0.58
TMEM248-203ENST00000418375 ITSN1Q15811 1721 aa18.7■□□□□ 0.58
TMEM248-203ENST00000418375 PPIP5K1Q6PFW1 1433 aa18.7■□□□□ 0.58
TMEM248-203ENST00000418375 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.7■□□□□ 0.58
TMEM248-203ENST00000418375 FAM83GA6ND36 823 aa18.69■□□□□ 0.58
TMEM248-203ENST00000418375 TMF1P82094 1093 aa18.69■□□□□ 0.58
TMEM248-203ENST00000418375 VPS72Q15906 364 aa18.69■□□□□ 0.58
TMEM248-203ENST00000418375 PUS7Q96PZ0 661 aaKnown RBP18.69■□□□□ 0.58
TMEM248-203ENST00000418375 CABP1Q9NZU7 370 aa18.69■□□□□ 0.58
TMEM248-203ENST00000418375 ACEP12821 1306 aa18.69■□□□□ 0.58
TMEM248-203ENST00000418375 CCDC9Q9Y3X0 531 aaKnown RBP18.68■□□□□ 0.58
TMEM248-203ENST00000418375 TRPM3Q9HCF6 1732 aaPredicted RBP18.68■□□□□ 0.58
TMEM248-203ENST00000418375 GLI3P10071 1580 aa18.68■□□□□ 0.58
TMEM248-203ENST00000418375 POLR3AO14802 1390 aaPredicted RBP18.68■□□□□ 0.58
TMEM248-203ENST00000418375 TOPAZ1Q8N9V7 1692 aa18.66■□□□□ 0.58
TMEM248-203ENST00000418375 CDCA8Q53HL2 280 aa18.66■□□□□ 0.58
TMEM248-203ENST00000418375 ABCA3Q99758 1704 aa18.66■□□□□ 0.58
TMEM248-203ENST00000418375 ALS2Q96Q42 1657 aa18.65■□□□□ 0.58
TMEM248-203ENST00000418375 HSPA5P11021 654 aaKnown RBP18.64■□□□□ 0.57
TMEM248-203ENST00000418375 CCDC125Q86Z20 511 aa18.64■□□□□ 0.57
TMEM248-203ENST00000418375 SEPT12Q8IYM1 358 aa18.64■□□□□ 0.57
TMEM248-203ENST00000418375 BTG4Q9NY30 223 aa18.64■□□□□ 0.57
TMEM248-203ENST00000418375 PLCH1Q4KWH8 1693 aa18.63■□□□□ 0.57
TMEM248-203ENST00000418375 TMC1Q8TDI8 760 aa18.63■□□□□ 0.57
TMEM248-203ENST00000418375 NWD2Q9ULI1 1742 aa18.63■□□□□ 0.57
TMEM248-203ENST00000418375 ONECUT3O60422 494 aaPredicted RBP18.62■□□□□ 0.57
TMEM248-203ENST00000418375 ZNF692Q9BU19 519 aaPredicted RBP18.62■□□□□ 0.57
TMEM248-203ENST00000418375 BRD4O60885 1362 aaPredicted RBP18.61■□□□□ 0.57
TMEM248-203ENST00000418375 PRDM11Q9NQV5 511 aa18.61■□□□□ 0.57
TMEM248-203ENST00000418375 NINLQ9Y2I6 1382 aa18.6■□□□□ 0.57
TMEM248-203ENST00000418375 EP400Q96L91 3159 aa18.59■□□□□ 0.57
TMEM248-203ENST00000418375 A0A0G2JS52 829 aa18.59■□□□□ 0.57
TMEM248-203ENST00000418375 MYT1Q01538 1121 aa18.59■□□□□ 0.57
TMEM248-203ENST00000418375 USP6P35125 1406 aa18.58■□□□□ 0.57
TMEM248-203ENST00000418375 NUTM2GQ5VZR2 741 aa18.58■□□□□ 0.56
TMEM248-203ENST00000418375 HDGFL2Q7Z4V5 671 aaPredicted RBP18.58■□□□□ 0.56
TMEM248-203ENST00000418375 SLC12A5Q9H2X9 1139 aa18.58■□□□□ 0.56
TMEM248-203ENST00000418375 TERF2IPQ9NYB0 399 aa18.58■□□□□ 0.56
TMEM248-203ENST00000418375 COL14A1Q05707 1796 aaKnown RBP18.58■□□□□ 0.56
TMEM248-203ENST00000418375 FAM98CQ17RN3 349 aaKnown RBP18.57■□□□□ 0.56
TMEM248-203ENST00000418375 KRT27Q7Z3Y8 459 aa18.57■□□□□ 0.56
TMEM248-203ENST00000418375 BLMP54132 1417 aaPredicted RBP18.57■□□□□ 0.56
TMEM248-203ENST00000418375 CPSF1Q10570 1443 aaKnown RBP18.57■□□□□ 0.56
TMEM248-203ENST00000418375 KIAA0232Q92628 1395 aa18.56■□□□□ 0.56
TMEM248-203ENST00000418375 ABTB2Q8N961 1025 aa18.56■□□□□ 0.56
TMEM248-203ENST00000418375 KTN1Q86UP2 1357 aaKnown RBP18.55■□□□□ 0.56
TMEM248-203ENST00000418375 ZC3H6P61129 1189 aaKnown RBP18.55■□□□□ 0.56
TMEM248-203ENST00000418375 NRAPQ86VF7 1730 aa18.54■□□□□ 0.56
TMEM248-203ENST00000418375 CRYBG1Q9Y4K1 1723 aa18.54■□□□□ 0.56
TMEM248-203ENST00000418375 SPATA31A5Q5VU36 1347 aa18.54■□□□□ 0.56
TMEM248-203ENST00000418375 SPATA31A7Q8IWB4 1347 aa18.54■□□□□ 0.56
TMEM248-203ENST00000418375 SF3B2Q13435 895 aaKnown RBP18.54■□□□□ 0.56
TMEM248-203ENST00000418375 CHRNA2Q15822 529 aa18.54■□□□□ 0.56
TMEM248-203ENST00000418375 ZRANB1Q9UGI0 708 aa18.54■□□□□ 0.56
TMEM248-203ENST00000418375 TTC21BQ7Z4L5 1316 aa18.52■□□□□ 0.56
TMEM248-203ENST00000418375 TTC21AQ8NDW8 1320 aa18.52■□□□□ 0.56
TMEM248-203ENST00000418375 SSH2Q76I76 1423 aa18.52■□□□□ 0.56
TMEM248-203ENST00000418375 NLRP13Q86W25 1043 aa18.52■□□□□ 0.56
TMEM248-203ENST00000418375 POLR3GLQ9BT43 218 aa18.52■□□□□ 0.56
TMEM248-203ENST00000418375 CD163L1Q9NR16 1453 aa18.52■□□□□ 0.55
TMEM248-203ENST00000418375 BRWD3Q6RI45 1802 aa18.51■□□□□ 0.55
TMEM248-203ENST00000418375 STRN4Q9NRL3 753 aa18.51■□□□□ 0.55
TMEM248-203ENST00000418375 A0A1W2PP64 1363 aa18.51■□□□□ 0.55
TMEM248-203ENST00000418375 USP19O94966 1318 aa18.5■□□□□ 0.55
TMEM248-203ENST00000418375 PHRF1Q9P1Y6 1649 aaKnown RBP18.5■□□□□ 0.55
TMEM248-203ENST00000418375 ZEB1P37275 1124 aaPredicted RBP18.5■□□□□ 0.55
TMEM248-203ENST00000418375 ANKRD36BQ8N2N9 1353 aa18.5■□□□□ 0.55
TMEM248-203ENST00000418375 EDC4Q6P2E9 1401 aaKnown RBP18.49■□□□□ 0.55
TMEM248-203ENST00000418375 NLRP6P59044 892 aa18.49■□□□□ 0.55
TMEM248-203ENST00000418375 DEFB132Q7Z7B7 95 aa18.49■□□□□ 0.55
TMEM248-203ENST00000418375 AKAP12Q02952 1782 aa18.49■□□□□ 0.55
TMEM248-203ENST00000418375 SPATA31A1Q5TZJ5 1347 aa18.49■□□□□ 0.55
TMEM248-203ENST00000418375 MSH5O43196 834 aa18.48■□□□□ 0.55
TMEM248-203ENST00000418375 EVA1CP58658 441 aa18.48■□□□□ 0.55
TMEM248-203ENST00000418375 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.48■□□□□ 0.55
TMEM248-203ENST00000418375 CPDO75976 1380 aa18.47■□□□□ 0.55
TMEM248-203ENST00000418375 GCP02774 474 aa18.47■□□□□ 0.55
TMEM248-203ENST00000418375 NRKQ7Z2Y5 1582 aa18.46■□□□□ 0.55
TMEM248-203ENST00000418375 MON2Q7Z3U7 1717 aa18.46■□□□□ 0.55
TMEM248-203ENST00000418375 USP35Q9P2H5 1018 aa18.45■□□□□ 0.54
TMEM248-203ENST00000418375 C11orf95C9JLR9 678 aaPredicted RBP18.44■□□□□ 0.54
TMEM248-203ENST00000418375 BAG6P46379 1132 aa18.44■□□□□ 0.54
TMEM248-203ENST00000418375 FAM182BQ5T319 152 aa18.44■□□□□ 0.54
TMEM248-203ENST00000418375 LARP1Q6PKG0 1096 aaKnown RBP18.43■□□□□ 0.54
TMEM248-203ENST00000418375 NME9Q86XW9 330 aa18.43■□□□□ 0.54
TMEM248-203ENST00000418375 PIAS4Q8N2W9 510 aaPredicted RBP18.43■□□□□ 0.54
TMEM248-203ENST00000418375 THSD7AQ9UPZ6 1657 aa18.43■□□□□ 0.54
TMEM248-203ENST00000418375 CAMTA1Q9Y6Y1 1673 aa18.43■□□□□ 0.54
TMEM248-203ENST00000418375 USP31Q70CQ4 1352 aa18.42■□□□□ 0.54
TMEM248-203ENST00000418375 KCNH5Q8NCM2 988 aa18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms