RNA–Protein interactions for RNA: ENST00000418373.1

PDLIM4-203, Transcript of PDZ and LIM domain 4, humanhuman

TSL 5

Gene PDLIM4, Length 538 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-203ENST00000418373 TOPAZ1Q8N9V7 1692 aa18.72■□□□□ 0.59
PDLIM4-203ENST00000418373 PLEKHG5O94827 1062 aa18.71■□□□□ 0.59
PDLIM4-203ENST00000418373 PHRF1Q9P1Y6 1649 aaKnown RBP18.69■□□□□ 0.58
PDLIM4-203ENST00000418373 THSD7AQ9UPZ6 1657 aa18.68■□□□□ 0.58
PDLIM4-203ENST00000418373 CCDC9Q9Y3X0 531 aaKnown RBP18.67■□□□□ 0.58
PDLIM4-203ENST00000418373 KRT27Q7Z3Y8 459 aa18.66■□□□□ 0.58
PDLIM4-203ENST00000418373 BTG4Q9NY30 223 aa18.66■□□□□ 0.58
PDLIM4-203ENST00000418373 DEFB132Q7Z7B7 95 aa18.65■□□□□ 0.58
PDLIM4-203ENST00000418373 NGDNQ8NEJ9 315 aaKnown RBP18.64■□□□□ 0.57
PDLIM4-203ENST00000418373 NUDT16Q96DE0 195 aaKnown RBP18.64■□□□□ 0.57
PDLIM4-203ENST00000418373 RGPD1P0DJD0 1748 aa18.63■□□□□ 0.57
PDLIM4-203ENST00000418373 FAM98CQ17RN3 349 aaKnown RBP18.63■□□□□ 0.57
PDLIM4-203ENST00000418373 SPATA31A5Q5VU36 1347 aa18.63■□□□□ 0.57
PDLIM4-203ENST00000418373 SPATA31A7Q8IWB4 1347 aa18.63■□□□□ 0.57
PDLIM4-203ENST00000418373 POLR3AO14802 1390 aaPredicted RBP18.63■□□□□ 0.57
PDLIM4-203ENST00000418373 TNS1Q9HBL0 1735 aaKnown RBP18.61■□□□□ 0.57
PDLIM4-203ENST00000418373 LRP5O75197 1615 aa18.6■□□□□ 0.57
PDLIM4-203ENST00000418373 NRKQ7Z2Y5 1582 aa18.6■□□□□ 0.57
PDLIM4-203ENST00000418373 PAK3O75914 559 aaPredicted RBP18.6■□□□□ 0.57
PDLIM4-203ENST00000418373 SF3B2Q13435 895 aaKnown RBP18.6■□□□□ 0.57
PDLIM4-203ENST00000418373 CDK19Q9BWU1 502 aa18.6■□□□□ 0.57
PDLIM4-203ENST00000418373 KIAA0232Q92628 1395 aa18.59■□□□□ 0.57
PDLIM4-203ENST00000418373 PRDM11Q9NQV5 511 aa18.59■□□□□ 0.57
PDLIM4-203ENST00000418373 LMO7Q8WWI1 1683 aa18.57■□□□□ 0.56
PDLIM4-203ENST00000418373 A0A0G2JS52 829 aa18.57■□□□□ 0.56
PDLIM4-203ENST00000418373 MYT1Q01538 1121 aa18.57■□□□□ 0.56
PDLIM4-203ENST00000418373 CCDC61Q9Y6R9 512 aa18.57■□□□□ 0.56
PDLIM4-203ENST00000418373 QRICH2Q9H0J4 1663 aa18.57■□□□□ 0.56
PDLIM4-203ENST00000418373 ACEP12821 1306 aa18.56■□□□□ 0.56
PDLIM4-203ENST00000418373 PLEKHG3A1L390 1219 aa18.56■□□□□ 0.56
PDLIM4-203ENST00000418373 DISP2A7MBM2 1401 aa18.56■□□□□ 0.56
PDLIM4-203ENST00000418373 SPATA31A1Q5TZJ5 1347 aa18.55■□□□□ 0.56
PDLIM4-203ENST00000418373 NBPF1Q3BBV0 1214 aa18.55■□□□□ 0.56
PDLIM4-203ENST00000418373 NBPF8Q3BBV2 869 aa18.55■□□□□ 0.56
PDLIM4-203ENST00000418373 CAMTA1Q9Y6Y1 1673 aa18.54■□□□□ 0.56
PDLIM4-203ENST00000418373 BAG6P46379 1132 aa18.53■□□□□ 0.56
PDLIM4-203ENST00000418373 CHRNA2Q15822 529 aa18.53■□□□□ 0.56
PDLIM4-203ENST00000418373 USP19O94966 1318 aa18.52■□□□□ 0.56
PDLIM4-203ENST00000418373 SSH2Q76I76 1423 aa18.52■□□□□ 0.56
PDLIM4-203ENST00000418373 FAM182BQ5T319 152 aa18.52■□□□□ 0.56
PDLIM4-203ENST00000418373 NUTM2GQ5VZR2 741 aa18.52■□□□□ 0.56
PDLIM4-203ENST00000418373 CPDO75976 1380 aa18.52■□□□□ 0.55
PDLIM4-203ENST00000418373 PPIP5K1Q6PFW1 1433 aa18.51■□□□□ 0.55
PDLIM4-203ENST00000418373 ZC3H6P61129 1189 aaKnown RBP18.51■□□□□ 0.55
PDLIM4-203ENST00000418373 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
PDLIM4-203ENST00000418373 TRPM1Q7Z4N2 1603 aa18.49■□□□□ 0.55
PDLIM4-203ENST00000418373 EN1Q05925 392 aaPredicted RBP18.48■□□□□ 0.55
PDLIM4-203ENST00000418373 ABTB2Q8N961 1025 aa18.48■□□□□ 0.55
PDLIM4-203ENST00000418373 STRN4Q9NRL3 753 aa18.48■□□□□ 0.55
PDLIM4-203ENST00000418373 PARP4Q9UKK3 1724 aaKnown RBP18.48■□□□□ 0.55
PDLIM4-203ENST00000418373 BRD4O60885 1362 aaPredicted RBP18.47■□□□□ 0.55
PDLIM4-203ENST00000418373 BARGINQ6ZT62 677 aa18.47■□□□□ 0.55
PDLIM4-203ENST00000418373 RREB1Q92766 1687 aa18.47■□□□□ 0.55
PDLIM4-203ENST00000418373 SLIT3O75094 1523 aa18.46■□□□□ 0.55
PDLIM4-203ENST00000418373 PSDA5PKW4 1024 aaPredicted RBP18.46■□□□□ 0.55
PDLIM4-203ENST00000418373 PIK3C2AO00443 1686 aa18.46■□□□□ 0.55
PDLIM4-203ENST00000418373 COL5A2P05997 1499 aaPredicted RBP18.46■□□□□ 0.54
PDLIM4-203ENST00000418373 SRPK2P78362 688 aaKnown RBP18.45■□□□□ 0.54
PDLIM4-203ENST00000418373 CABP2Q9NPB3 220 aa18.45■□□□□ 0.54
PDLIM4-203ENST00000418373 USP6P35125 1406 aa18.45■□□□□ 0.54
PDLIM4-203ENST00000418373 LARP1Q6PKG0 1096 aaKnown RBP18.44■□□□□ 0.54
PDLIM4-203ENST00000418373 FAM196AQ6ZSG2 479 aa18.44■□□□□ 0.54
PDLIM4-203ENST00000418373 COL18A1P39060 1754 aa18.44■□□□□ 0.54
PDLIM4-203ENST00000418373 NUP188Q5SRE5 1749 aa18.43■□□□□ 0.54
PDLIM4-203ENST00000418373 AKAP12Q02952 1782 aa18.43■□□□□ 0.54
PDLIM4-203ENST00000418373 GCP02774 474 aa18.43■□□□□ 0.54
PDLIM4-203ENST00000418373 NLRP13Q86W25 1043 aa18.43■□□□□ 0.54
PDLIM4-203ENST00000418373 WNK3Q9BYP7 1800 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 TRIM37O94972 964 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 EVA1CP58658 441 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 L3MBTL2Q969R5 705 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 CAMKK2Q96RR4 588 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 USP35Q9P2H5 1018 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 PEAK1Q9H792 1746 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 PARD3Q8TEW0 1356 aa18.42■□□□□ 0.54
PDLIM4-203ENST00000418373 EZH2Q15910 746 aaKnown RBP18.41■□□□□ 0.54
PDLIM4-203ENST00000418373 TCP11L2Q8N4U5 519 aa18.41■□□□□ 0.54
PDLIM4-203ENST00000418373 SBF2Q86WG5 1849 aa18.4■□□□□ 0.54
PDLIM4-203ENST00000418373 CABP1Q9NZU7 370 aa18.4■□□□□ 0.54
PDLIM4-203ENST00000418373 LRRC37A3O60309 1634 aa18.4■□□□□ 0.54
PDLIM4-203ENST00000418373 R3HDM1Q15032 1099 aaKnown RBP18.39■□□□□ 0.53
PDLIM4-203ENST00000418373 THRAP3Q9Y2W1 955 aaKnown RBP18.39■□□□□ 0.53
PDLIM4-203ENST00000418373 AATKQ6ZMQ8 1374 aa18.39■□□□□ 0.53
PDLIM4-203ENST00000418373 CRB1P82279 1406 aa18.39■□□□□ 0.53
PDLIM4-203ENST00000418373 RGPD5Q99666 1765 aa18.37■□□□□ 0.53
PDLIM4-203ENST00000418373 PDE3BQ13370 1112 aa18.37■□□□□ 0.53
PDLIM4-203ENST00000418373 RGPD3A6NKT7 1758 aaPredicted RBP18.37■□□□□ 0.53
PDLIM4-203ENST00000418373 RGPD4Q7Z3J3 1758 aa18.37■□□□□ 0.53
PDLIM4-203ENST00000418373 EVC2Q86UK5 1308 aa18.36■□□□□ 0.53
PDLIM4-203ENST00000418373 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
PDLIM4-203ENST00000418373 APBA3O96018 575 aa18.35■□□□□ 0.53
PDLIM4-203ENST00000418373 NLRP6P59044 892 aa18.35■□□□□ 0.53
PDLIM4-203ENST00000418373 SIN3AQ96ST3 1273 aa18.35■□□□□ 0.53
PDLIM4-203ENST00000418373 CPSF1Q10570 1443 aaKnown RBP18.33■□□□□ 0.53
PDLIM4-203ENST00000418373 ROCK2O75116 1388 aaKnown RBP18.33■□□□□ 0.53
PDLIM4-203ENST00000418373 USP54Q70EL1 1684 aa18.32■□□□□ 0.52
PDLIM4-203ENST00000418373 NFAT5O94916 1531 aa18.32■□□□□ 0.52
PDLIM4-203ENST00000418373 OVOS2A0A0G2JMS6 1433 aa18.32■□□□□ 0.52
PDLIM4-203ENST00000418373 OVOS2A0A0J9YW53 1432 aa18.32■□□□□ 0.52
PDLIM4-203ENST00000418373 OVOS2Q6IE36 1432 aa18.32■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms