RNA–Protein interactions for RNA: ENST00000418258.5

PTCH1-205, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 7,815 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-205ENST00000418258 IFT57Q9NWB7 429 aa13.43□□□□□ -0.26
PTCH1-205ENST00000418258 ZNF771Q7L3S4 317 aaPredicted RBP13.43□□□□□ -0.26
PTCH1-205ENST00000418258 FYCO1Q9BQS8 1478 aa13.43□□□□□ -0.26
PTCH1-205ENST00000418258 MPHOSPH8Q99549 860 aa13.42□□□□□ -0.26
PTCH1-205ENST00000418258 MTHFSP49914 203 aa13.42□□□□□ -0.26
PTCH1-205ENST00000418258 PANK1Q8TE04 598 aa13.42□□□□□ -0.26
PTCH1-205ENST00000418258 HIP1O00291 1037 aa13.41□□□□□ -0.26
PTCH1-205ENST00000418258 ZSCAN29Q8IWY8 852 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-205ENST00000418258 MYO6Q9UM54 1294 aa13.41□□□□□ -0.26
PTCH1-205ENST00000418258 HSP90AA2PQ14568 343 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-205ENST00000418258 THEMISQ8N1K5 641 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-205ENST00000418258 ZNF644Q9H582 1327 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-205ENST00000418258 PRAM1Q96QH2 718 aa13.41□□□□□ -0.26
PTCH1-205ENST00000418258 BRPF1P55201 1214 aaPredicted RBP13.41□□□□□ -0.26
PTCH1-205ENST00000418258 CNTLNQ9NXG0 1405 aa13.41□□□□□ -0.26
PTCH1-205ENST00000418258 GNAI3P08754 354 aa13.41□□□□□ -0.26
PTCH1-205ENST00000418258 MNS1Q8NEH6 495 aa13.4□□□□□ -0.26
PTCH1-205ENST00000418258 ERC1Q8IUD2 1116 aa13.4□□□□□ -0.26
PTCH1-205ENST00000418258 C22orf23Q9BZE7 217 aa13.4□□□□□ -0.26
PTCH1-205ENST00000418258 ZHX3Q9H4I2 956 aa13.4□□□□□ -0.26
PTCH1-205ENST00000418258 RAD54L2Q9Y4B4 1467 aa13.4□□□□□ -0.26
PTCH1-205ENST00000418258 CHMP5Q9NZZ3 219 aa13.4□□□□□ -0.26
PTCH1-205ENST00000418258 SPG7Q9UQ90 795 aa13.4□□□□□ -0.26
PTCH1-205ENST00000418258 MPHOSPH10O00566 681 aaKnown RBP13.4□□□□□ -0.27
PTCH1-205ENST00000418258 GSE1Q14687 1217 aa13.4□□□□□ -0.27
PTCH1-205ENST00000418258 SIL1Q9H173 461 aa13.4□□□□□ -0.27
PTCH1-205ENST00000418258 CCDC57Q2TAC2 916 aa13.39□□□□□ -0.27
PTCH1-205ENST00000418258 SKIDA1Q1XH10 827 aa13.39□□□□□ -0.27
PTCH1-205ENST00000418258 CDC45O75419 566 aa13.39□□□□□ -0.27
PTCH1-205ENST00000418258 KINO60870 393 aaKnown RBP13.38□□□□□ -0.27
PTCH1-205ENST00000418258 GNAI2P04899 355 aa13.38□□□□□ -0.27
PTCH1-205ENST00000418258 ACBD3Q9H3P7 528 aa13.38□□□□□ -0.27
PTCH1-205ENST00000418258 IBSPP21815 317 aaPredicted RBP13.38□□□□□ -0.27
PTCH1-205ENST00000418258 MATR3P43243 847 aaKnown RBP eCLIP13.38□□□□□ -0.27
PTCH1-205ENST00000418258 TSHZ2Q9NRE2 1034 aa13.38□□□□□ -0.27
PTCH1-205ENST00000418258 FILIP1LQ4L180 1135 aa13.38□□□□□ -0.27
PTCH1-205ENST00000418258 NACAP1Q9BZK3 213 aa13.38□□□□□ -0.27
PTCH1-205ENST00000418258 CEBPZQ03701 1054 aaKnown RBP13.38□□□□□ -0.27
PTCH1-205ENST00000418258 STAC3Q96MF2 364 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 CCDC69A6NI79 296 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 PRKAR2BP31323 418 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 HDGFL1Q5TGJ6 251 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 PDCL3Q9H2J4 239 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 RUSC2Q8N2Y8 1516 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 SMARCE1Q969G3 411 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 SMC2O95347 1197 aa13.37□□□□□ -0.27
PTCH1-205ENST00000418258 FKBP4Q02790 459 aaKnown RBP eCLIP13.36□□□□□ -0.27
PTCH1-205ENST00000418258 CDK19Q9BWU1 502 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 ARGLU1Q9NWB6 273 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-205ENST00000418258 PRDM11Q9NQV5 511 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 HSP90B2PQ58FF3 399 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 BICDL1Q6ZP65 573 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 AFAP1Q8N556 730 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 AQRO60306 1485 aaKnown RBP eCLIP13.36□□□□□ -0.273e-7■■■□□ 17
PTCH1-205ENST00000418258 SYNJ2O15056 1496 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 C1orf115Q9H7X2 142 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 ANKRD50Q9ULJ7 1429 aa13.36□□□□□ -0.27
PTCH1-205ENST00000418258 ANKLE2Q86XL3 938 aa13.35□□□□□ -0.27
PTCH1-205ENST00000418258 FMNL2Q96PY5 1086 aa13.35□□□□□ -0.27
PTCH1-205ENST00000418258 SULT6B1Q6IMI4 303 aa13.35□□□□□ -0.27
PTCH1-205ENST00000418258 NUP133Q8WUM0 1156 aa13.35□□□□□ -0.27
PTCH1-205ENST00000418258 NEFHP12036 1026 aa13.34□□□□□ -0.27
PTCH1-205ENST00000418258 SOGA3Q5TF21 947 aa13.34□□□□□ -0.27
PTCH1-205ENST00000418258 TRIM22Q8IYM9 498 aa13.34□□□□□ -0.27
PTCH1-205ENST00000418258 TWISTNBQ3B726 338 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-205ENST00000418258 ZNF530Q6P9A1 599 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-205ENST00000418258 ZNF396Q96N95 335 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-205ENST00000418258 SLC4A2P04920 1241 aa13.34□□□□□ -0.27
PTCH1-205ENST00000418258 PDCP20941 246 aa13.34□□□□□ -0.27
PTCH1-205ENST00000418258 BTBD11A6QL63 1104 aa13.34□□□□□ -0.27
PTCH1-205ENST00000418258 SPINK5Q9NQ38 1064 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-205ENST00000418258 MAP4K4O95819 1239 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-205ENST00000418258 XPCQ01831 940 aaPredicted RBP13.33□□□□□ -0.28
PTCH1-205ENST00000418258 CFAP70Q5T0N1 1121 aa13.33□□□□□ -0.28
PTCH1-205ENST00000418258 ZNF76P36508 570 aa13.33□□□□□ -0.28
PTCH1-205ENST00000418258 STK3Q13188 491 aa13.33□□□□□ -0.28
PTCH1-205ENST00000418258 STIM1Q13586 685 aa13.33□□□□□ -0.28
PTCH1-205ENST00000418258 ZSCAN25Q6NSZ9 544 aa13.33□□□□□ -0.28
PTCH1-205ENST00000418258 FGD6Q6ZV73 1430 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 TRIM5Q9C035 493 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 TANGO6Q9C0B7 1094 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 TDO2P48775 406 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 NEK4P51957 841 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 MAP7D2Q96T17 732 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 NOB1Q9ULX3 412 aaKnown RBP13.32□□□□□ -0.28
PTCH1-205ENST00000418258 STK38Q15208 465 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 DCTN1Q14203 1278 aa13.32□□□□□ -0.28
PTCH1-205ENST00000418258 ZNHIT6Q9NWK9 470 aaKnown RBP13.32□□□□□ -0.28
PTCH1-205ENST00000418258 TCP11L2Q8N4U5 519 aa13.31□□□□□ -0.28
PTCH1-205ENST00000418258 ZNF692Q9BU19 519 aaPredicted RBP13.31□□□□□ -0.28
PTCH1-205ENST00000418258 AAMPQ13685 434 aa13.31□□□□□ -0.28
PTCH1-205ENST00000418258 FAM13BQ9NYF5 915 aa13.31□□□□□ -0.28
PTCH1-205ENST00000418258 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
PTCH1-205ENST00000418258 LETM1O95202 739 aaPredicted RBP13.31□□□□□ -0.28
PTCH1-205ENST00000418258 SEPT7Q16181 437 aaKnown RBP13.31□□□□□ -0.28
PTCH1-205ENST00000418258 PNISRQ8TF01 805 aaKnown RBP13.31□□□□□ -0.28
PTCH1-205ENST00000418258 LRP2BPQ9P2M1 347 aa13.31□□□□□ -0.28
PTCH1-205ENST00000418258 CHMP4BP1P59074 171 aa13.31□□□□□ -0.28
PTCH1-205ENST00000418258 PAXIP1Q6ZW49 1069 aaPredicted RBP13.3□□□□□ -0.28
PTCH1-205ENST00000418258 ZPR1O75312 459 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 67.9 ms