RNA–Protein interactions for RNA: ENST00000418006.1

LINC00940-201, long intergenic non-protein coding RNA 940, humanhuman

TSL 2 BASIC

Gene LINC00940, Length 2,350 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00940-201ENST00000418006 INSRP06213 1382 aa18.03■□□□□ 0.48
LINC00940-201ENST00000418006 ARHGAP23Q9P227 1491 aa18.02■□□□□ 0.48
LINC00940-201ENST00000418006 TBX22Q9Y458 520 aa18.02■□□□□ 0.47
LINC00940-201ENST00000418006 CPS1P31327 1500 aa18.01■□□□□ 0.47
LINC00940-201ENST00000418006 PRR36Q9H6K5 1346 aa18.01■□□□□ 0.47
LINC00940-201ENST00000418006 MS4A1P11836 297 aa18.01■□□□□ 0.47
LINC00940-201ENST00000418006 RCAN3Q9UKA8 241 aa18.01■□□□□ 0.47
LINC00940-201ENST00000418006 RRP7AQ9Y3A4 280 aaKnown RBP18.01■□□□□ 0.47
LINC00940-201ENST00000418006 U2AF1L5P0DN76 240 aaPredicted RBP18■□□□□ 0.47
LINC00940-201ENST00000418006 U2AF1Q01081 240 aaKnown RBP eCLIP18■□□□□ 0.47
LINC00940-201ENST00000418006 ZRANB1Q9UGI0 708 aa18■□□□□ 0.47
LINC00940-201ENST00000418006 KNDC1Q76NI1 1749 aa18■□□□□ 0.47
LINC00940-201ENST00000418006 CEP170BQ9Y4F5 1589 aaPredicted RBP18■□□□□ 0.47
LINC00940-201ENST00000418006 U2SURPO15042 1029 aaKnown RBP17.99■□□□□ 0.47
LINC00940-201ENST00000418006 NME9Q86XW9 330 aa17.99■□□□□ 0.47
LINC00940-201ENST00000418006 MED14O60244 1454 aa17.99■□□□□ 0.47
LINC00940-201ENST00000418006 ANKLE2Q86XL3 938 aa17.98■□□□□ 0.47
LINC00940-201ENST00000418006 RBM33Q96EV2 1170 aaKnown RBP17.98■□□□□ 0.47
LINC00940-201ENST00000418006 GOLGA2Q08379 1002 aa17.97■□□□□ 0.47
LINC00940-201ENST00000418006 BRPF3Q9ULD4 1205 aa17.97■□□□□ 0.47
LINC00940-201ENST00000418006 SIPA1L2Q9P2F8 1722 aaPredicted RBP17.97■□□□□ 0.47
LINC00940-201ENST00000418006 KCNA6P17658 529 aa17.97■□□□□ 0.47
LINC00940-201ENST00000418006 ATP7BP35670 1465 aa17.97■□□□□ 0.47
LINC00940-201ENST00000418006 PMFBP1Q8TBY8 1022 aa17.96■□□□□ 0.47
LINC00940-201ENST00000418006 GSE1Q14687 1217 aa17.95■□□□□ 0.46
LINC00940-201ENST00000418006 SHPRHQ149N8 1683 aa17.94■□□□□ 0.46
LINC00940-201ENST00000418006 RUNDC1Q96C34 613 aa17.94■□□□□ 0.46
LINC00940-201ENST00000418006 SPINK5Q9NQ38 1064 aaPredicted RBP17.94■□□□□ 0.46
LINC00940-201ENST00000418006 CPSF1Q10570 1443 aaKnown RBP17.94■□□□□ 0.46
LINC00940-201ENST00000418006 PLIN1O60240 522 aa17.94■□□□□ 0.46
LINC00940-201ENST00000418006 TCP11L2Q8N4U5 519 aa17.94■□□□□ 0.46
LINC00940-201ENST00000418006 ACEP12821 1306 aa17.94■□□□□ 0.46
LINC00940-201ENST00000418006 ADAMTSL3P82987 1691 aa17.93■□□□□ 0.46
LINC00940-201ENST00000418006 ZNF521Q96K83 1311 aa17.93■□□□□ 0.46
LINC00940-201ENST00000418006 UBE2Q2Q8WVN8 375 aa17.93■□□□□ 0.46
LINC00940-201ENST00000418006 DMRT2Q9Y5R5 561 aa17.93■□□□□ 0.46
LINC00940-201ENST00000418006 DUSP27Q5VZP5 1158 aa17.93■□□□□ 0.46
LINC00940-201ENST00000418006 EDC4Q6P2E9 1401 aaKnown RBP17.92■□□□□ 0.46
LINC00940-201ENST00000418006 DDRGK1Q96HY6 314 aa17.92■□□□□ 0.46
LINC00940-201ENST00000418006 KIF20BQ96Q89 1820 aa17.92■□□□□ 0.46
LINC00940-201ENST00000418006 COG3Q96JB2 828 aa17.91■□□□□ 0.46
LINC00940-201ENST00000418006 EMILIN1Q9Y6C2 1016 aa17.91■□□□□ 0.46
LINC00940-201ENST00000418006 SOX12O15370 315 aa17.91■□□□□ 0.46
LINC00940-201ENST00000418006 POLKQ9UBT6 870 aa17.91■□□□□ 0.46
LINC00940-201ENST00000418006 RRS1Q15050 365 aaKnown RBP17.9■□□□□ 0.46
LINC00940-201ENST00000418006 ZNF692Q9BU19 519 aaPredicted RBP17.9■□□□□ 0.46
LINC00940-201ENST00000418006 DIAPH1O60610 1272 aaKnown RBP17.9■□□□□ 0.46
LINC00940-201ENST00000418006 SLFN5Q08AF3 891 aa17.9■□□□□ 0.46
LINC00940-201ENST00000418006 WWC1Q8IX03 1113 aa17.9■□□□□ 0.46
LINC00940-201ENST00000418006 CDC42BPGQ6DT37 1551 aa17.9■□□□□ 0.46
LINC00940-201ENST00000418006 NFKBIBQ15653 356 aa17.89■□□□□ 0.45
LINC00940-201ENST00000418006 ANKRD26Q9UPS8 1709 aa17.89■□□□□ 0.45
LINC00940-201ENST00000418006 NGDNQ8NEJ9 315 aaKnown RBP17.88■□□□□ 0.45
LINC00940-201ENST00000418006 PTCH1Q13635 1447 aa17.87■□□□□ 0.45
LINC00940-201ENST00000418006 DIP2AQ14689 1571 aa17.86■□□□□ 0.45
LINC00940-201ENST00000418006 NKTRP30414 1462 aaKnown RBP17.86■□□□□ 0.45
LINC00940-201ENST00000418006 TTC21BQ7Z4L5 1316 aa17.86■□□□□ 0.45
LINC00940-201ENST00000418006 FRAT1Q92837 279 aaPredicted RBP17.86■□□□□ 0.45
LINC00940-201ENST00000418006 ADGRB2O60241 1585 aa17.85■□□□□ 0.45
LINC00940-201ENST00000418006 SETD1BQ9UPS6 1966 aaKnown RBP17.85■□□□□ 0.45
LINC00940-201ENST00000418006 PLEKHG3A1L390 1219 aa17.85■□□□□ 0.45
LINC00940-201ENST00000418006 E9PSI1 815 aa17.85■□□□□ 0.45
LINC00940-201ENST00000418006 SKAP1Q86WV1 359 aa17.85■□□□□ 0.45
LINC00940-201ENST00000418006 ITSN1Q15811 1721 aa17.85■□□□□ 0.45
LINC00940-201ENST00000418006 MAPK8IP3Q9UPT6 1336 aa17.84■□□□□ 0.45
LINC00940-201ENST00000418006 HMOX1P09601 288 aa17.84■□□□□ 0.45
LINC00940-201ENST00000418006 C14orf37Q86TY3 774 aa17.84■□□□□ 0.45
LINC00940-201ENST00000418006 COL3A1P02461 1466 aaPredicted RBP17.84■□□□□ 0.45
LINC00940-201ENST00000418006 MAP2P11137 1827 aaKnown RBP17.83■□□□□ 0.44
LINC00940-201ENST00000418006 SLC4A3P48751 1232 aa17.82■□□□□ 0.44
LINC00940-201ENST00000418006 MON2Q7Z3U7 1717 aa17.82■□□□□ 0.44
LINC00940-201ENST00000418006 ZNF142P52746 1687 aaPredicted RBP17.82■□□□□ 0.44
LINC00940-201ENST00000418006 NUTM2GQ5VZR2 741 aa17.81■□□□□ 0.44
LINC00940-201ENST00000418006 NGEFQ8N5V2 710 aa17.81■□□□□ 0.44
LINC00940-201ENST00000418006 PLEKHF1Q96S99 279 aa17.81■□□□□ 0.44
LINC00940-201ENST00000418006 XRN1Q8IZH2 1706 aaKnown RBP17.81■□□□□ 0.44
LINC00940-201ENST00000418006 RGPD8O14715 1765 aaPredicted RBP17.81■□□□□ 0.44
LINC00940-201ENST00000418006 AKAP12Q02952 1782 aa17.81■□□□□ 0.44
LINC00940-201ENST00000418006 PNPLA6Q8IY17 1366 aa17.81■□□□□ 0.44
LINC00940-201ENST00000418006 USP6P35125 1406 aa17.81■□□□□ 0.44
LINC00940-201ENST00000418006 TRMT2AQ8IZ69 625 aaKnown RBP17.81■□□□□ 0.44
LINC00940-201ENST00000418006 EIF5BO60841 1220 aaKnown RBP17.8■□□□□ 0.44
LINC00940-201ENST00000418006 C20orf194Q5TEA3 1177 aa17.8■□□□□ 0.44
LINC00940-201ENST00000418006 PIK3R4Q99570 1358 aa17.8■□□□□ 0.44
LINC00940-201ENST00000418006 IQSEC2Q5JU85 1478 aa17.8■□□□□ 0.44
LINC00940-201ENST00000418006 NPHP4O75161 1426 aaPredicted RBP17.79■□□□□ 0.44
LINC00940-201ENST00000418006 PRKAR2BP31323 418 aa17.79■□□□□ 0.44
LINC00940-201ENST00000418006 CRBNQ96SW2 442 aa17.79■□□□□ 0.44
LINC00940-201ENST00000418006 BCAR3O75815 825 aa17.79■□□□□ 0.44
LINC00940-201ENST00000418006 TMPOP42166 694 aaKnown RBP17.79■□□□□ 0.44
LINC00940-201ENST00000418006 TOPAZ1Q8N9V7 1692 aa17.78■□□□□ 0.44
LINC00940-201ENST00000418006 RIPK4P57078 832 aa17.78■□□□□ 0.44
LINC00940-201ENST00000418006 DAXXQ9UER7 740 aaPredicted RBP17.77■□□□□ 0.44
LINC00940-201ENST00000418006 PLEKHG5O94827 1062 aa17.76■□□□□ 0.43
LINC00940-201ENST00000418006 IL13P35225 146 aa17.76■□□□□ 0.43
LINC00940-201ENST00000418006 FCHSD2O94868 740 aa17.75■□□□□ 0.43
LINC00940-201ENST00000418006 WDR63Q8IWG1 891 aa17.75■□□□□ 0.43
LINC00940-201ENST00000418006 RSPH6AQ9H0K4 717 aa17.75■□□□□ 0.43
LINC00940-201ENST00000418006 AATKQ6ZMQ8 1374 aa17.75■□□□□ 0.43
LINC00940-201ENST00000418006 CHD2O14647 1828 aaKnown RBP17.75■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms