RNA–Protein interactions for RNA: ENST00000417717.6

SATB1-204, Transcript of SATB homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene SATB1, Length 4,589 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SATB1-204ENST00000417717 FMNL3Q8IVF7 1028 aa12.26□□□□□ -0.45
SATB1-204ENST00000417717 JPH4Q96JJ6 628 aa12.26□□□□□ -0.45
SATB1-204ENST00000417717 EIF3AQ14152 1382 aaKnown RBP12.25□□□□□ -0.45
SATB1-204ENST00000417717 MCM2P49736 904 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 IQCEQ6IPM2 695 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 C10orf67Q8IYJ2 551 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 PRKRIP1Q9H875 184 aaPredicted RBP12.25□□□□□ -0.45
SATB1-204ENST00000417717 GOLGA6L9A6NEM1 432 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 PLIN1O60240 522 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 ERLIN2O94905 339 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 MCM3P25205 808 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 RNF168Q8IYW5 571 aaPredicted RBP12.25□□□□□ -0.45
SATB1-204ENST00000417717 SMC2O95347 1197 aa12.25□□□□□ -0.45
SATB1-204ENST00000417717 AP1ARQ63HQ0 302 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 KLHL34Q8N239 644 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 SMARCC1Q92922 1105 aaPredicted RBP12.24□□□□□ -0.45
SATB1-204ENST00000417717 SMARCE1Q969G3 411 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 RBM33Q96EV2 1170 aaKnown RBP12.24□□□□□ -0.45
SATB1-204ENST00000417717 KIF7Q2M1P5 1343 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 HS1BP3Q53T59 392 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 PAXBP1Q9Y5B6 917 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 LRRC9Q6ZRR7 1453 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 SEPT6Q14141 434 aa12.24□□□□□ -0.45
SATB1-204ENST00000417717 ATP6V1AP38606 617 aa12.23□□□□□ -0.45
SATB1-204ENST00000417717 MAP2K2P36507 400 aa12.23□□□□□ -0.45
SATB1-204ENST00000417717 WASHC2CQ9Y4E1 1318 aa12.23□□□□□ -0.45
SATB1-204ENST00000417717 RNF187Q5TA31 235 aaPredicted RBP12.23□□□□□ -0.45
SATB1-204ENST00000417717 PDILTQ8N807 584 aa12.23□□□□□ -0.45
SATB1-204ENST00000417717 VPS37CA5D8V6 355 aaPredicted RBP12.23□□□□□ -0.45
SATB1-204ENST00000417717 RRBP1Q9P2E9 1410 aaKnown RBP12.23□□□□□ -0.45
SATB1-204ENST00000417717 POTEB2H3BUK9 544 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 ANKRD45Q5TZF3 282 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 JAKMIP3Q5VZ66 844 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 WASHC2AQ641Q2 1341 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 FAM114A1Q8IWE2 563 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 PCMTD1Q96MG8 357 aaPredicted RBP12.22□□□□□ -0.45
SATB1-204ENST00000417717 INTS3Q68E01 1043 aaKnown RBP12.22□□□□□ -0.45
SATB1-204ENST00000417717 OLFM4Q6UX06 510 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 NGEFQ8N5V2 710 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 RSRC1Q96IZ7 334 aaKnown RBP12.22□□□□□ -0.45
SATB1-204ENST00000417717 SDF4Q9BRK5 362 aa12.22□□□□□ -0.45
SATB1-204ENST00000417717 ODF2Q5BJF6 829 aa12.21□□□□□ -0.45
SATB1-204ENST00000417717 MICALL1Q8N3F8 863 aa12.21□□□□□ -0.45
SATB1-204ENST00000417717 V9GYY5 206 aaPredicted RBP12.21□□□□□ -0.45
SATB1-204ENST00000417717 UTP14CQ5TAP6 766 aaKnown RBP12.21□□□□□ -0.45
SATB1-204ENST00000417717 NUP133Q8WUM0 1156 aa12.21□□□□□ -0.45
SATB1-204ENST00000417717 RTF1Q92541 710 aaKnown RBP12.21□□□□□ -0.45
SATB1-204ENST00000417717 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.21□□□□□ -0.46
SATB1-204ENST00000417717 KIAA0586Q9BVV6 1533 aa12.2□□□□□ -0.46
SATB1-204ENST00000417717 NEMFO60524 1076 aa12.2□□□□□ -0.46
SATB1-204ENST00000417717 ZKSCAN1P17029 563 aaPredicted RBP12.2□□□□□ -0.46
SATB1-204ENST00000417717 HSPA4P34932 840 aa12.2□□□□□ -0.46
SATB1-204ENST00000417717 NAP1L1P55209 391 aaKnown RBP12.2□□□□□ -0.46
SATB1-204ENST00000417717 MPNDQ8N594 471 aa12.2□□□□□ -0.46
SATB1-204ENST00000417717 CCDC47Q96A33 483 aaKnown RBP12.2□□□□□ -0.46
SATB1-204ENST00000417717 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.2□□□□□ -0.46
SATB1-204ENST00000417717 ZKSCAN2Q63HK3 967 aa12.2□□□□□ -0.46
SATB1-204ENST00000417717 MAGI1Q96QZ7 1491 aaPredicted RBP12.19□□□□□ -0.46
SATB1-204ENST00000417717 MYBBP1AQ9BQG0 1328 aaKnown RBP12.19□□□□□ -0.46
SATB1-204ENST00000417717 KINO60870 393 aaKnown RBP12.19□□□□□ -0.46
SATB1-204ENST00000417717 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.19□□□□□ -0.46
SATB1-204ENST00000417717 RSPH14Q9UHP6 348 aa12.19□□□□□ -0.46
SATB1-204ENST00000417717 CPLX2Q6PUV4 134 aaKnown RBP12.19□□□□□ -0.46
SATB1-204ENST00000417717 COG6Q9Y2V7 657 aa12.19□□□□□ -0.46
SATB1-204ENST00000417717 ZBTB12Q9Y330 459 aaPredicted RBP12.19□□□□□ -0.46
SATB1-204ENST00000417717 XRCC6P12956 609 aaKnown RBP eCLIP12.19□□□□□ -0.46
SATB1-204ENST00000417717 PPM1EQ8WY54 764 aa12.19□□□□□ -0.46
SATB1-204ENST00000417717 MIPOL1Q8TD10 442 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 DDX19BQ9UMR2 479 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 DRC1Q96MC2 740 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 RUFY2Q8WXA3 655 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 PDCP20941 246 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 NAA25Q14CX7 972 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 FILIP1LQ4L180 1135 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 ZKSCAN5Q9Y2L8 839 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 WDR97A6NE52 1622 aa12.18□□□□□ -0.46
SATB1-204ENST00000417717 TIAM1Q13009 1591 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 RBBP5Q15291 538 aaKnown RBP12.17□□□□□ -0.46
SATB1-204ENST00000417717 RGL3Q3MIN7 710 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 DZIP1Q86YF9 867 aaKnown RBP12.17□□□□□ -0.46
SATB1-204ENST00000417717 TCHPQ9BT92 498 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 RPAINQ86UA6 219 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 RAB3GAP2Q9H2M9 1393 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 EBAG9O00559 213 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 ANKRD18AQ8IVF6 992 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 CEP83Q9Y592 693 aa12.17□□□□□ -0.46
SATB1-204ENST00000417717 ZSCAN12O43309 604 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 MORC1Q86VD1 984 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 CEP57Q86XR8 500 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 STAG3Q9UJ98 1225 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 CBFA2T2O43439 604 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 SEPT14Q6ZU15 432 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 KIF15Q9NS87 1388 aa12.16□□□□□ -0.46
SATB1-204ENST00000417717 K7ELQ4 463 aaPredicted RBP12.16□□□□□ -0.46
SATB1-204ENST00000417717 MAP2K1Q02750 393 aaPredicted RBP12.16□□□□□ -0.46
SATB1-204ENST00000417717 ZNF397Q8NF99 534 aaPredicted RBP12.16□□□□□ -0.46
SATB1-204ENST00000417717 LRRFIP2Q9Y608 721 aaKnown RBP12.16□□□□□ -0.46
SATB1-204ENST00000417717 CDC45O75419 566 aa12.15□□□□□ -0.46
SATB1-204ENST00000417717 CCDC175P0C221 793 aa12.15□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms