RNA–Protein interactions for RNA: ENST00000417628.6

ECHDC1-206, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

TSL 5

Gene ECHDC1, Length 767 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-206ENST00000417628 BAG6P46379 1132 aa8.9□□□□□ -0.98
ECHDC1-206ENST00000417628 ASXL1Q8IXJ9 1541 aa8.9□□□□□ -0.99
ECHDC1-206ENST00000417628 NCOA3Q9Y6Q9 1424 aa8.89□□□□□ -0.99
ECHDC1-206ENST00000417628 SPHKAPQ2M3C7 1700 aa8.89□□□□□ -0.99
ECHDC1-206ENST00000417628 GIGYF1O75420 1035 aaPredicted RBP8.89□□□□□ -0.99
ECHDC1-206ENST00000417628 BRINP3Q76B58 766 aa8.89□□□□□ -0.99
ECHDC1-206ENST00000417628 LRRC59Q96AG4 307 aaKnown RBP8.89□□□□□ -0.99
ECHDC1-206ENST00000417628 ZNF777Q9ULD5 760 aaPredicted RBP8.89□□□□□ -0.99
ECHDC1-206ENST00000417628 TIMELESSQ9UNS1 1208 aa8.89□□□□□ -0.99
ECHDC1-206ENST00000417628 DHX29Q7Z478 1369 aaKnown RBP8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 KIF3BO15066 747 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 HNRNPMP52272 730 aaKnown RBP eCLIP8.88□□□□□ -0.993e-8■■■■■ 29
ECHDC1-206ENST00000417628 TMEM92Q6UXU6 159 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 FNBP4Q8N3X1 1017 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 SLC26A8Q96RN1 970 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 ATP1B4Q9UN42 357 aaPredicted RBP8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 CAMSAP2Q08AD1 1489 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 PLEKHH2Q8IVE3 1493 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 CDC42BPAQ5VT25 1732 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 KIAA1107Q9UPP5 1409 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 TET3O43151 1660 aa8.88□□□□□ -0.99
ECHDC1-206ENST00000417628 PLCG2P16885 1265 aa8.87□□□□□ -0.99
ECHDC1-206ENST00000417628 ATF3P18847 181 aa8.87□□□□□ -0.99
ECHDC1-206ENST00000417628 NEUROD2Q15784 382 aa8.87□□□□□ -0.99
ECHDC1-206ENST00000417628 C14orf37Q86TY3 774 aa8.87□□□□□ -0.99
ECHDC1-206ENST00000417628 GPIHBP1Q8IV16 184 aa8.87□□□□□ -0.99
ECHDC1-206ENST00000417628 DCBLD2Q96PD2 775 aa8.87□□□□□ -0.99
ECHDC1-206ENST00000417628 PPP1R1BQ9UD71 204 aaPredicted RBP8.87□□□□□ -0.99
ECHDC1-206ENST00000417628 TMEM2Q9UHN6 1383 aa8.86□□□□□ -0.99
ECHDC1-206ENST00000417628 CAMTA1Q9Y6Y1 1673 aa8.86□□□□□ -0.99
ECHDC1-206ENST00000417628 RALGAPBQ86X10 1494 aa8.86□□□□□ -0.99
ECHDC1-206ENST00000417628 COLQQ9Y215 455 aaPredicted RBP8.86□□□□□ -0.99
ECHDC1-206ENST00000417628 PTCH1Q13635 1447 aa8.86□□□□□ -0.99
ECHDC1-206ENST00000417628 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.85□□□□□ -0.99
ECHDC1-206ENST00000417628 ARHGAP35Q9NRY4 1499 aa8.85□□□□□ -0.99
ECHDC1-206ENST00000417628 G3V3G9 751 aa8.84□□□□□ -0.99
ECHDC1-206ENST00000417628 L3MBTL3Q96JM7 780 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-206ENST00000417628 GJD4Q96KN9 370 aaPredicted RBP8.84□□□□□ -0.99
ECHDC1-206ENST00000417628 FMN1Q68DA7 1419 aa8.83□□□□□ -1
ECHDC1-206ENST00000417628 POTEFA5A3E0 1075 aa8.82□□□□□ -1
ECHDC1-206ENST00000417628 GPR37O15354 613 aa8.82□□□□□ -1
ECHDC1-206ENST00000417628 AK7Q96M32 723 aa8.82□□□□□ -1
ECHDC1-206ENST00000417628 C19orf44Q9H6X5 657 aa8.82□□□□□ -1
ECHDC1-206ENST00000417628 PRELPP51888 382 aa8.81□□□□□ -1
ECHDC1-206ENST00000417628 MAP3K9P80192 1104 aa8.81□□□□□ -1
ECHDC1-206ENST00000417628 OXER1Q8TDS5 423 aa8.81□□□□□ -1
ECHDC1-206ENST00000417628 GLI3P10071 1580 aa8.81□□□□□ -1
ECHDC1-206ENST00000417628 DCCP43146 1447 aa8.8□□□□□ -1
ECHDC1-206ENST00000417628 EFCAB6Q5THR3 1501 aa8.8□□□□□ -1
ECHDC1-206ENST00000417628 EN1Q05925 392 aaPredicted RBP8.8□□□□□ -1
ECHDC1-206ENST00000417628 PIK3C2BO00750 1634 aa8.8□□□□□ -1
ECHDC1-206ENST00000417628 GRXCR2A6NFK2 248 aa8.79□□□□□ -1
ECHDC1-206ENST00000417628 SEC24BO95487 1268 aa8.79□□□□□ -1
ECHDC1-206ENST00000417628 KRI1Q8N9T8 703 aaKnown RBP8.79□□□□□ -1
ECHDC1-206ENST00000417628 BRWD3Q6RI45 1802 aa8.79□□□□□ -1
ECHDC1-206ENST00000417628 DISP2A7MBM2 1401 aa8.79□□□□□ -1
ECHDC1-206ENST00000417628 TNKS1BP1Q9C0C2 1729 aaKnown RBP8.78□□□□□ -1
ECHDC1-206ENST00000417628 SPON1Q9HCB6 807 aa8.78□□□□□ -1
ECHDC1-206ENST00000417628 CHD2O14647 1828 aaKnown RBP8.77□□□□□ -1
ECHDC1-206ENST00000417628 POTEIP0CG38 1075 aa8.77□□□□□ -1.01
ECHDC1-206ENST00000417628 OSBPP22059 807 aa8.77□□□□□ -1.01
ECHDC1-206ENST00000417628 SEPT12Q8IYM1 358 aa8.77□□□□□ -1.01
ECHDC1-206ENST00000417628 GPBP1L1Q9HC44 474 aaPredicted RBP8.77□□□□□ -1.01
ECHDC1-206ENST00000417628 MST1RQ04912 1400 aa8.77□□□□□ -1.01
ECHDC1-206ENST00000417628 RGPD1P0DJD0 1748 aa8.77□□□□□ -1.01
ECHDC1-206ENST00000417628 TRIM66O15016 1216 aa8.76□□□□□ -1.01
ECHDC1-206ENST00000417628 PTGER2P43116 358 aa8.76□□□□□ -1.01
ECHDC1-206ENST00000417628 KRT27Q7Z3Y8 459 aa8.76□□□□□ -1.01
ECHDC1-206ENST00000417628 SLC39A7Q92504 469 aa8.76□□□□□ -1.01
ECHDC1-206ENST00000417628 DDX17Q92841 729 aaKnown RBP8.76□□□□□ -1.01
ECHDC1-206ENST00000417628 LRRIQ1Q96JM4 1722 aa8.76□□□□□ -1.01
ECHDC1-206ENST00000417628 CEP350Q5VT06 3117 aa8.75□□□□□ -1.01
ECHDC1-206ENST00000417628 ADGRB2O60241 1585 aa8.75□□□□□ -1.01
ECHDC1-206ENST00000417628 C7P10643 843 aa8.75□□□□□ -1.01
ECHDC1-206ENST00000417628 CFDP1Q9UEE9 299 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-206ENST00000417628 COL22A1Q8NFW1 1626 aaPredicted RBP8.75□□□□□ -1.01
ECHDC1-206ENST00000417628 MYOM2P54296 1465 aa8.75□□□□□ -1.01
ECHDC1-206ENST00000417628 KCNQ2O43526 872 aa8.74□□□□□ -1.01
ECHDC1-206ENST00000417628 PPP1R15AO75807 674 aaPredicted RBP8.74□□□□□ -1.01
ECHDC1-206ENST00000417628 HSPA6P17066 643 aa8.74□□□□□ -1.01
ECHDC1-206ENST00000417628 PRIM1P49642 420 aaKnown RBP8.74□□□□□ -1.01
ECHDC1-206ENST00000417628 CCDC18Q5T9S5 1454 aa8.74□□□□□ -1.01
ECHDC1-206ENST00000417628 MBD5Q9P267 1494 aa8.73□□□□□ -1.01
ECHDC1-206ENST00000417628 NUTM2FA1L443 756 aa8.73□□□□□ -1.01
ECHDC1-206ENST00000417628 DDX12PQ92771 950 aa8.73□□□□□ -1.01
ECHDC1-206ENST00000417628 ADGRB3O60242 1522 aa8.73□□□□□ -1.01
ECHDC1-206ENST00000417628 PLEKHG1Q9ULL1 1385 aa8.73□□□□□ -1.01
ECHDC1-206ENST00000417628 CHD4Q14839 1912 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 EVI5O60447 810 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 PDE4DQ08499 809 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 EZH2Q15910 746 aaKnown RBP8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 COL13A1Q5TAT6 717 aaPredicted RBP8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 ERICH6Q7L0X2 663 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 UNC5CLQ8IV45 518 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 TNS4Q8IZW8 715 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 METRNQ9UJH8 293 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 PARD3Q8TEW0 1356 aa8.72□□□□□ -1.01
ECHDC1-206ENST00000417628 CEP152O94986 1710 aa8.71□□□□□ -1.01
ECHDC1-206ENST00000417628 TNS1Q9HBL0 1735 aaKnown RBP8.71□□□□□ -1.01
ECHDC1-206ENST00000417628 MARF1Q9Y4F3 1742 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms