RNA–Protein interactions for RNA: ENST00000417389.1

TM9SF4-203, Transcript of transmembrane 9 superfamily member 4, humanhuman

TSL 4

Gene TM9SF4, Length 553 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF4-203ENST00000417389 USP21Q9UK80 565 aa15.51■□□□□ 0.07
TM9SF4-203ENST00000417389 SBNO2Q9Y2G9 1366 aa15.5■□□□□ 0.07
TM9SF4-203ENST00000417389 SLC24A1O60721 1099 aa15.5■□□□□ 0.07
TM9SF4-203ENST00000417389 RXRBP28702 533 aa15.49■□□□□ 0.07
TM9SF4-203ENST00000417389 QTRT2Q9H974 415 aaKnown RBP15.49■□□□□ 0.07
TM9SF4-203ENST00000417389 TMF1P82094 1093 aa15.48■□□□□ 0.07
TM9SF4-203ENST00000417389 TRPM3Q9HCF6 1732 aaPredicted RBP15.48■□□□□ 0.07
TM9SF4-203ENST00000417389 HDGFL2Q7Z4V5 671 aaPredicted RBP15.47■□□□□ 0.07
TM9SF4-203ENST00000417389 ZNF692Q9BU19 519 aaPredicted RBP15.47■□□□□ 0.07
TM9SF4-203ENST00000417389 ZBTB7CA1YPR0 619 aa15.46■□□□□ 0.07
TM9SF4-203ENST00000417389 TESK2Q96S53 571 aa15.46■□□□□ 0.07
TM9SF4-203ENST00000417389 POLR3GLQ9BT43 218 aa15.46■□□□□ 0.07
TM9SF4-203ENST00000417389 CCDC9Q9Y3X0 531 aaKnown RBP15.46■□□□□ 0.07
TM9SF4-203ENST00000417389 KTN1Q86UP2 1357 aaKnown RBP15.46■□□□□ 0.07
TM9SF4-203ENST00000417389 USP6P35125 1406 aa15.45■□□□□ 0.06
TM9SF4-203ENST00000417389 SOCS7O14512 581 aa15.45■□□□□ 0.06
TM9SF4-203ENST00000417389 NLRP6P59044 892 aa15.45■□□□□ 0.06
TM9SF4-203ENST00000417389 NLRP13Q86W25 1043 aa15.45■□□□□ 0.06
TM9SF4-203ENST00000417389 FNBP4Q8N3X1 1017 aaPredicted RBP15.45■□□□□ 0.06
TM9SF4-203ENST00000417389 PRDM11Q9NQV5 511 aa15.45■□□□□ 0.06
TM9SF4-203ENST00000417389 TRPC5Q9UL62 973 aaPredicted RBP15.45■□□□□ 0.06
TM9SF4-203ENST00000417389 ALS2Q96Q42 1657 aa15.44■□□□□ 0.06
TM9SF4-203ENST00000417389 ZC3H6P61129 1189 aaKnown RBP15.44■□□□□ 0.06
TM9SF4-203ENST00000417389 CDCA8Q53HL2 280 aa15.44■□□□□ 0.06
TM9SF4-203ENST00000417389 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.44■□□□□ 0.063e-6■■□□□ 14
TM9SF4-203ENST00000417389 SLC12A5Q9H2X9 1139 aa15.44■□□□□ 0.06
TM9SF4-203ENST00000417389 TERF2IPQ9NYB0 399 aa15.44■□□□□ 0.06
TM9SF4-203ENST00000417389 RBM6P78332 1123 aaKnown RBP15.43■□□□□ 0.06
TM9SF4-203ENST00000417389 EIF4G2P78344 907 aaKnown RBP eCLIP15.43■□□□□ 0.062e-10■■■■□ 24
TM9SF4-203ENST00000417389 BRD4O60885 1362 aaPredicted RBP15.43■□□□□ 0.06
TM9SF4-203ENST00000417389 SOX12O15370 315 aa15.42■□□□□ 0.06
TM9SF4-203ENST00000417389 UNC5CLQ8IV45 518 aa15.42■□□□□ 0.06
TM9SF4-203ENST00000417389 MARF1Q9Y4F3 1742 aaKnown RBP15.42■□□□□ 0.06
TM9SF4-203ENST00000417389 TTC21BQ7Z4L5 1316 aa15.42■□□□□ 0.06
TM9SF4-203ENST00000417389 FAM83GA6ND36 823 aa15.41■□□□□ 0.06
TM9SF4-203ENST00000417389 PUS7Q96PZ0 661 aaKnown RBP15.41■□□□□ 0.06
TM9SF4-203ENST00000417389 BTG4Q9NY30 223 aa15.41■□□□□ 0.06
TM9SF4-203ENST00000417389 ABCA3Q99758 1704 aa15.4■□□□□ 0.06
TM9SF4-203ENST00000417389 CHRNA2Q15822 529 aa15.4■□□□□ 0.06
TM9SF4-203ENST00000417389 KIAA0232Q92628 1395 aa15.39■□□□□ 0.05
TM9SF4-203ENST00000417389 A0A0G2JS52 829 aa15.39■□□□□ 0.05
TM9SF4-203ENST00000417389 HSPA5P11021 654 aaKnown RBP15.39■□□□□ 0.05
TM9SF4-203ENST00000417389 MYT1Q01538 1121 aa15.39■□□□□ 0.05
TM9SF4-203ENST00000417389 TTC21AQ8NDW8 1320 aa15.39■□□□□ 0.05
TM9SF4-203ENST00000417389 NINLQ9Y2I6 1382 aa15.38■□□□□ 0.05
TM9SF4-203ENST00000417389 CPSF1Q10570 1443 aaKnown RBP15.38■□□□□ 0.05
TM9SF4-203ENST00000417389 GCP02774 474 aa15.38■□□□□ 0.05
TM9SF4-203ENST00000417389 BCL9LQ86UU0 1499 aa15.38■□□□□ 0.05
TM9SF4-203ENST00000417389 SLIT2O94813 1529 aa15.38■□□□□ 0.05
TM9SF4-203ENST00000417389 EVA1CP58658 441 aa15.37■□□□□ 0.05
TM9SF4-203ENST00000417389 GJD4Q96KN9 370 aaPredicted RBP15.37■□□□□ 0.05
TM9SF4-203ENST00000417389 STRN4Q9NRL3 753 aa15.37■□□□□ 0.05
TM9SF4-203ENST00000417389 A0A1W2PP64 1363 aa15.36■□□□□ 0.05
TM9SF4-203ENST00000417389 ATRNO75882 1429 aa15.36■□□□□ 0.05
TM9SF4-203ENST00000417389 USP19O94966 1318 aa15.36■□□□□ 0.05
TM9SF4-203ENST00000417389 AKAP12Q02952 1782 aa15.36■□□□□ 0.05
TM9SF4-203ENST00000417389 PHRF1Q9P1Y6 1649 aaKnown RBP15.35■□□□□ 0.05
TM9SF4-203ENST00000417389 SSH2Q76I76 1423 aa15.35■□□□□ 0.05
TM9SF4-203ENST00000417389 NME9Q86XW9 330 aa15.35■□□□□ 0.05
TM9SF4-203ENST00000417389 PLCH1Q4KWH8 1693 aa15.35■□□□□ 0.05
TM9SF4-203ENST00000417389 EDC4Q6P2E9 1401 aaKnown RBP15.34■□□□□ 0.05
TM9SF4-203ENST00000417389 COL14A1Q05707 1796 aaKnown RBP15.34■□□□□ 0.05
TM9SF4-203ENST00000417389 VPS72Q15906 364 aa15.34■□□□□ 0.05
TM9SF4-203ENST00000417389 KCNH5Q8NCM2 988 aa15.34■□□□□ 0.05
TM9SF4-203ENST00000417389 ZRANB1Q9UGI0 708 aa15.34■□□□□ 0.05
TM9SF4-203ENST00000417389 CD163L1Q9NR16 1453 aa15.33■□□□□ 0.05
TM9SF4-203ENST00000417389 PIK3C2AO00443 1686 aa15.33■□□□□ 0.04
TM9SF4-203ENST00000417389 CRYBG1Q9Y4K1 1723 aa15.33■□□□□ 0.04
TM9SF4-203ENST00000417389 RGS12O14924 1447 aa15.33■□□□□ 0.04
TM9SF4-203ENST00000417389 NRKQ7Z2Y5 1582 aa15.32■□□□□ 0.04
TM9SF4-203ENST00000417389 MON2Q7Z3U7 1717 aa15.32■□□□□ 0.04
TM9SF4-203ENST00000417389 USP35Q9P2H5 1018 aa15.32■□□□□ 0.04
TM9SF4-203ENST00000417389 ANKRD36BQ8N2N9 1353 aa15.32■□□□□ 0.04
TM9SF4-203ENST00000417389 CDK12Q9NYV4 1490 aaPredicted RBP15.32■□□□□ 0.04
TM9SF4-203ENST00000417389 NWD2Q9ULI1 1742 aa15.31■□□□□ 0.04
TM9SF4-203ENST00000417389 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.31■□□□□ 0.04
TM9SF4-203ENST00000417389 CPDO75976 1380 aa15.3■□□□□ 0.04
TM9SF4-203ENST00000417389 FAM98CQ17RN3 349 aaKnown RBP15.3■□□□□ 0.04
TM9SF4-203ENST00000417389 COG3Q96JB2 828 aa15.3■□□□□ 0.04
TM9SF4-203ENST00000417389 CSB-PGBD3P0DP91 1061 aa15.29■□□□□ 0.04
TM9SF4-203ENST00000417389 SLIT3O75094 1523 aa15.28■□□□□ 0.04
TM9SF4-203ENST00000417389 SEPT12Q8IYM1 358 aa15.28■□□□□ 0.04
TM9SF4-203ENST00000417389 SPATA31A5Q5VU36 1347 aa15.27■□□□□ 0.04
TM9SF4-203ENST00000417389 SPATA31A7Q8IWB4 1347 aa15.27■□□□□ 0.04
TM9SF4-203ENST00000417389 GGNBP2Q9H3C7 697 aa15.27■□□□□ 0.04
TM9SF4-203ENST00000417389 GLI3P10071 1580 aa15.27■□□□□ 0.03
TM9SF4-203ENST00000417389 USP31Q70CQ4 1352 aa15.26■□□□□ 0.03
TM9SF4-203ENST00000417389 LARP1Q6PKG0 1096 aaKnown RBP15.26■□□□□ 0.03
TM9SF4-203ENST00000417389 TOM1L2Q6ZVM7 507 aa15.26■□□□□ 0.03
TM9SF4-203ENST00000417389 ARHGEF25Q86VW2 580 aa15.26■□□□□ 0.03
TM9SF4-203ENST00000417389 NRAPQ86VF7 1730 aa15.26■□□□□ 0.03
TM9SF4-203ENST00000417389 AATKQ6ZMQ8 1374 aa15.25■□□□□ 0.03
TM9SF4-203ENST00000417389 CAMTA1Q9Y6Y1 1673 aa15.25■□□□□ 0.03
TM9SF4-203ENST00000417389 NSD3Q9BZ95 1437 aa15.25■□□□□ 0.03
TM9SF4-203ENST00000417389 SPATA31A1Q5TZJ5 1347 aa15.24■□□□□ 0.03
TM9SF4-203ENST00000417389 AXIN2Q9Y2T1 843 aa15.23■□□□□ 0.03
TM9SF4-203ENST00000417389 COL5A2P05997 1499 aaPredicted RBP15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 FYB1O15117 783 aa15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 AMPHP49418 695 aa15.22■□□□□ 0.03
TM9SF4-203ENST00000417389 KRT27Q7Z3Y8 459 aa15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms