RNA–Protein interactions for RNA: ENST00000416842.1

AP001042.1-201, humanhuman

TSL 3 BASIC

Gene AP001042.1, Length 487 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AP001042.1-201ENST00000416842 ABCA3Q99758 1704 aa11.21□□□□□ -0.61
AP001042.1-201ENST00000416842 ESCO1Q5FWF5 840 aa11.21□□□□□ -0.61
AP001042.1-201ENST00000416842 SEPT12Q8IYM1 358 aa11.21□□□□□ -0.61
AP001042.1-201ENST00000416842 EIF3AQ14152 1382 aaKnown RBP11.2□□□□□ -0.62
AP001042.1-201ENST00000416842 FOXO3O43524 673 aa11.2□□□□□ -0.62
AP001042.1-201ENST00000416842 TMF1P82094 1093 aa11.2□□□□□ -0.62
AP001042.1-201ENST00000416842 LRPPRCP42704 1394 aaKnown RBP11.19□□□□□ -0.62
AP001042.1-201ENST00000416842 RGPD8O14715 1765 aaPredicted RBP11.19□□□□□ -0.62
AP001042.1-201ENST00000416842 FMN2Q9NZ56 1722 aa11.19□□□□□ -0.62
AP001042.1-201ENST00000416842 PER1O15534 1290 aaPredicted RBP11.19□□□□□ -0.62
AP001042.1-201ENST00000416842 KIF1AQ12756 1690 aa11.19□□□□□ -0.62
AP001042.1-201ENST00000416842 YTHDC2Q9H6S0 1430 aaKnown RBP11.18□□□□□ -0.62
AP001042.1-201ENST00000416842 TNS1Q9HBL0 1735 aaKnown RBP11.18□□□□□ -0.62
AP001042.1-201ENST00000416842 CENPJQ9HC77 1338 aaPredicted RBP11.18□□□□□ -0.62
AP001042.1-201ENST00000416842 TRAK1Q9UPV9 953 aa11.18□□□□□ -0.62
AP001042.1-201ENST00000416842 NRAPQ86VF7 1730 aa11.18□□□□□ -0.62
AP001042.1-201ENST00000416842 ONECUT3O60422 494 aaPredicted RBP11.17□□□□□ -0.62
AP001042.1-201ENST00000416842 BAG6P46379 1132 aa11.17□□□□□ -0.62
AP001042.1-201ENST00000416842 VPS72Q15906 364 aa11.17□□□□□ -0.62
AP001042.1-201ENST00000416842 CDCA8Q53HL2 280 aa11.17□□□□□ -0.62
AP001042.1-201ENST00000416842 KRT27Q7Z3Y8 459 aa11.17□□□□□ -0.62
AP001042.1-201ENST00000416842 DLC1Q96QB1 1528 aa11.17□□□□□ -0.62
AP001042.1-201ENST00000416842 TECPR2O15040 1411 aa11.17□□□□□ -0.62
AP001042.1-201ENST00000416842 SPATA31A3Q5VYP0 1347 aa11.16□□□□□ -0.62
AP001042.1-201ENST00000416842 KNDC1Q76NI1 1749 aa11.15□□□□□ -0.63
AP001042.1-201ENST00000416842 NUTM2FA1L443 756 aa11.14□□□□□ -0.63
AP001042.1-201ENST00000416842 CCER2I3L3R5 266 aa11.14□□□□□ -0.63
AP001042.1-201ENST00000416842 EN1Q05925 392 aaPredicted RBP11.14□□□□□ -0.63
AP001042.1-201ENST00000416842 R3HDM1Q15032 1099 aaKnown RBP11.14□□□□□ -0.63
AP001042.1-201ENST00000416842 CCDC9Q9Y3X0 531 aaKnown RBP11.14□□□□□ -0.63
AP001042.1-201ENST00000416842 DISP2A7MBM2 1401 aa11.12□□□□□ -0.63
AP001042.1-201ENST00000416842 TNS3Q68CZ2 1445 aa11.12□□□□□ -0.63
AP001042.1-201ENST00000416842 YY1P25490 414 aa11.12□□□□□ -0.63
AP001042.1-201ENST00000416842 CABLES1Q8TDN4 633 aa11.12□□□□□ -0.63
AP001042.1-201ENST00000416842 PRAM1Q96QH2 718 aa11.12□□□□□ -0.63
AP001042.1-201ENST00000416842 PRKRIP1Q9H875 184 aaPredicted RBP11.12□□□□□ -0.63
AP001042.1-201ENST00000416842 ANP32CO43423 234 aa11.11□□□□□ -0.63
AP001042.1-201ENST00000416842 KRT28Q7Z3Y7 464 aa11.11□□□□□ -0.63
AP001042.1-201ENST00000416842 PANK3Q9H999 370 aa11.11□□□□□ -0.63
AP001042.1-201ENST00000416842 STK26Q9P289 416 aa11.11□□□□□ -0.63
AP001042.1-201ENST00000416842 THSD7AQ9UPZ6 1657 aa11.11□□□□□ -0.63
AP001042.1-201ENST00000416842 ARHGEF28Q8N1W1 1705 aaKnown RBP11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 A0A0G2JS52 829 aa11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 PLEKHG5O94827 1062 aa11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 HAP1P54257 671 aaPredicted RBP11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 MYT1Q01538 1121 aa11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 FAM182BQ5T319 152 aa11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 WAPLQ7Z5K2 1190 aa11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 PLEKHH1Q9ULM0 1364 aa11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 RREB1Q92766 1687 aa11.1□□□□□ -0.63
AP001042.1-201ENST00000416842 EVC2Q86UK5 1308 aa11.09□□□□□ -0.63
AP001042.1-201ENST00000416842 NUP188Q5SRE5 1749 aa11.09□□□□□ -0.63
AP001042.1-201ENST00000416842 COL14A1Q05707 1796 aaKnown RBP11.09□□□□□ -0.63
AP001042.1-201ENST00000416842 ADGRB2O60241 1585 aa11.09□□□□□ -0.63
AP001042.1-201ENST00000416842 NPC1L1Q9UHC9 1359 aa11.09□□□□□ -0.63
AP001042.1-201ENST00000416842 FAM98CQ17RN3 349 aaKnown RBP11.09□□□□□ -0.63
AP001042.1-201ENST00000416842 KTN1Q86UP2 1357 aaKnown RBP11.08□□□□□ -0.64
AP001042.1-201ENST00000416842 FAM83GA6ND36 823 aa11.08□□□□□ -0.64
AP001042.1-201ENST00000416842 CARD14Q9BXL6 1004 aa11.08□□□□□ -0.64
AP001042.1-201ENST00000416842 TRPM3Q9HCF6 1732 aaPredicted RBP11.08□□□□□ -0.64
AP001042.1-201ENST00000416842 TULP4Q9NRJ4 1543 aa11.08□□□□□ -0.64
AP001042.1-201ENST00000416842 CRYBG1Q9Y4K1 1723 aa11.07□□□□□ -0.64
AP001042.1-201ENST00000416842 EZH2Q15910 746 aaKnown RBP11.07□□□□□ -0.64
AP001042.1-201ENST00000416842 AMER1Q5JTC6 1135 aaPredicted RBP11.07□□□□□ -0.64
AP001042.1-201ENST00000416842 POGKQ9P215 609 aa11.07□□□□□ -0.64
AP001042.1-201ENST00000416842 SBNO1A3KN83 1393 aa11.06□□□□□ -0.64
AP001042.1-201ENST00000416842 ALS2Q96Q42 1657 aa11.06□□□□□ -0.64
AP001042.1-201ENST00000416842 CAMTA1Q9Y6Y1 1673 aa11.06□□□□□ -0.64
AP001042.1-201ENST00000416842 RALBP1Q15311 655 aa11.06□□□□□ -0.64
AP001042.1-201ENST00000416842 CDK19Q9BWU1 502 aa11.06□□□□□ -0.64
AP001042.1-201ENST00000416842 ARHGEF10O15013 1369 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 NINLQ9Y2I6 1382 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 QRICH2Q9H0J4 1663 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 WASLO00401 505 aaPredicted RBP11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 PSME1Q06323 249 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 CAMKK2Q96RR4 588 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 POLR3GLQ9BT43 218 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 SLC12A5Q9H2X9 1139 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
AP001042.1-201ENST00000416842 PARD3Q8TEW0 1356 aa11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 NCBP3Q53F19 620 aaKnown RBP11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 LMOD2Q6P5Q4 547 aa11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 CABP2Q9NPB3 220 aa11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 BTG4Q9NY30 223 aa11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 SPATA31A5Q5VU36 1347 aa11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 SPATA31A7Q8IWB4 1347 aa11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 MINK1Q8N4C8 1332 aaPredicted RBP11.04□□□□□ -0.64
AP001042.1-201ENST00000416842 POTEHQ6S545 545 aa11.03□□□□□ -0.64
AP001042.1-201ENST00000416842 MYOM1P52179 1685 aa11.02□□□□□ -0.64
AP001042.1-201ENST00000416842 SAFB2Q14151 953 aaKnown RBP eCLIP11.02□□□□□ -0.65
AP001042.1-201ENST00000416842 CCDC184Q52MB2 194 aa11.02□□□□□ -0.65
AP001042.1-201ENST00000416842 TRIM37O94972 964 aa11.01□□□□□ -0.65
AP001042.1-201ENST00000416842 KNSTRNQ9Y448 316 aa11.01□□□□□ -0.65
AP001042.1-201ENST00000416842 ANKRD36BQ8N2N9 1353 aa11.01□□□□□ -0.65
AP001042.1-201ENST00000416842 CD163L1Q9NR16 1453 aa11□□□□□ -0.65
AP001042.1-201ENST00000416842 PLEKHG3A1L390 1219 aa11□□□□□ -0.65
AP001042.1-201ENST00000416842 CHD4Q14839 1912 aa10.99□□□□□ -0.65
AP001042.1-201ENST00000416842 APBA3O96018 575 aa10.99□□□□□ -0.65
AP001042.1-201ENST00000416842 SRPK2P78362 688 aaKnown RBP10.99□□□□□ -0.65
AP001042.1-201ENST00000416842 FAM196AQ6ZSG2 479 aa10.99□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms