RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 MYT1Q01538 1121 aa20.94■□□□□ 0.94
PAF1-202ENST00000416728 CDK19Q9BWU1 502 aa20.94■□□□□ 0.94
PAF1-202ENST00000416728 KRT27Q7Z3Y8 459 aa20.93■□□□□ 0.94
PAF1-202ENST00000416728 SF3B2Q13435 895 aaKnown RBP20.92■□□□□ 0.94
PAF1-202ENST00000416728 PRDM11Q9NQV5 511 aa20.92■□□□□ 0.94
PAF1-202ENST00000416728 FAM98CQ17RN3 349 aaKnown RBP20.91■□□□□ 0.94
PAF1-202ENST00000416728 COL14A1Q05707 1796 aaKnown RBP20.91■□□□□ 0.94
PAF1-202ENST00000416728 NBPF1Q3BBV0 1214 aa20.9■□□□□ 0.94
PAF1-202ENST00000416728 CCDC61Q9Y6R9 512 aa20.9■□□□□ 0.94
PAF1-202ENST00000416728 ITSN1Q15811 1721 aa20.9■□□□□ 0.94
PAF1-202ENST00000416728 BRWD3Q6RI45 1802 aa20.89■□□□□ 0.94
PAF1-202ENST00000416728 NRAPQ86VF7 1730 aa20.89■□□□□ 0.93
PAF1-202ENST00000416728 KIAA1210Q9ULL0 1709 aa20.89■□□□□ 0.93
PAF1-202ENST00000416728 DEFB132Q7Z7B7 95 aa20.88■□□□□ 0.93
PAF1-202ENST00000416728 ACEP12821 1306 aa20.88■□□□□ 0.93
PAF1-202ENST00000416728 POLR3AO14802 1390 aaPredicted RBP20.88■□□□□ 0.93
PAF1-202ENST00000416728 NBPF8Q3BBV2 869 aa20.86■□□□□ 0.93
PAF1-202ENST00000416728 SPATA31A5Q5VU36 1347 aa20.86■□□□□ 0.93
PAF1-202ENST00000416728 SPATA31A7Q8IWB4 1347 aa20.86■□□□□ 0.93
PAF1-202ENST00000416728 KIAA0232Q92628 1395 aa20.86■□□□□ 0.93
PAF1-202ENST00000416728 PLEKHG3A1L390 1219 aa20.85■□□□□ 0.93
PAF1-202ENST00000416728 NUTM2GQ5VZR2 741 aa20.85■□□□□ 0.93
PAF1-202ENST00000416728 CRYBG1Q9Y4K1 1723 aa20.85■□□□□ 0.93
PAF1-202ENST00000416728 CENPJQ9HC77 1338 aaPredicted RBP20.84■□□□□ 0.93
PAF1-202ENST00000416728 SRPK2P78362 688 aaKnown RBP20.84■□□□□ 0.93
PAF1-202ENST00000416728 CHRNA2Q15822 529 aa20.84■□□□□ 0.93
PAF1-202ENST00000416728 TOPAZ1Q8N9V7 1692 aa20.83■□□□□ 0.92
PAF1-202ENST00000416728 ZC3H6P61129 1189 aaKnown RBP20.83■□□□□ 0.92
PAF1-202ENST00000416728 SRCAPQ6ZRS2 3230 aa20.81■□□□□ 0.92
PAF1-202ENST00000416728 BAG6P46379 1132 aa20.81■□□□□ 0.92
PAF1-202ENST00000416728 ABTB2Q8N961 1025 aa20.81■□□□□ 0.92
PAF1-202ENST00000416728 STRN4Q9NRL3 753 aa20.81■□□□□ 0.92
PAF1-202ENST00000416728 PPIP5K1Q6PFW1 1433 aa20.8■□□□□ 0.92
PAF1-202ENST00000416728 PHRF1Q9P1Y6 1649 aaKnown RBP20.79■□□□□ 0.92
PAF1-202ENST00000416728 SPATA31A1Q5TZJ5 1347 aa20.79■□□□□ 0.92
PAF1-202ENST00000416728 L3MBTL2Q969R5 705 aa20.79■□□□□ 0.92
PAF1-202ENST00000416728 CABP2Q9NPB3 220 aa20.79■□□□□ 0.92
PAF1-202ENST00000416728 FAM182BQ5T319 152 aa20.77■□□□□ 0.92
PAF1-202ENST00000416728 USP19O94966 1318 aa20.76■□□□□ 0.91
PAF1-202ENST00000416728 EVA1CP58658 441 aa20.76■□□□□ 0.91
PAF1-202ENST00000416728 NLRP13Q86W25 1043 aa20.76■□□□□ 0.91
PAF1-202ENST00000416728 THSD7AQ9UPZ6 1657 aa20.76■□□□□ 0.91
PAF1-202ENST00000416728 SIN3AQ96ST3 1273 aa20.74■□□□□ 0.91
PAF1-202ENST00000416728 USP35Q9P2H5 1018 aa20.74■□□□□ 0.91
PAF1-202ENST00000416728 SSH2Q76I76 1423 aa20.74■□□□□ 0.91
PAF1-202ENST00000416728 NRKQ7Z2Y5 1582 aa20.74■□□□□ 0.91
PAF1-202ENST00000416728 BRD4O60885 1362 aaPredicted RBP20.74■□□□□ 0.91
PAF1-202ENST00000416728 CPDO75976 1380 aa20.74■□□□□ 0.91
PAF1-202ENST00000416728 GCP02774 474 aa20.72■□□□□ 0.91
PAF1-202ENST00000416728 CABP1Q9NZU7 370 aa20.72■□□□□ 0.91
PAF1-202ENST00000416728 QRICH2Q9H0J4 1663 aa20.72■□□□□ 0.91
PAF1-202ENST00000416728 EN1Q05925 392 aaPredicted RBP20.72■□□□□ 0.91
PAF1-202ENST00000416728 NEUROD1Q13562 356 aa20.72■□□□□ 0.91
PAF1-202ENST00000416728 EVC2Q86UK5 1308 aa20.71■□□□□ 0.91
PAF1-202ENST00000416728 LARP1Q6PKG0 1096 aaKnown RBP20.71■□□□□ 0.91
PAF1-202ENST00000416728 BARGINQ6ZT62 677 aa20.71■□□□□ 0.91
PAF1-202ENST00000416728 CAMTA1Q9Y6Y1 1673 aa20.7■□□□□ 0.9
PAF1-202ENST00000416728 USP6P35125 1406 aa20.7■□□□□ 0.9
PAF1-202ENST00000416728 FAM196AQ6ZSG2 479 aa20.7■□□□□ 0.9
PAF1-202ENST00000416728 ROCK2O75116 1388 aaKnown RBP20.7■□□□□ 0.9
PAF1-202ENST00000416728 RGPD1P0DJD0 1748 aa20.68■□□□□ 0.9
PAF1-202ENST00000416728 DISP2A7MBM2 1401 aa20.68■□□□□ 0.9
PAF1-202ENST00000416728 NLRP6P59044 892 aa20.68■□□□□ 0.9
PAF1-202ENST00000416728 PDE3BQ13370 1112 aa20.68■□□□□ 0.9
PAF1-202ENST00000416728 TCP11L2Q8N4U5 519 aa20.68■□□□□ 0.9
PAF1-202ENST00000416728 PSDA5PKW4 1024 aaPredicted RBP20.67■□□□□ 0.9
PAF1-202ENST00000416728 LMO7Q8WWI1 1683 aa20.67■□□□□ 0.9
PAF1-202ENST00000416728 TRPM1Q7Z4N2 1603 aa20.66■□□□□ 0.9
PAF1-202ENST00000416728 ZBTB7CA1YPR0 619 aa20.66■□□□□ 0.9
PAF1-202ENST00000416728 TRIM37O94972 964 aa20.66■□□□□ 0.9
PAF1-202ENST00000416728 THRAP3Q9Y2W1 955 aaKnown RBP20.65■□□□□ 0.9
PAF1-202ENST00000416728 COL5A2P05997 1499 aaPredicted RBP20.65■□□□□ 0.9
PAF1-202ENST00000416728 EZH2Q15910 746 aaKnown RBP20.62■□□□□ 0.89
PAF1-202ENST00000416728 ZNF692Q9BU19 519 aaPredicted RBP20.62■□□□□ 0.89
PAF1-202ENST00000416728 SLIT3O75094 1523 aa20.62■□□□□ 0.89
PAF1-202ENST00000416728 AATKQ6ZMQ8 1374 aa20.62■□□□□ 0.89
PAF1-202ENST00000416728 TNS1Q9HBL0 1735 aaKnown RBP20.62■□□□□ 0.89
PAF1-202ENST00000416728 APBA3O96018 575 aa20.61■□□□□ 0.89
PAF1-202ENST00000416728 CRB1P82279 1406 aa20.61■□□□□ 0.89
PAF1-202ENST00000416728 R3HDM1Q15032 1099 aaKnown RBP20.6■□□□□ 0.89
PAF1-202ENST00000416728 CAMKK2Q96RR4 588 aa20.6■□□□□ 0.89
PAF1-202ENST00000416728 LRP5O75197 1615 aa20.6■□□□□ 0.89
PAF1-202ENST00000416728 TTC21BQ7Z4L5 1316 aa20.59■□□□□ 0.89
PAF1-202ENST00000416728 PARD3Q8TEW0 1356 aa20.59■□□□□ 0.89
PAF1-202ENST00000416728 TTC21AQ8NDW8 1320 aa20.58■□□□□ 0.88
PAF1-202ENST00000416728 PIK3C2AO00443 1686 aa20.58■□□□□ 0.88
PAF1-202ENST00000416728 TOM1L2Q6ZVM7 507 aa20.57■□□□□ 0.88
PAF1-202ENST00000416728 KCNH5Q8NCM2 988 aa20.57■□□□□ 0.88
PAF1-202ENST00000416728 C11orf95C9JLR9 678 aaPredicted RBP20.56■□□□□ 0.88
PAF1-202ENST00000416728 CPSF1Q10570 1443 aaKnown RBP20.55■□□□□ 0.88
PAF1-202ENST00000416728 KTN1Q86UP2 1357 aaKnown RBP20.55■□□□□ 0.88
PAF1-202ENST00000416728 SOX12O15370 315 aa20.55■□□□□ 0.88
PAF1-202ENST00000416728 ARHGEF25Q86VW2 580 aa20.55■□□□□ 0.88
PAF1-202ENST00000416728 CARD11Q9BXL7 1154 aa20.55■□□□□ 0.88
PAF1-202ENST00000416728 SBNO2Q9Y2G9 1366 aa20.54■□□□□ 0.88
PAF1-202ENST00000416728 WDR17Q8IZU2 1322 aa20.54■□□□□ 0.88
PAF1-202ENST00000416728 AXIN2Q9Y2T1 843 aa20.54■□□□□ 0.88
PAF1-202ENST00000416728 PARP4Q9UKK3 1724 aaKnown RBP20.53■□□□□ 0.88
PAF1-202ENST00000416728 OVOS2A0A0G2JMS6 1433 aa20.53■□□□□ 0.88
PAF1-202ENST00000416728 OVOS2A0A0J9YW53 1432 aa20.53■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 92.9 ms