RNA–Protein interactions for RNA: ENST00000416372.5

RTN4R-202, Transcript of reticulon 4 receptor, humanhuman

APPRIS ALT2 TSL 3

Gene RTN4R, Length 1,777 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4R-202ENST00000416372 USP6P35125 1406 aa24.04■■□□□ 1.44
RTN4R-202ENST00000416372 SHPRHQ149N8 1683 aa24.04■■□□□ 1.44
RTN4R-202ENST00000416372 NGDNQ8NEJ9 315 aaKnown RBP24.03■■□□□ 1.44
RTN4R-202ENST00000416372 LMTK3Q96Q04 1460 aa24.03■■□□□ 1.44
RTN4R-202ENST00000416372 SALL2Q9Y467 1007 aaPredicted RBP24.03■■□□□ 1.44
RTN4R-202ENST00000416372 TTC21BQ7Z4L5 1316 aa24.03■■□□□ 1.44
RTN4R-202ENST00000416372 PROSER2Q86WR7 435 aaPredicted RBP24.02■■□□□ 1.44
RTN4R-202ENST00000416372 COG3Q96JB2 828 aa24.02■■□□□ 1.44
RTN4R-202ENST00000416372 ZRANB1Q9UGI0 708 aa24.01■■□□□ 1.43
RTN4R-202ENST00000416372 CCDC146Q8IYE0 955 aa23.98■■□□□ 1.43
RTN4R-202ENST00000416372 SMG6Q86US8 1419 aaKnown RBP23.98■■□□□ 1.43
RTN4R-202ENST00000416372 SSH2Q76I76 1423 aa23.97■■□□□ 1.43
RTN4R-202ENST00000416372 TTC21AQ8NDW8 1320 aa23.96■■□□□ 1.43
RTN4R-202ENST00000416372 PDE3BQ13370 1112 aa23.95■■□□□ 1.42
RTN4R-202ENST00000416372 POLKQ9UBT6 870 aa23.95■■□□□ 1.42
RTN4R-202ENST00000416372 NUDCQ9Y266 331 aa23.95■■□□□ 1.42
RTN4R-202ENST00000416372 MAP2P11137 1827 aaKnown RBP23.95■■□□□ 1.42
RTN4R-202ENST00000416372 COL3A1P02461 1466 aaPredicted RBP23.94■■□□□ 1.42
RTN4R-202ENST00000416372 PHF8Q9UPP1 1060 aa23.94■■□□□ 1.42
RTN4R-202ENST00000416372 AATKQ6ZMQ8 1374 aa23.94■■□□□ 1.42
RTN4R-202ENST00000416372 FBLN1P23142 703 aa23.93■■□□□ 1.42
RTN4R-202ENST00000416372 STRCQ7RTU9 1775 aa23.93■■□□□ 1.42
RTN4R-202ENST00000416372 STRCP1A6NGW2 1772 aa23.92■■□□□ 1.42
RTN4R-202ENST00000416372 PPM1GO15355 546 aaPredicted RBP23.92■■□□□ 1.42
RTN4R-202ENST00000416372 PNPLA6Q8IY17 1366 aa23.92■■□□□ 1.42
RTN4R-202ENST00000416372 NEFLP07196 543 aa23.91■■□□□ 1.42
RTN4R-202ENST00000416372 U2AF1L5P0DN76 240 aaPredicted RBP23.91■■□□□ 1.42
RTN4R-202ENST00000416372 U2AF1Q01081 240 aaKnown RBP eCLIP23.91■■□□□ 1.42
RTN4R-202ENST00000416372 SUPT16HQ9Y5B9 1047 aaKnown RBP23.91■■□□□ 1.42
RTN4R-202ENST00000416372 OVOS2A0A0J9YW53 1432 aa23.91■■□□□ 1.42
RTN4R-202ENST00000416372 OVOS2Q6IE36 1432 aa23.91■■□□□ 1.42
RTN4R-202ENST00000416372 APAF1O14727 1248 aa23.91■■□□□ 1.42
RTN4R-202ENST00000416372 DIAPH1O60610 1272 aaKnown RBP23.9■■□□□ 1.42
RTN4R-202ENST00000416372 ESCO1Q5FWF5 840 aa23.9■■□□□ 1.42
RTN4R-202ENST00000416372 U2SURPO15042 1029 aaKnown RBP23.89■■□□□ 1.42
RTN4R-202ENST00000416372 RUNDC1Q96C34 613 aa23.89■■□□□ 1.42
RTN4R-202ENST00000416372 C19orf44Q9H6X5 657 aa23.89■■□□□ 1.42
RTN4R-202ENST00000416372 EMILIN1Q9Y6C2 1016 aa23.88■■□□□ 1.41
RTN4R-202ENST00000416372 TMEM94Q12767 1356 aa23.88■■□□□ 1.41
RTN4R-202ENST00000416372 NGEFQ8N5V2 710 aa23.86■■□□□ 1.41
RTN4R-202ENST00000416372 CDK12Q9NYV4 1490 aaPredicted RBP23.86■■□□□ 1.41
RTN4R-202ENST00000416372 NCOA3Q9Y6Q9 1424 aa23.86■■□□□ 1.41
RTN4R-202ENST00000416372 RRS1Q15050 365 aaKnown RBP23.86■■□□□ 1.41
RTN4R-202ENST00000416372 USP31Q70CQ4 1352 aa23.85■■□□□ 1.41
RTN4R-202ENST00000416372 PIK3C2AO00443 1686 aa23.85■■□□□ 1.41
RTN4R-202ENST00000416372 FKBP8Q14318 412 aa23.84■■□□□ 1.41
RTN4R-202ENST00000416372 CDCA7LQ96GN5 454 aa23.84■■□□□ 1.41
RTN4R-202ENST00000416372 PAK3O75914 559 aaPredicted RBP23.83■■□□□ 1.41
RTN4R-202ENST00000416372 ATF3P18847 181 aa23.83■■□□□ 1.4
RTN4R-202ENST00000416372 PSME1Q06323 249 aa23.83■■□□□ 1.4
RTN4R-202ENST00000416372 ZNF521Q96K83 1311 aa23.83■■□□□ 1.4
RTN4R-202ENST00000416372 ORAI2Q96SN7 254 aa23.82■■□□□ 1.4
RTN4R-202ENST00000416372 NLRP6P59044 892 aa23.81■■□□□ 1.4
RTN4R-202ENST00000416372 TCP11L2Q8N4U5 519 aa23.81■■□□□ 1.4
RTN4R-202ENST00000416372 IQSEC2Q5JU85 1478 aa23.8■■□□□ 1.4
RTN4R-202ENST00000416372 C1orf167Q5SNV9 1468 aa23.8■■□□□ 1.4
RTN4R-202ENST00000416372 DCCP43146 1447 aa23.8■■□□□ 1.4
RTN4R-202ENST00000416372 GOLGA2Q08379 1002 aa23.8■■□□□ 1.4
RTN4R-202ENST00000416372 ABTB2Q8N961 1025 aa23.8■■□□□ 1.4
RTN4R-202ENST00000416372 SOX12O15370 315 aa23.79■■□□□ 1.4
RTN4R-202ENST00000416372 PNNQ9H307 717 aaKnown RBP23.78■■□□□ 1.4
RTN4R-202ENST00000416372 NUTM2GQ5VZR2 741 aa23.78■■□□□ 1.4
RTN4R-202ENST00000416372 KIF1AQ12756 1690 aa23.77■■□□□ 1.4
RTN4R-202ENST00000416372 USP54Q70EL1 1684 aa23.77■■□□□ 1.4
RTN4R-202ENST00000416372 IL13P35225 146 aa23.77■■□□□ 1.4
RTN4R-202ENST00000416372 FOXO3O43524 673 aa23.76■■□□□ 1.39
RTN4R-202ENST00000416372 NEUROD2Q15784 382 aa23.76■■□□□ 1.39
RTN4R-202ENST00000416372 RRP7AQ9Y3A4 280 aaKnown RBP23.76■■□□□ 1.39
RTN4R-202ENST00000416372 MSH6P52701 1360 aa23.76■■□□□ 1.39
RTN4R-202ENST00000416372 MAPK8IP3Q9UPT6 1336 aa23.76■■□□□ 1.39
RTN4R-202ENST00000416372 PLEKHF1Q96S99 279 aa23.75■■□□□ 1.39
RTN4R-202ENST00000416372 MST1RQ04912 1400 aa23.75■■□□□ 1.39
RTN4R-202ENST00000416372 MARF1Q9Y4F3 1742 aaKnown RBP23.75■■□□□ 1.39
RTN4R-202ENST00000416372 FCHSD2O94868 740 aa23.75■■□□□ 1.39
RTN4R-202ENST00000416372 CADPS2Q86UW7 1296 aa23.75■■□□□ 1.39
RTN4R-202ENST00000416372 PEAK1Q9H792 1746 aa23.74■■□□□ 1.39
RTN4R-202ENST00000416372 ZNF335Q9H4Z2 1342 aaPredicted RBP23.74■■□□□ 1.39
RTN4R-202ENST00000416372 WWC1Q8IX03 1113 aa23.73■■□□□ 1.39
RTN4R-202ENST00000416372 XIRP1Q702N8 1843 aaKnown RBP23.73■■□□□ 1.39
RTN4R-202ENST00000416372 MAP3K19Q56UN5 1328 aa23.73■■□□□ 1.39
RTN4R-202ENST00000416372 LRRC7Q96NW7 1537 aa23.73■■□□□ 1.39
RTN4R-202ENST00000416372 NCBP3Q53F19 620 aaKnown RBP23.73■■□□□ 1.39
RTN4R-202ENST00000416372 SLFN5Q08AF3 891 aa23.72■■□□□ 1.39
RTN4R-202ENST00000416372 XPCQ01831 940 aaPredicted RBP23.71■■□□□ 1.39
RTN4R-202ENST00000416372 RSPH6AQ9H0K4 717 aa23.71■■□□□ 1.39
RTN4R-202ENST00000416372 RCAN3Q9UKA8 241 aa23.71■■□□□ 1.39
RTN4R-202ENST00000416372 DMRT2Q9Y5R5 561 aa23.71■■□□□ 1.39
RTN4R-202ENST00000416372 SBNO1A3KN83 1393 aa23.71■■□□□ 1.39
RTN4R-202ENST00000416372 IRX6P78412 446 aaPredicted RBP23.7■■□□□ 1.39
RTN4R-202ENST00000416372 CCDC27Q2M243 656 aa23.7■■□□□ 1.39
RTN4R-202ENST00000416372 NEFMP07197 916 aa23.7■■□□□ 1.38
RTN4R-202ENST00000416372 HMOX1P09601 288 aa23.7■■□□□ 1.38
RTN4R-202ENST00000416372 EIF4A2Q14240 407 aaKnown RBP23.7■■□□□ 1.38
RTN4R-202ENST00000416372 DUSP27Q5VZP5 1158 aa23.7■■□□□ 1.38
RTN4R-202ENST00000416372 KRT28Q7Z3Y7 464 aa23.7■■□□□ 1.38
RTN4R-202ENST00000416372 E9PSI1 815 aa23.69■■□□□ 1.38
RTN4R-202ENST00000416372 PRKAR2BP31323 418 aa23.69■■□□□ 1.38
RTN4R-202ENST00000416372 AMPHP49418 695 aa23.69■■□□□ 1.38
RTN4R-202ENST00000416372 HSP90AB2PQ58FF8 381 aa23.69■■□□□ 1.38
RTN4R-202ENST00000416372 PHF23Q9BUL5 403 aaPredicted RBP23.69■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms