RNA–Protein interactions for RNA: ENST00000416229.1

AC007040.1-201, humanhuman

TSL 3 BASIC

Gene AC007040.1, Length 477 nt, Biotype antisense RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC007040.1-201ENST00000416229 ARHGEF28Q8N1W1 1705 aaKnown RBP28.99■■■□□ 2.23
AC007040.1-201ENST00000416229 CRYBG1Q9Y4K1 1723 aa28.99■■■□□ 2.23
AC007040.1-201ENST00000416229 BTG4Q9NY30 223 aa28.98■■■□□ 2.23
AC007040.1-201ENST00000416229 DEFB132Q7Z7B7 95 aa28.96■■■□□ 2.23
AC007040.1-201ENST00000416229 NGDNQ8NEJ9 315 aaKnown RBP28.96■■■□□ 2.23
AC007040.1-201ENST00000416229 ATP7BP35670 1465 aa28.94■■■□□ 2.22
AC007040.1-201ENST00000416229 FAM98CQ17RN3 349 aaKnown RBP28.91■■■□□ 2.22
AC007040.1-201ENST00000416229 SPATA31A5Q5VU36 1347 aa28.91■■■□□ 2.22
AC007040.1-201ENST00000416229 SPATA31A7Q8IWB4 1347 aa28.91■■■□□ 2.22
AC007040.1-201ENST00000416229 KIAA1210Q9ULL0 1709 aa28.89■■■□□ 2.22
AC007040.1-201ENST00000416229 A0A0G2JS52 829 aa28.89■■■□□ 2.22
AC007040.1-201ENST00000416229 MYT1Q01538 1121 aa28.89■■■□□ 2.22
AC007040.1-201ENST00000416229 NUDT16Q96DE0 195 aaKnown RBP28.89■■■□□ 2.22
AC007040.1-201ENST00000416229 PAK3O75914 559 aaPredicted RBP28.88■■■□□ 2.21
AC007040.1-201ENST00000416229 BAG6P46379 1132 aa28.88■■■□□ 2.21
AC007040.1-201ENST00000416229 THSD7AQ9UPZ6 1657 aa28.87■■■□□ 2.21
AC007040.1-201ENST00000416229 PRDM11Q9NQV5 511 aa28.87■■■□□ 2.21
AC007040.1-201ENST00000416229 POLR3AO14802 1390 aaPredicted RBP28.86■■■□□ 2.21
AC007040.1-201ENST00000416229 TOPAZ1Q8N9V7 1692 aa28.85■■■□□ 2.21
AC007040.1-201ENST00000416229 RGPD1P0DJD0 1748 aa28.85■■■□□ 2.21
AC007040.1-201ENST00000416229 LRP5O75197 1615 aa28.84■■■□□ 2.21
AC007040.1-201ENST00000416229 PHRF1Q9P1Y6 1649 aaKnown RBP28.84■■■□□ 2.21
AC007040.1-201ENST00000416229 CDK19Q9BWU1 502 aa28.83■■■□□ 2.21
AC007040.1-201ENST00000416229 KIAA0232Q92628 1395 aa28.81■■■□□ 2.2
AC007040.1-201ENST00000416229 CCDC61Q9Y6R9 512 aa28.81■■■□□ 2.2
AC007040.1-201ENST00000416229 DISP2A7MBM2 1401 aa28.8■■■□□ 2.2
AC007040.1-201ENST00000416229 PLEKHG3A1L390 1219 aa28.8■■■□□ 2.2
AC007040.1-201ENST00000416229 SPATA31A1Q5TZJ5 1347 aa28.79■■■□□ 2.2
AC007040.1-201ENST00000416229 ACEP12821 1306 aa28.77■■■□□ 2.2
AC007040.1-201ENST00000416229 NBPF8Q3BBV2 869 aa28.77■■■□□ 2.2
AC007040.1-201ENST00000416229 TNS1Q9HBL0 1735 aaKnown RBP28.74■■■□□ 2.19
AC007040.1-201ENST00000416229 NRKQ7Z2Y5 1582 aa28.72■■■□□ 2.19
AC007040.1-201ENST00000416229 CHRNA2Q15822 529 aa28.72■■■□□ 2.19
AC007040.1-201ENST00000416229 CPDO75976 1380 aa28.72■■■□□ 2.19
AC007040.1-201ENST00000416229 ZC3H6P61129 1189 aaKnown RBP28.71■■■□□ 2.19
AC007040.1-201ENST00000416229 EN1Q05925 392 aaPredicted RBP28.71■■■□□ 2.19
AC007040.1-201ENST00000416229 FAM196AQ6ZSG2 479 aa28.71■■■□□ 2.19
AC007040.1-201ENST00000416229 FAM182BQ5T319 152 aa28.7■■■□□ 2.18
AC007040.1-201ENST00000416229 BARGINQ6ZT62 677 aa28.7■■■□□ 2.18
AC007040.1-201ENST00000416229 BRD4O60885 1362 aaPredicted RBP28.7■■■□□ 2.18
AC007040.1-201ENST00000416229 USP19O94966 1318 aa28.69■■■□□ 2.18
AC007040.1-201ENST00000416229 SSH2Q76I76 1423 aa28.69■■■□□ 2.18
AC007040.1-201ENST00000416229 STRN4Q9NRL3 753 aa28.69■■■□□ 2.18
AC007040.1-201ENST00000416229 LMO7Q8WWI1 1683 aa28.68■■■□□ 2.18
AC007040.1-201ENST00000416229 NBPF1Q3BBV0 1214 aa28.68■■■□□ 2.18
AC007040.1-201ENST00000416229 NUTM2GQ5VZR2 741 aa28.68■■■□□ 2.18
AC007040.1-201ENST00000416229 ABTB2Q8N961 1025 aa28.68■■■□□ 2.18
AC007040.1-201ENST00000416229 PARD3Q8TEW0 1356 aa28.66■■■□□ 2.18
AC007040.1-201ENST00000416229 PSDA5PKW4 1024 aaPredicted RBP28.66■■■□□ 2.18
AC007040.1-201ENST00000416229 CAMTA1Q9Y6Y1 1673 aa28.66■■■□□ 2.18
AC007040.1-201ENST00000416229 CENPJQ9HC77 1338 aaPredicted RBP28.66■■■□□ 2.18
AC007040.1-201ENST00000416229 EVA1CP58658 441 aa28.65■■■□□ 2.18
AC007040.1-201ENST00000416229 PPIP5K1Q6PFW1 1433 aa28.65■■■□□ 2.18
AC007040.1-201ENST00000416229 NLRP13Q86W25 1043 aa28.64■■■□□ 2.18
AC007040.1-201ENST00000416229 SRPK2P78362 688 aaKnown RBP28.63■■■□□ 2.17
AC007040.1-201ENST00000416229 CAMKK2Q96RR4 588 aa28.62■■■□□ 2.17
AC007040.1-201ENST00000416229 THRAP3Q9Y2W1 955 aaKnown RBP28.62■■■□□ 2.17
AC007040.1-201ENST00000416229 QRICH2Q9H0J4 1663 aa28.61■■■□□ 2.17
AC007040.1-201ENST00000416229 TRIM37O94972 964 aa28.6■■■□□ 2.17
AC007040.1-201ENST00000416229 GCP02774 474 aa28.6■■■□□ 2.17
AC007040.1-201ENST00000416229 EZH2Q15910 746 aaKnown RBP28.6■■■□□ 2.17
AC007040.1-201ENST00000416229 TCP11L2Q8N4U5 519 aa28.6■■■□□ 2.17
AC007040.1-201ENST00000416229 USP35Q9P2H5 1018 aa28.6■■■□□ 2.17
AC007040.1-201ENST00000416229 PDE3BQ13370 1112 aa28.59■■■□□ 2.17
AC007040.1-201ENST00000416229 LARP1Q6PKG0 1096 aaKnown RBP28.59■■■□□ 2.17
AC007040.1-201ENST00000416229 R3HDM1Q15032 1099 aaKnown RBP28.57■■■□□ 2.16
AC007040.1-201ENST00000416229 CABP2Q9NPB3 220 aa28.57■■■□□ 2.16
AC007040.1-201ENST00000416229 COL5A2P05997 1499 aaPredicted RBP28.57■■■□□ 2.16
AC007040.1-201ENST00000416229 USP6P35125 1406 aa28.56■■■□□ 2.16
AC007040.1-201ENST00000416229 PARP4Q9UKK3 1724 aaKnown RBP28.56■■■□□ 2.16
AC007040.1-201ENST00000416229 C11orf95C9JLR9 678 aaPredicted RBP28.55■■■□□ 2.16
AC007040.1-201ENST00000416229 APBA3O96018 575 aa28.55■■■□□ 2.16
AC007040.1-201ENST00000416229 RREB1Q92766 1687 aa28.54■■■□□ 2.16
AC007040.1-201ENST00000416229 SLIT3O75094 1523 aa28.53■■■□□ 2.16
AC007040.1-201ENST00000416229 CRB1P82279 1406 aa28.52■■■□□ 2.16
AC007040.1-201ENST00000416229 AATKQ6ZMQ8 1374 aa28.51■■■□□ 2.16
AC007040.1-201ENST00000416229 CABP1Q9NZU7 370 aa28.51■■■□□ 2.15
AC007040.1-201ENST00000416229 EVC2Q86UK5 1308 aa28.48■■■□□ 2.15
AC007040.1-201ENST00000416229 NLRP6P59044 892 aa28.48■■■□□ 2.15
AC007040.1-201ENST00000416229 L3MBTL2Q969R5 705 aa28.48■■■□□ 2.15
AC007040.1-201ENST00000416229 NUP188Q5SRE5 1749 aa28.48■■■□□ 2.15
AC007040.1-201ENST00000416229 TRPM1Q7Z4N2 1603 aa28.47■■■□□ 2.15
AC007040.1-201ENST00000416229 PIK3C2AO00443 1686 aa28.46■■■□□ 2.15
AC007040.1-201ENST00000416229 COL18A1P39060 1754 aa28.45■■■□□ 2.14
AC007040.1-201ENST00000416229 ZNF692Q9BU19 519 aaPredicted RBP28.44■■■□□ 2.14
AC007040.1-201ENST00000416229 OVOS2A0A0G2JMS6 1433 aa28.43■■■□□ 2.14
AC007040.1-201ENST00000416229 OVOS2A0A0J9YW53 1432 aa28.43■■■□□ 2.14
AC007040.1-201ENST00000416229 OVOS2Q6IE36 1432 aa28.43■■■□□ 2.14
AC007040.1-201ENST00000416229 PEAK1Q9H792 1746 aa28.43■■■□□ 2.14
AC007040.1-201ENST00000416229 NBPF14Q5TI25 921 aa28.43■■■□□ 2.14
AC007040.1-201ENST00000416229 RGPD3A6NKT7 1758 aaPredicted RBP28.42■■■□□ 2.14
AC007040.1-201ENST00000416229 RGPD4Q7Z3J3 1758 aa28.42■■■□□ 2.14
AC007040.1-201ENST00000416229 LRRC37A3O60309 1634 aa28.4■■■□□ 2.14
AC007040.1-201ENST00000416229 AKAP12Q02952 1782 aa28.4■■■□□ 2.14
AC007040.1-201ENST00000416229 KCNH5Q8NCM2 988 aa28.39■■■□□ 2.14
AC007040.1-201ENST00000416229 CPSF1Q10570 1443 aaKnown RBP28.38■■■□□ 2.13
AC007040.1-201ENST00000416229 CDCA7Q9BWT1 371 aaPredicted RBP28.38■■■□□ 2.13
AC007040.1-201ENST00000416229 WNK3Q9BYP7 1800 aa28.38■■■□□ 2.13
AC007040.1-201ENST00000416229 WDR17Q8IZU2 1322 aa28.38■■■□□ 2.13
AC007040.1-201ENST00000416229 TTC21AQ8NDW8 1320 aa28.38■■■□□ 2.13
Retrieved 100 of 20,778 RNA–protein pairs in 104 ms