RNA–Protein interactions for RNA: ENST00000416188.2

PHRF1-203, Transcript of PHD and ring finger domains 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PHRF1, Length 5,227 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHRF1-203ENST00000416188 SF3A1Q15459 793 aaKnown RBP19.1■□□□□ 0.65
PHRF1-203ENST00000416188 GPATCH8Q9UKJ3 1502 aaKnown RBP19.1■□□□□ 0.65
PHRF1-203ENST00000416188 ABCC2Q92887 1545 aa19.1■□□□□ 0.65
PHRF1-203ENST00000416188 IFIT2P09913 472 aaKnown RBP19.1■□□□□ 0.65
PHRF1-203ENST00000416188 CREBRFQ8IUR6 639 aa19.1■□□□□ 0.65
PHRF1-203ENST00000416188 KIF3AQ9Y496 699 aa19.09■□□□□ 0.65
PHRF1-203ENST00000416188 NCKAP5LQ9HCH0 1330 aa19.09■□□□□ 0.65
PHRF1-203ENST00000416188 CCDC30Q5VVM6 783 aa19.09■□□□□ 0.65
PHRF1-203ENST00000416188 PPP2R1AP30153 589 aa19.09■□□□□ 0.65
PHRF1-203ENST00000416188 TCP11L2Q8N4U5 519 aa19.08■□□□□ 0.65
PHRF1-203ENST00000416188 VPS53Q5VIR6 699 aa19.08■□□□□ 0.64
PHRF1-203ENST00000416188 DDX19BQ9UMR2 479 aa19.08■□□□□ 0.64
PHRF1-203ENST00000416188 PNISRQ8TF01 805 aaKnown RBP19.07■□□□□ 0.64
PHRF1-203ENST00000416188 CNTLNQ9NXG0 1405 aa19.07■□□□□ 0.64
PHRF1-203ENST00000416188 NUP153P49790 1475 aaKnown RBP19.07■□□□□ 0.64
PHRF1-203ENST00000416188 DZIP1LQ8IYY4 767 aaKnown RBP19.07■□□□□ 0.64
PHRF1-203ENST00000416188 DDX49Q9Y6V7 483 aaKnown RBP19.07■□□□□ 0.64
PHRF1-203ENST00000416188 NOS1P29475 1434 aa19.06■□□□□ 0.64
PHRF1-203ENST00000416188 APPP05067 770 aa19.06■□□□□ 0.64
PHRF1-203ENST00000416188 DDX11L8A8MPP1 907 aa19.06■□□□□ 0.64
PHRF1-203ENST00000416188 NEUROD6Q96NK8 337 aa19.06■□□□□ 0.64
PHRF1-203ENST00000416188 FANCIQ9NVI1 1328 aa19.05■□□□□ 0.64
PHRF1-203ENST00000416188 CWC22Q9HCG8 908 aaKnown RBP19.05■□□□□ 0.64
PHRF1-203ENST00000416188 DIAPH3Q9NSV4 1193 aa19.05■□□□□ 0.64
PHRF1-203ENST00000416188 H3BQV1 296 aa19.05■□□□□ 0.64
PHRF1-203ENST00000416188 IFFO2Q5TF58 517 aa19.05■□□□□ 0.64
PHRF1-203ENST00000416188 NUP160Q12769 1436 aa19.05■□□□□ 0.64
PHRF1-203ENST00000416188 PHF14O94880 888 aa19.05■□□□□ 0.64
PHRF1-203ENST00000416188 ADAMTS8Q9UP79 889 aa19.05■□□□□ 0.64
PHRF1-203ENST00000416188 EXOC5O00471 708 aa19.04■□□□□ 0.64
PHRF1-203ENST00000416188 LMTK3Q96Q04 1460 aa19.04■□□□□ 0.64
PHRF1-203ENST00000416188 HDGFL1Q5TGJ6 251 aa19.04■□□□□ 0.64
PHRF1-203ENST00000416188 FAM184AQ8NB25 1140 aa19.04■□□□□ 0.64
PHRF1-203ENST00000416188 ABCC10Q5T3U5 1492 aa19.03■□□□□ 0.64
PHRF1-203ENST00000416188 UBTFL1P0CB47 393 aaPredicted RBP19.03■□□□□ 0.64
PHRF1-203ENST00000416188 TMOD3Q9NYL9 352 aa19.03■□□□□ 0.64
PHRF1-203ENST00000416188 TRAPPC8Q9Y2L5 1435 aa19.03■□□□□ 0.64
PHRF1-203ENST00000416188 MARCH6O60337 910 aa19.02■□□□□ 0.64
PHRF1-203ENST00000416188 BICDL1Q6ZP65 573 aa19.02■□□□□ 0.64
PHRF1-203ENST00000416188 NME9Q86XW9 330 aa19.02■□□□□ 0.64
PHRF1-203ENST00000416188 UGGT2Q9NYU1 1516 aa19.02■□□□□ 0.64
PHRF1-203ENST00000416188 C8orf37Q96NL8 207 aa19.02■□□□□ 0.63
PHRF1-203ENST00000416188 HSP90AB4PQ58FF6 505 aa19.01■□□□□ 0.63
PHRF1-203ENST00000416188 KIAA0556O60303 1618 aa19.01■□□□□ 0.63
PHRF1-203ENST00000416188 NPHP3Q7Z494 1330 aa19.01■□□□□ 0.63
PHRF1-203ENST00000416188 ZMYM3Q14202 1370 aa19.01■□□□□ 0.63
PHRF1-203ENST00000416188 NOC3LQ8WTT2 800 aaKnown RBP19.01■□□□□ 0.63
PHRF1-203ENST00000416188 MYL6BP14649 208 aa19■□□□□ 0.63
PHRF1-203ENST00000416188 SYCP2Q9BX26 1530 aa19■□□□□ 0.63
PHRF1-203ENST00000416188 PTCD1O75127 700 aaKnown RBP19■□□□□ 0.63
PHRF1-203ENST00000416188 REC8O95072 547 aa19■□□□□ 0.63
PHRF1-203ENST00000416188 CCDC27Q2M243 656 aa19■□□□□ 0.63
PHRF1-203ENST00000416188 BTBD11A6QL63 1104 aa18.99■□□□□ 0.63
PHRF1-203ENST00000416188 STARD3NLO95772 234 aa18.99■□□□□ 0.63
PHRF1-203ENST00000416188 CHRNA2Q15822 529 aa18.99■□□□□ 0.63
PHRF1-203ENST00000416188 ATP6V1DQ9Y5K8 247 aa18.99■□□□□ 0.63
PHRF1-203ENST00000416188 C14orf93Q9H972 538 aaKnown RBP18.99■□□□□ 0.63
PHRF1-203ENST00000416188 USHBP1Q8N6Y0 703 aa18.98■□□□□ 0.63
PHRF1-203ENST00000416188 MPRIPQ6WCQ1 1025 aa18.98■□□□□ 0.63
PHRF1-203ENST00000416188 NSD3Q9BZ95 1437 aa18.98■□□□□ 0.63
PHRF1-203ENST00000416188 UHRF1BP1Q6BDS2 1440 aa18.98■□□□□ 0.63
PHRF1-203ENST00000416188 MCTP1Q6DN14 999 aa18.97■□□□□ 0.63
PHRF1-203ENST00000416188 SAMD1Q6SPF0 538 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-203ENST00000416188 RUFY2Q8WXA3 655 aa18.97■□□□□ 0.63
PHRF1-203ENST00000416188 TWISTNBQ3B726 338 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-203ENST00000416188 MAP3K1Q13233 1512 aa18.97■□□□□ 0.63
PHRF1-203ENST00000416188 ZKSCAN1P17029 563 aaPredicted RBP18.97■□□□□ 0.63
PHRF1-203ENST00000416188 SYNE3Q6ZMZ3 975 aa18.97■□□□□ 0.63
PHRF1-203ENST00000416188 C19orf44Q9H6X5 657 aa18.97■□□□□ 0.63
PHRF1-203ENST00000416188 DHX16O60231 1041 aaKnown RBP18.97■□□□□ 0.63
PHRF1-203ENST00000416188 LNPKQ9C0E8 428 aa18.97■□□□□ 0.63
PHRF1-203ENST00000416188 RIMS2Q9UQ26 1411 aa18.96■□□□□ 0.63
PHRF1-203ENST00000416188 AKAP17AQ02040 695 aaKnown RBP18.96■□□□□ 0.63
PHRF1-203ENST00000416188 PDE4CQ08493 712 aa18.96■□□□□ 0.63
PHRF1-203ENST00000416188 ANO2Q9NQ90 1003 aa18.96■□□□□ 0.63
PHRF1-203ENST00000416188 CNNM1Q9NRU3 951 aa18.96■□□□□ 0.63
PHRF1-203ENST00000416188 BCL11BQ9C0K0 894 aaPredicted RBP18.96■□□□□ 0.63
PHRF1-203ENST00000416188 PES1O00541 588 aaKnown RBP18.95■□□□□ 0.62
PHRF1-203ENST00000416188 GSE1Q14687 1217 aa18.95■□□□□ 0.62
PHRF1-203ENST00000416188 ZPR1O75312 459 aa18.95■□□□□ 0.62
PHRF1-203ENST00000416188 FYB1O15117 783 aa18.95■□□□□ 0.62
PHRF1-203ENST00000416188 BRD4O60885 1362 aaPredicted RBP18.95■□□□□ 0.62
PHRF1-203ENST00000416188 PANK1Q8TE04 598 aa18.95■□□□□ 0.62
PHRF1-203ENST00000416188 ZNF428Q96B54 188 aa18.94■□□□□ 0.62
PHRF1-203ENST00000416188 SKOR2Q2VWA4 1001 aaPredicted RBP18.94■□□□□ 0.62
PHRF1-203ENST00000416188 ACEP12821 1306 aa18.94■□□□□ 0.62
PHRF1-203ENST00000416188 GNAT3A8MTJ3 354 aa18.93■□□□□ 0.62
PHRF1-203ENST00000416188 BECN2A8MW95 431 aa18.93■□□□□ 0.62
PHRF1-203ENST00000416188 CEP170Q5SW79 1584 aa18.93■□□□□ 0.62
PHRF1-203ENST00000416188 DUOX2Q9NRD8 1548 aa18.93■□□□□ 0.62
PHRF1-203ENST00000416188 SLC4A2P04920 1241 aa18.93■□□□□ 0.62
PHRF1-203ENST00000416188 GNAI3P08754 354 aa18.93■□□□□ 0.62
PHRF1-203ENST00000416188 CPLX2Q6PUV4 134 aaKnown RBP18.93■□□□□ 0.62
PHRF1-203ENST00000416188 CHMP4CQ96CF2 233 aa18.93■□□□□ 0.62
PHRF1-203ENST00000416188 GOLGA6L19H0YKK7 550 aa18.92■□□□□ 0.62
PHRF1-203ENST00000416188 AMOTQ4VCS5 1084 aa18.92■□□□□ 0.62
PHRF1-203ENST00000416188 TPM3P06753 285 aa18.92■□□□□ 0.62
PHRF1-203ENST00000416188 EXOSC9Q06265 439 aaKnown RBP18.92■□□□□ 0.62
PHRF1-203ENST00000416188 WASHC4Q2M389 1173 aa18.92■□□□□ 0.62
PHRF1-203ENST00000416188 TRDNQ13061 729 aa18.91■□□□□ 0.62
Retrieved 100 of 20,778 RNA–protein pairs in 45.3 ms