RNA–Protein interactions for RNA: ENST00000416004.1

CHRNA1-206, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 2

Gene CHRNA1, Length 1,879 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-206ENST00000416004 USP21Q9UK80 565 aa12.8□□□□□ -0.36
CHRNA1-206ENST00000416004 QTRT2Q9H974 415 aaKnown RBP12.79□□□□□ -0.36
CHRNA1-206ENST00000416004 EVC2Q86UK5 1308 aa12.79□□□□□ -0.36
CHRNA1-206ENST00000416004 TRPC5Q9UL62 973 aaPredicted RBP12.78□□□□□ -0.36
CHRNA1-206ENST00000416004 CCDC61Q9Y6R9 512 aa12.78□□□□□ -0.36
CHRNA1-206ENST00000416004 PLEKHG5O94827 1062 aa12.78□□□□□ -0.36
CHRNA1-206ENST00000416004 RBM6P78332 1123 aaKnown RBP12.78□□□□□ -0.36
CHRNA1-206ENST00000416004 MIER1Q8N108 512 aa12.78□□□□□ -0.36
CHRNA1-206ENST00000416004 ATP7BP35670 1465 aa12.77□□□□□ -0.36
CHRNA1-206ENST00000416004 PRR36Q9H6K5 1346 aa12.77□□□□□ -0.37
CHRNA1-206ENST00000416004 TOPAZ1Q8N9V7 1692 aa12.76□□□□□ -0.37
CHRNA1-206ENST00000416004 TRPM3Q9HCF6 1732 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-206ENST00000416004 CDK12Q9NYV4 1490 aaPredicted RBP12.76□□□□□ -0.37
CHRNA1-206ENST00000416004 POLR3GLQ9BT43 218 aa12.75□□□□□ -0.37
CHRNA1-206ENST00000416004 SLC24A1O60721 1099 aa12.74□□□□□ -0.37
CHRNA1-206ENST00000416004 FNBP4Q8N3X1 1017 aaPredicted RBP12.74□□□□□ -0.37
CHRNA1-206ENST00000416004 PPIP5K1Q6PFW1 1433 aa12.74□□□□□ -0.37
CHRNA1-206ENST00000416004 ALS2Q96Q42 1657 aa12.74□□□□□ -0.37
CHRNA1-206ENST00000416004 ACEP12821 1306 aa12.73□□□□□ -0.37
CHRNA1-206ENST00000416004 ABCA3Q99758 1704 aa12.73□□□□□ -0.37
CHRNA1-206ENST00000416004 TNKS1BP1Q9C0C2 1729 aaKnown RBP12.73□□□□□ -0.37
CHRNA1-206ENST00000416004 PLEKHG3A1L390 1219 aa12.73□□□□□ -0.37
CHRNA1-206ENST00000416004 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
CHRNA1-206ENST00000416004 CABLES1Q8TDN4 633 aa12.72□□□□□ -0.37
CHRNA1-206ENST00000416004 NWD2Q9ULI1 1742 aa12.72□□□□□ -0.37
CHRNA1-206ENST00000416004 POLR3AO14802 1390 aaPredicted RBP12.72□□□□□ -0.37
CHRNA1-206ENST00000416004 BRD4O60885 1362 aaPredicted RBP12.72□□□□□ -0.37
CHRNA1-206ENST00000416004 UNC5CLQ8IV45 518 aa12.72□□□□□ -0.37
CHRNA1-206ENST00000416004 CCDC9Q9Y3X0 531 aaKnown RBP12.72□□□□□ -0.37
CHRNA1-206ENST00000416004 ATAD2Q6PL18 1390 aa12.71□□□□□ -0.37
CHRNA1-206ENST00000416004 TMF1P82094 1093 aa12.71□□□□□ -0.37
CHRNA1-206ENST00000416004 PLCH1Q4KWH8 1693 aa12.71□□□□□ -0.38
CHRNA1-206ENST00000416004 ABTB2Q8N961 1025 aa12.7□□□□□ -0.38
CHRNA1-206ENST00000416004 ZNF692Q9BU19 519 aaPredicted RBP12.7□□□□□ -0.38
CHRNA1-206ENST00000416004 COL14A1Q05707 1796 aaKnown RBP12.69□□□□□ -0.38
CHRNA1-206ENST00000416004 ATRNO75882 1429 aa12.69□□□□□ -0.38
CHRNA1-206ENST00000416004 NLRP13Q86W25 1043 aa12.69□□□□□ -0.38
CHRNA1-206ENST00000416004 CABP1Q9NZU7 370 aa12.69□□□□□ -0.38
CHRNA1-206ENST00000416004 SBNO2Q9Y2G9 1366 aa12.69□□□□□ -0.38
CHRNA1-206ENST00000416004 GJD4Q96KN9 370 aaPredicted RBP12.68□□□□□ -0.38
CHRNA1-206ENST00000416004 PRDM11Q9NQV5 511 aa12.68□□□□□ -0.38
CHRNA1-206ENST00000416004 BCL9LQ86UU0 1499 aa12.68□□□□□ -0.38
CHRNA1-206ENST00000416004 SLIT2O94813 1529 aa12.68□□□□□ -0.38
CHRNA1-206ENST00000416004 RGS12O14924 1447 aa12.67□□□□□ -0.38
CHRNA1-206ENST00000416004 PHRF1Q9P1Y6 1649 aaKnown RBP12.67□□□□□ -0.38
CHRNA1-206ENST00000416004 NUTM2GQ5VZR2 741 aa12.66□□□□□ -0.38
CHRNA1-206ENST00000416004 A0A0G2JS52 829 aa12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 CENPBP07199 599 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 BTG4Q9NY30 223 aa12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 CRYBG1Q9Y4K1 1723 aa12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 USP6P35125 1406 aa12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 FAM83GA6ND36 823 aa12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 VPS72Q15906 364 aa12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 HDGFL2Q7Z4V5 671 aaPredicted RBP12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 TMC1Q8TDI8 760 aa12.65□□□□□ -0.38
CHRNA1-206ENST00000416004 AKAP12Q02952 1782 aa12.65□□□□□ -0.39
CHRNA1-206ENST00000416004 NLRP6P59044 892 aa12.64□□□□□ -0.39
CHRNA1-206ENST00000416004 EVA1CP58658 441 aa12.63□□□□□ -0.39
CHRNA1-206ENST00000416004 KTN1Q86UP2 1357 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-206ENST00000416004 TTC21AQ8NDW8 1320 aa12.63□□□□□ -0.39
CHRNA1-206ENST00000416004 ANP32CO43423 234 aa12.63□□□□□ -0.39
CHRNA1-206ENST00000416004 ZC3H6P61129 1189 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-206ENST00000416004 PUS7Q96PZ0 661 aaKnown RBP12.63□□□□□ -0.39
CHRNA1-206ENST00000416004 TERF2IPQ9NYB0 399 aa12.63□□□□□ -0.39
CHRNA1-206ENST00000416004 CDCA8Q53HL2 280 aa12.62□□□□□ -0.39
CHRNA1-206ENST00000416004 KIAA0232Q92628 1395 aa12.62□□□□□ -0.39
CHRNA1-206ENST00000416004 NRAPQ86VF7 1730 aa12.62□□□□□ -0.39
CHRNA1-206ENST00000416004 KCNH5Q8NCM2 988 aa12.61□□□□□ -0.39
CHRNA1-206ENST00000416004 UPF1Q92900 1129 aaKnown RBP eCLIP12.61□□□□□ -0.39
CHRNA1-206ENST00000416004 PANK3Q9H999 370 aa12.61□□□□□ -0.39
CHRNA1-206ENST00000416004 NINLQ9Y2I6 1382 aa12.61□□□□□ -0.39
CHRNA1-206ENST00000416004 ZBTB7CA1YPR0 619 aa12.61□□□□□ -0.39
CHRNA1-206ENST00000416004 MYOM1P52179 1685 aa12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 PER1O15534 1290 aaPredicted RBP12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 GCP02774 474 aa12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 GLI3P10071 1580 aa12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 NRKQ7Z2Y5 1582 aa12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 STRN4Q9NRL3 753 aa12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 USP19O94966 1318 aa12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 MON2Q7Z3U7 1717 aa12.6□□□□□ -0.39
CHRNA1-206ENST00000416004 CCDC125Q86Z20 511 aa12.59□□□□□ -0.39
CHRNA1-206ENST00000416004 TTC21BQ7Z4L5 1316 aa12.59□□□□□ -0.39
CHRNA1-206ENST00000416004 SF3B2Q13435 895 aaKnown RBP12.59□□□□□ -0.39
CHRNA1-206ENST00000416004 CNGB1Q14028 1251 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-206ENST00000416004 CHRNA2Q15822 529 aa12.59□□□□□ -0.39
CHRNA1-206ENST00000416004 PRKRIP1Q9H875 184 aaPredicted RBP12.59□□□□□ -0.39
CHRNA1-206ENST00000416004 CPDO75976 1380 aa12.59□□□□□ -0.39
CHRNA1-206ENST00000416004 SEPT12Q8IYM1 358 aa12.58□□□□□ -0.4
CHRNA1-206ENST00000416004 PIK3C2AO00443 1686 aa12.58□□□□□ -0.4
CHRNA1-206ENST00000416004 BRWD3Q6RI45 1802 aa12.57□□□□□ -0.4
CHRNA1-206ENST00000416004 CPSF1Q10570 1443 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-206ENST00000416004 FAM98CQ17RN3 349 aaKnown RBP12.57□□□□□ -0.4
CHRNA1-206ENST00000416004 KRT27Q7Z3Y8 459 aa12.57□□□□□ -0.4
CHRNA1-206ENST00000416004 SUGP2Q8IX01 1082 aaKnown RBP eCLIP12.57□□□□□ -0.4
CHRNA1-206ENST00000416004 SPATA31A5Q5VU36 1347 aa12.56□□□□□ -0.4
CHRNA1-206ENST00000416004 SPATA31A7Q8IWB4 1347 aa12.56□□□□□ -0.4
CHRNA1-206ENST00000416004 SLC12A5Q9H2X9 1139 aa12.56□□□□□ -0.4
CHRNA1-206ENST00000416004 SLIT3O75094 1523 aa12.56□□□□□ -0.4
CHRNA1-206ENST00000416004 EDC4Q6P2E9 1401 aaKnown RBP12.55□□□□□ -0.4
CHRNA1-206ENST00000416004 SSH2Q76I76 1423 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms