RNA–Protein interactions for RNA: ENST00000415948.5

CRAT-203, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 5

Gene CRAT, Length 800 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-203ENST00000415948 TMC1Q8TDI8 760 aa21.57■■□□□ 1.04
CRAT-203ENST00000415948 WASHC2AQ641Q2 1341 aa21.56■■□□□ 1.04
CRAT-203ENST00000415948 CCDC7Q96M83 1385 aa21.56■■□□□ 1.04
CRAT-203ENST00000415948 JCADQ9P266 1359 aa21.56■■□□□ 1.04
CRAT-203ENST00000415948 PSME1Q06323 249 aa21.55■■□□□ 1.04
CRAT-203ENST00000415948 POLR3GLQ9BT43 218 aa21.55■■□□□ 1.04
CRAT-203ENST00000415948 USP54Q70EL1 1684 aa21.55■■□□□ 1.04
CRAT-203ENST00000415948 ANKRD36BQ8N2N9 1353 aa21.54■■□□□ 1.04
CRAT-203ENST00000415948 KTN1Q86UP2 1357 aaKnown RBP21.53■■□□□ 1.04
CRAT-203ENST00000415948 NINLQ9Y2I6 1382 aa21.53■■□□□ 1.04
CRAT-203ENST00000415948 KIF20BQ96Q89 1820 aa21.52■■□□□ 1.04
CRAT-203ENST00000415948 LRRC59Q96AG4 307 aaKnown RBP21.51■■□□□ 1.03
CRAT-203ENST00000415948 CARD14Q9BXL6 1004 aa21.51■■□□□ 1.03
CRAT-203ENST00000415948 TTC21BQ7Z4L5 1316 aa21.51■■□□□ 1.03
CRAT-203ENST00000415948 NUTM2GQ5VZR2 741 aa21.5■■□□□ 1.03
CRAT-203ENST00000415948 ZRANB1Q9UGI0 708 aa21.5■■□□□ 1.03
CRAT-203ENST00000415948 EDC4Q6P2E9 1401 aaKnown RBP21.49■■□□□ 1.03
CRAT-203ENST00000415948 SLC24A1O60721 1099 aa21.49■■□□□ 1.03
CRAT-203ENST00000415948 CABLES1Q8TDN4 633 aa21.49■■□□□ 1.03
CRAT-203ENST00000415948 PAK3O75914 559 aaPredicted RBP21.48■■□□□ 1.03
CRAT-203ENST00000415948 PLEKHG5O94827 1062 aa21.48■■□□□ 1.03
CRAT-203ENST00000415948 CDCA8Q53HL2 280 aa21.48■■□□□ 1.03
CRAT-203ENST00000415948 SLIT3O75094 1523 aa21.47■■□□□ 1.03
CRAT-203ENST00000415948 NSD3Q9BZ95 1437 aa21.46■■□□□ 1.03
CRAT-203ENST00000415948 NME9Q86XW9 330 aa21.46■■□□□ 1.03
CRAT-203ENST00000415948 LMOD2Q6P5Q4 547 aa21.45■■□□□ 1.02
CRAT-203ENST00000415948 SUGP2Q8IX01 1082 aaKnown RBP eCLIP21.45■■□□□ 1.02
CRAT-203ENST00000415948 ARHGEF10O15013 1369 aa21.45■■□□□ 1.02
CRAT-203ENST00000415948 HDGFL2Q7Z4V5 671 aaPredicted RBP21.44■■□□□ 1.02
CRAT-203ENST00000415948 ZNF692Q9BU19 519 aaPredicted RBP21.44■■□□□ 1.02
CRAT-203ENST00000415948 USP19O94966 1318 aa21.44■■□□□ 1.02
CRAT-203ENST00000415948 OVOS2A0A0J9YW53 1432 aa21.44■■□□□ 1.02
CRAT-203ENST00000415948 OVOS2Q6IE36 1432 aa21.44■■□□□ 1.02
CRAT-203ENST00000415948 ANKRD26Q9UPS8 1709 aa21.43■■□□□ 1.02
CRAT-203ENST00000415948 NUTM2BA6NNL0 878 aaPredicted RBP21.43■■□□□ 1.02
CRAT-203ENST00000415948 NUTM2EB1AL46 878 aaPredicted RBP21.43■■□□□ 1.02
CRAT-203ENST00000415948 NUTM2AQ8IVF1 878 aaPredicted RBP21.43■■□□□ 1.02
CRAT-203ENST00000415948 TERF2IPQ9NYB0 399 aa21.43■■□□□ 1.02
CRAT-203ENST00000415948 BRD4O60885 1362 aaPredicted RBP21.43■■□□□ 1.02
CRAT-203ENST00000415948 NFAT5O94916 1531 aa21.43■■□□□ 1.02
CRAT-203ENST00000415948 PLCH1Q4KWH8 1693 aa21.42■■□□□ 1.02
CRAT-203ENST00000415948 PANK3Q9H999 370 aa21.42■■□□□ 1.02
CRAT-203ENST00000415948 SPATA31A6Q5VVP1 1343 aa21.41■■□□□ 1.02
CRAT-203ENST00000415948 TTC21AQ8NDW8 1320 aa21.4■■□□□ 1.02
CRAT-203ENST00000415948 ABTB2Q8N961 1025 aa21.4■■□□□ 1.02
CRAT-203ENST00000415948 USP31Q70CQ4 1352 aa21.39■■□□□ 1.02
CRAT-203ENST00000415948 LTN1O94822 1766 aa21.38■■□□□ 1.01
CRAT-203ENST00000415948 COL18A1P39060 1754 aa21.38■■□□□ 1.01
CRAT-203ENST00000415948 NRAPQ86VF7 1730 aa21.38■■□□□ 1.01
CRAT-203ENST00000415948 LMO7Q8WWI1 1683 aa21.37■■□□□ 1.01
CRAT-203ENST00000415948 ADAMTS2O95450 1211 aa21.36■■□□□ 1.01
CRAT-203ENST00000415948 RGPD5Q99666 1765 aa21.36■■□□□ 1.01
CRAT-203ENST00000415948 FYB1O15117 783 aa21.35■■□□□ 1.01
CRAT-203ENST00000415948 NLRP6P59044 892 aa21.35■■□□□ 1.01
CRAT-203ENST00000415948 GGNBP2Q9H3C7 697 aa21.35■■□□□ 1.01
CRAT-203ENST00000415948 PER1O15534 1290 aaPredicted RBP21.34■■□□□ 1.01
CRAT-203ENST00000415948 COL14A1Q05707 1796 aaKnown RBP21.33■■□□□ 1.01
CRAT-203ENST00000415948 PEAK1Q9H792 1746 aa21.33■■□□□ 1.01
CRAT-203ENST00000415948 FBLN1P23142 703 aa21.33■■□□□ 1.01
CRAT-203ENST00000415948 RGS17Q9UGC6 210 aaPredicted RBP21.32■■□□□ 1
CRAT-203ENST00000415948 KIAA0232Q92628 1395 aa21.32■■□□□ 1
CRAT-203ENST00000415948 SLIT2O94813 1529 aa21.31■■□□□ 1
CRAT-203ENST00000415948 NWD2Q9ULI1 1742 aa21.3■■□□□ 1
CRAT-203ENST00000415948 SOX12O15370 315 aa21.3■■□□□ 1
CRAT-203ENST00000415948 GCP02774 474 aa21.3■■□□□ 1
CRAT-203ENST00000415948 NLRP13Q86W25 1043 aa21.3■■□□□ 1
CRAT-203ENST00000415948 TNKS1BP1Q9C0C2 1729 aaKnown RBP21.29■■□□□ 1
CRAT-203ENST00000415948 ZC3H6P61129 1189 aaKnown RBP21.29■■□□□ 1
CRAT-203ENST00000415948 AMER1Q5JTC6 1135 aaPredicted RBP21.29■■□□□ 1
CRAT-203ENST00000415948 CAMTA1Q9Y6Y1 1673 aa21.28■■□□□ 1
CRAT-203ENST00000415948 BCL9LQ86UU0 1499 aa21.28■■□□□ 1
CRAT-203ENST00000415948 FAM83GA6ND36 823 aa21.28■■□□□ 1
CRAT-203ENST00000415948 CHRNA2Q15822 529 aa21.28■■□□□ 1
CRAT-203ENST00000415948 C8orf37Q96NL8 207 aa21.28■■□□□ 1
CRAT-203ENST00000415948 CPDO75976 1380 aa21.27■■□□□ 1
CRAT-203ENST00000415948 MAP2P11137 1827 aaKnown RBP21.26■□□□□ 0.99
CRAT-203ENST00000415948 AFF2P51816 1311 aa21.26■□□□□ 0.99
CRAT-203ENST00000415948 CGNL1Q0VF96 1302 aa21.25■□□□□ 0.99
CRAT-203ENST00000415948 ZNF316A6NFI3 1004 aaPredicted RBP21.24■□□□□ 0.99
CRAT-203ENST00000415948 HAP1P54257 671 aaPredicted RBP21.24■□□□□ 0.99
CRAT-203ENST00000415948 MEX3CQ5U5Q3 659 aaKnown RBP21.24■□□□□ 0.99
CRAT-203ENST00000415948 DDX10Q13206 875 aaKnown RBP21.23■□□□□ 0.99
CRAT-203ENST00000415948 ARHGEF25Q86VW2 580 aa21.23■□□□□ 0.99
CRAT-203ENST00000415948 COG3Q96JB2 828 aa21.23■□□□□ 0.99
CRAT-203ENST00000415948 RGPD2P0DJD1 1756 aa21.21■□□□□ 0.99
CRAT-203ENST00000415948 FNBP4Q8N3X1 1017 aaPredicted RBP21.21■□□□□ 0.99
CRAT-203ENST00000415948 PRDM11Q9NQV5 511 aa21.21■□□□□ 0.99
CRAT-203ENST00000415948 GLI3P10071 1580 aa21.21■□□□□ 0.99
CRAT-203ENST00000415948 ZBTB7CA1YPR0 619 aa21.2■□□□□ 0.98
CRAT-203ENST00000415948 RRS1Q15050 365 aaKnown RBP21.2■□□□□ 0.98
CRAT-203ENST00000415948 AXIN2Q9Y2T1 843 aa21.2■□□□□ 0.98
CRAT-203ENST00000415948 KNSTRNQ9Y448 316 aa21.2■□□□□ 0.98
CRAT-203ENST00000415948 NSD2O96028 1365 aa21.2■□□□□ 0.98
CRAT-203ENST00000415948 COL5A2P05997 1499 aaPredicted RBP21.2■□□□□ 0.98
CRAT-203ENST00000415948 ABCC6O95255 1503 aa21.19■□□□□ 0.98
CRAT-203ENST00000415948 CC2D1BQ5T0F9 858 aaKnown RBP21.19■□□□□ 0.98
CRAT-203ENST00000415948 POTEAQ6S8J7 498 aa21.19■□□□□ 0.98
CRAT-203ENST00000415948 NGLY1Q96IV0 654 aa21.19■□□□□ 0.98
CRAT-203ENST00000415948 MAP3K19Q56UN5 1328 aa21.19■□□□□ 0.98
CRAT-203ENST00000415948 ATRNO75882 1429 aa21.19■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms