RNA–Protein interactions for RNA: ENST00000415919.2

PRAMEF9-201, Transcript of PRAME family member 9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRAMEF9, Length 1,863 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF9-201ENST00000415919 USP6P35125 1406 aa16.87■□□□□ 0.29
PRAMEF9-201ENST00000415919 TTC21BQ7Z4L5 1316 aa16.87■□□□□ 0.29
PRAMEF9-201ENST00000415919 KIF20BQ96Q89 1820 aa16.86■□□□□ 0.29
PRAMEF9-201ENST00000415919 HNRNPUQ00839 825 aaKnown RBP eCLIP16.86■□□□□ 0.29
PRAMEF9-201ENST00000415919 COG3Q96JB2 828 aa16.85■□□□□ 0.29
PRAMEF9-201ENST00000415919 MSH6P52701 1360 aa16.85■□□□□ 0.29
PRAMEF9-201ENST00000415919 ANKRD26Q9UPS8 1709 aa16.84■□□□□ 0.29
PRAMEF9-201ENST00000415919 ZRANB1Q9UGI0 708 aa16.84■□□□□ 0.29
PRAMEF9-201ENST00000415919 MTHFSP49914 203 aa16.83■□□□□ 0.28
PRAMEF9-201ENST00000415919 WDR43Q15061 677 aaKnown RBP eCLIP16.83■□□□□ 0.28
PRAMEF9-201ENST00000415919 CADPS2Q86UW7 1296 aa16.83■□□□□ 0.28
PRAMEF9-201ENST00000415919 ORAI2Q96SN7 254 aa16.83■□□□□ 0.28
PRAMEF9-201ENST00000415919 TTC21AQ8NDW8 1320 aa16.83■□□□□ 0.28
PRAMEF9-201ENST00000415919 CFAP53Q96M91 514 aa16.82■□□□□ 0.28
PRAMEF9-201ENST00000415919 DCCP43146 1447 aa16.82■□□□□ 0.28
PRAMEF9-201ENST00000415919 LRRC7Q96NW7 1537 aa16.82■□□□□ 0.28
PRAMEF9-201ENST00000415919 PSME1Q06323 249 aa16.82■□□□□ 0.28
PRAMEF9-201ENST00000415919 NRKQ7Z2Y5 1582 aa16.81■□□□□ 0.28
PRAMEF9-201ENST00000415919 C1orf167Q5SNV9 1468 aa16.81■□□□□ 0.28
PRAMEF9-201ENST00000415919 PAK3O75914 559 aaPredicted RBP16.81■□□□□ 0.28
PRAMEF9-201ENST00000415919 SSH2Q76I76 1423 aa16.8■□□□□ 0.28
PRAMEF9-201ENST00000415919 MST1RQ04912 1400 aa16.79■□□□□ 0.28
PRAMEF9-201ENST00000415919 FOXO3O43524 673 aa16.78■□□□□ 0.28
PRAMEF9-201ENST00000415919 PPM1GO15355 546 aaPredicted RBP16.77■□□□□ 0.27
PRAMEF9-201ENST00000415919 FBLN1P23142 703 aa16.77■□□□□ 0.27
PRAMEF9-201ENST00000415919 ADAMTS8Q9UP79 889 aa16.77■□□□□ 0.27
PRAMEF9-201ENST00000415919 XIRP1Q702N8 1843 aaKnown RBP16.77■□□□□ 0.27
PRAMEF9-201ENST00000415919 AEBP2Q6ZN18 517 aaPredicted RBP16.76■□□□□ 0.27
PRAMEF9-201ENST00000415919 ABTB2Q8N961 1025 aa16.76■□□□□ 0.27
PRAMEF9-201ENST00000415919 NLRP6P59044 892 aa16.76■□□□□ 0.27
PRAMEF9-201ENST00000415919 OVOS2A0A0J9YW53 1432 aa16.75■□□□□ 0.27
PRAMEF9-201ENST00000415919 OVOS2Q6IE36 1432 aa16.75■□□□□ 0.27
PRAMEF9-201ENST00000415919 XPCQ01831 940 aaPredicted RBP16.75■□□□□ 0.27
PRAMEF9-201ENST00000415919 NUTM2GQ5VZR2 741 aa16.75■□□□□ 0.27
PRAMEF9-201ENST00000415919 POLKQ9UBT6 870 aa16.75■□□□□ 0.27
PRAMEF9-201ENST00000415919 KRT28Q7Z3Y7 464 aa16.74■□□□□ 0.27
PRAMEF9-201ENST00000415919 AATKQ6ZMQ8 1374 aa16.74■□□□□ 0.27
PRAMEF9-201ENST00000415919 KIF1AQ12756 1690 aa16.74■□□□□ 0.27
PRAMEF9-201ENST00000415919 SOX12O15370 315 aa16.73■□□□□ 0.27
PRAMEF9-201ENST00000415919 USP31Q70CQ4 1352 aa16.73■□□□□ 0.27
PRAMEF9-201ENST00000415919 SENP3-EIF4A1A0A087X0R7 540 aa16.73■□□□□ 0.27
PRAMEF9-201ENST00000415919 RRS1Q15050 365 aaKnown RBP16.73■□□□□ 0.27
PRAMEF9-201ENST00000415919 EMILIN1Q9Y6C2 1016 aa16.73■□□□□ 0.27
PRAMEF9-201ENST00000415919 INSRP06213 1382 aa16.72■□□□□ 0.27
PRAMEF9-201ENST00000415919 NUDCQ9Y266 331 aa16.72■□□□□ 0.27
PRAMEF9-201ENST00000415919 SLAIN2Q9P270 581 aa16.71■□□□□ 0.27
PRAMEF9-201ENST00000415919 PIK3C2AO00443 1686 aa16.71■□□□□ 0.27
PRAMEF9-201ENST00000415919 LMOD2Q6P5Q4 547 aa16.71■□□□□ 0.27
PRAMEF9-201ENST00000415919 ERICH6Q7L0X2 663 aa16.71■□□□□ 0.27
PRAMEF9-201ENST00000415919 ZBED9Q6R2W3 1325 aa16.71■□□□□ 0.26
PRAMEF9-201ENST00000415919 DIAPH1O60610 1272 aaKnown RBP16.7■□□□□ 0.26
PRAMEF9-201ENST00000415919 BLMP54132 1417 aaPredicted RBP16.7■□□□□ 0.26
PRAMEF9-201ENST00000415919 U2SURPO15042 1029 aaKnown RBP16.69■□□□□ 0.26
PRAMEF9-201ENST00000415919 MAP2P11137 1827 aaKnown RBP16.69■□□□□ 0.26
PRAMEF9-201ENST00000415919 NPHP3Q7Z494 1330 aa16.69■□□□□ 0.26
PRAMEF9-201ENST00000415919 CCDC146Q8IYE0 955 aa16.69■□□□□ 0.26
PRAMEF9-201ENST00000415919 DDX17Q92841 729 aaKnown RBP16.69■□□□□ 0.26
PRAMEF9-201ENST00000415919 PNPLA6Q8IY17 1366 aa16.68■□□□□ 0.26
PRAMEF9-201ENST00000415919 U2AF1L5P0DN76 240 aaPredicted RBP16.68■□□□□ 0.26
PRAMEF9-201ENST00000415919 U2AF1Q01081 240 aaKnown RBP eCLIP16.68■□□□□ 0.26
PRAMEF9-201ENST00000415919 BRINP3Q76B58 766 aa16.68■□□□□ 0.26
PRAMEF9-201ENST00000415919 SALL2Q9Y467 1007 aaPredicted RBP16.68■□□□□ 0.26
PRAMEF9-201ENST00000415919 SHPRHQ149N8 1683 aa16.67■□□□□ 0.26
PRAMEF9-201ENST00000415919 SMG6Q86US8 1419 aaKnown RBP16.67■□□□□ 0.26
PRAMEF9-201ENST00000415919 COL3A1P02461 1466 aaPredicted RBP16.67■□□□□ 0.26
PRAMEF9-201ENST00000415919 PLEKHG5O94827 1062 aa16.66■□□□□ 0.26
PRAMEF9-201ENST00000415919 CDK12Q9NYV4 1490 aaPredicted RBP16.66■□□□□ 0.26
PRAMEF9-201ENST00000415919 AMPHP49418 695 aa16.65■□□□□ 0.26
PRAMEF9-201ENST00000415919 MAP3K19Q56UN5 1328 aa16.65■□□□□ 0.26
PRAMEF9-201ENST00000415919 LTBP4Q8N2S1 1624 aa16.65■□□□□ 0.26
PRAMEF9-201ENST00000415919 KCNH5Q8NCM2 988 aa16.64■□□□□ 0.25
PRAMEF9-201ENST00000415919 TRPM3Q9HCF6 1732 aaPredicted RBP16.64■□□□□ 0.25
PRAMEF9-201ENST00000415919 USP54Q70EL1 1684 aa16.63■□□□□ 0.25
PRAMEF9-201ENST00000415919 SBNO1A3KN83 1393 aa16.63■□□□□ 0.25
PRAMEF9-201ENST00000415919 RUNDC1Q96C34 613 aa16.63■□□□□ 0.25
PRAMEF9-201ENST00000415919 APAF1O14727 1248 aa16.62■□□□□ 0.25
PRAMEF9-201ENST00000415919 IL13P35225 146 aa16.62■□□□□ 0.25
PRAMEF9-201ENST00000415919 MARF1Q9Y4F3 1742 aaKnown RBP16.61■□□□□ 0.25
PRAMEF9-201ENST00000415919 ZBTB7CA1YPR0 619 aa16.61■□□□□ 0.25
PRAMEF9-201ENST00000415919 HSP90AB2PQ58FF8 381 aa16.61■□□□□ 0.25
PRAMEF9-201ENST00000415919 PNNQ9H307 717 aaKnown RBP16.61■□□□□ 0.25
PRAMEF9-201ENST00000415919 FLT4P35916 1363 aa16.6■□□□□ 0.25
PRAMEF9-201ENST00000415919 PXDNQ92626 1479 aa16.6■□□□□ 0.25
PRAMEF9-201ENST00000415919 GCP02774 474 aa16.6■□□□□ 0.25
PRAMEF9-201ENST00000415919 PRKCSHP14314 528 aaPredicted RBP16.59■□□□□ 0.25
PRAMEF9-201ENST00000415919 EIF4A2Q14240 407 aaKnown RBP16.59■□□□□ 0.25
PRAMEF9-201ENST00000415919 TNS3Q68CZ2 1445 aa16.59■□□□□ 0.25
PRAMEF9-201ENST00000415919 SPATA31A3Q5VYP0 1347 aa16.59■□□□□ 0.25
PRAMEF9-201ENST00000415919 PEAK1Q9H792 1746 aa16.59■□□□□ 0.25
PRAMEF9-201ENST00000415919 BCL11AQ9H165 835 aa16.59■□□□□ 0.25
PRAMEF9-201ENST00000415919 USP19O94966 1318 aa16.58■□□□□ 0.24
PRAMEF9-201ENST00000415919 FCHSD2O94868 740 aa16.58■□□□□ 0.24
PRAMEF9-201ENST00000415919 HOXC9P31274 260 aa16.58■□□□□ 0.24
PRAMEF9-201ENST00000415919 KIF24Q5T7B8 1368 aa16.58■□□□□ 0.24
PRAMEF9-201ENST00000415919 MAPK8IP3Q9UPT6 1336 aa16.57■□□□□ 0.24
PRAMEF9-201ENST00000415919 ALS2Q96Q42 1657 aa16.57■□□□□ 0.24
PRAMEF9-201ENST00000415919 NEFMP07197 916 aa16.57■□□□□ 0.24
PRAMEF9-201ENST00000415919 HMOX1P09601 288 aa16.57■□□□□ 0.24
PRAMEF9-201ENST00000415919 TCP11L2Q8N4U5 519 aa16.57■□□□□ 0.24
PRAMEF9-201ENST00000415919 ARHGEF10O15013 1369 aa16.57■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms