RNA–Protein interactions for RNA: ENST00000415683.2

GTF3C2-203, Transcript of general transcription factor IIIC subunit 2, humanhuman

TSL 5

Gene GTF3C2, Length 779 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C2-203ENST00000415683 ZNF316A6NFI3 1004 aaPredicted RBP6.87□□□□□ -1.31
GTF3C2-203ENST00000415683 FCHSD2O94868 740 aa6.87□□□□□ -1.31
GTF3C2-203ENST00000415683 FBXO31Q5XUX0 539 aaPredicted RBP6.87□□□□□ -1.31
GTF3C2-203ENST00000415683 POLR3GLQ9BT43 218 aa6.87□□□□□ -1.31
GTF3C2-203ENST00000415683 GOPCQ9HD26 462 aa6.87□□□□□ -1.31
GTF3C2-203ENST00000415683 CDC42BPBQ9Y5S2 1711 aa6.87□□□□□ -1.31
GTF3C2-203ENST00000415683 DIP2CQ9Y2E4 1556 aa6.86□□□□□ -1.31
GTF3C2-203ENST00000415683 ATP7AQ04656 1500 aa6.86□□□□□ -1.31
GTF3C2-203ENST00000415683 DISP3Q9P2K9 1392 aa6.86□□□□□ -1.31
GTF3C2-203ENST00000415683 SUPT6HQ7KZ85 1726 aaKnown RBP6.86□□□□□ -1.31
GTF3C2-203ENST00000415683 AGLP35573 1532 aa6.86□□□□□ -1.31
GTF3C2-203ENST00000415683 MAP3K1Q13233 1512 aa6.86□□□□□ -1.31
GTF3C2-203ENST00000415683 GPR153Q6NV75 609 aa6.85□□□□□ -1.31
GTF3C2-203ENST00000415683 THEMISQ8N1K5 641 aaPredicted RBP6.85□□□□□ -1.31
GTF3C2-203ENST00000415683 KCTD17Q8N5Z5 321 aa6.85□□□□□ -1.31
GTF3C2-203ENST00000415683 CDC42BPAQ5VT25 1732 aa6.84□□□□□ -1.31
GTF3C2-203ENST00000415683 KANK1Q14678 1352 aa6.84□□□□□ -1.31
GTF3C2-203ENST00000415683 ANKRD30AQ9BXX3 1397 aa6.84□□□□□ -1.31
GTF3C2-203ENST00000415683 RAD21O60216 631 aa6.84□□□□□ -1.31
GTF3C2-203ENST00000415683 FECHP22830 423 aa6.84□□□□□ -1.31
GTF3C2-203ENST00000415683 FGD1P98174 961 aa6.84□□□□□ -1.31
GTF3C2-203ENST00000415683 PTGDRQ13258 359 aa6.84□□□□□ -1.31
GTF3C2-203ENST00000415683 ABCA6Q8N139 1617 aa6.83□□□□□ -1.32
GTF3C2-203ENST00000415683 KIF15Q9NS87 1388 aa6.83□□□□□ -1.32
GTF3C2-203ENST00000415683 PRIM1P49642 420 aaKnown RBP6.83□□□□□ -1.32
GTF3C2-203ENST00000415683 ANKLE2Q86XL3 938 aa6.83□□□□□ -1.32
GTF3C2-203ENST00000415683 UPF1Q92900 1129 aaKnown RBP eCLIP6.83□□□□□ -1.32
GTF3C2-203ENST00000415683 ITSN2Q9NZM3 1697 aa6.83□□□□□ -1.32
GTF3C2-203ENST00000415683 TBC1D12O60347 775 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 FLIIQ13045 1269 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 ARSIQ5FYB1 569 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 ANKRD13DQ6ZTN6 518 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 DDX12PQ92771 950 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 ABCC5O15440 1437 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 NPATQ14207 1427 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 FGD6Q6ZV73 1430 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 STRCQ7RTU9 1775 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 KIDINS220Q9ULH0 1771 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 REREQ9P2R6 1566 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 TNRQ92752 1358 aa6.82□□□□□ -1.32
GTF3C2-203ENST00000415683 ONECUT3O60422 494 aaPredicted RBP6.81□□□□□ -1.32
GTF3C2-203ENST00000415683 EVI5O60447 810 aa6.81□□□□□ -1.32
GTF3C2-203ENST00000415683 ZNF326Q5BKZ1 582 aaKnown RBP6.81□□□□□ -1.32
GTF3C2-203ENST00000415683 PTCD2Q8WV60 388 aaKnown RBP6.81□□□□□ -1.32
GTF3C2-203ENST00000415683 ANO8Q9HCE9 1232 aaPredicted RBP6.81□□□□□ -1.32
GTF3C2-203ENST00000415683 DAPK1P53355 1430 aa6.8□□□□□ -1.32
GTF3C2-203ENST00000415683 PTPRKQ15262 1439 aa6.8□□□□□ -1.32
GTF3C2-203ENST00000415683 TMUB1Q9BVT8 246 aa6.8□□□□□ -1.32
GTF3C2-203ENST00000415683 EID1Q9Y6B2 187 aa6.8□□□□□ -1.32
GTF3C2-203ENST00000415683 FER1L4A9Z1Z3 1794 aa6.8□□□□□ -1.32
GTF3C2-203ENST00000415683 SLC34A2O95436 690 aa6.79□□□□□ -1.32
GTF3C2-203ENST00000415683 TICAM2Q86XR7 235 aa6.79□□□□□ -1.32
GTF3C2-203ENST00000415683 MTMR7Q9Y216 660 aa6.79□□□□□ -1.32
GTF3C2-203ENST00000415683 INO80Q9ULG1 1556 aaPredicted RBP6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 MS4A1P11836 297 aa6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 HDGFP51858 240 aaKnown RBP6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 TTLL12Q14166 644 aaPredicted RBP6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 GIGYF2Q6Y7W6 1299 aaKnown RBP6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 TXNDC2Q86VQ3 553 aa6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 KHSRPQ92945 711 aaKnown RBP eCLIP6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 TRIM52Q96A61 297 aa6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 ARHGEF5Q12774 1597 aa6.78□□□□□ -1.32
GTF3C2-203ENST00000415683 DUOX2Q9NRD8 1548 aa6.77□□□□□ -1.33
GTF3C2-203ENST00000415683 UBAP1LF5GYI3 381 aa6.77□□□□□ -1.33
GTF3C2-203ENST00000415683 LSM11P83369 360 aaKnown RBP eCLIP6.77□□□□□ -1.33
GTF3C2-203ENST00000415683 REPIN1Q9BWE0 567 aaKnown RBP6.77□□□□□ -1.33
GTF3C2-203ENST00000415683 NPDC1Q9NQX5 325 aaPredicted RBP6.77□□□□□ -1.33
GTF3C2-203ENST00000415683 ZNF335Q9H4Z2 1342 aaPredicted RBP6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 PTPRTO14522 1441 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 NCOA1Q15788 1441 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 LTBP4Q8N2S1 1624 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 PTPN23Q9H3S7 1636 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 PPP1R15AO75807 674 aaPredicted RBP6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 PHF14O94880 888 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 EN1Q05925 392 aaPredicted RBP6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 EPAS1Q99814 870 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 SLC52A1Q9NWF4 448 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 KDM5DQ9BY66 1539 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 FAM135AQ9P2D6 1515 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 ERBINQ96RT1 1412 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 ANKRD50Q9ULJ7 1429 aa6.76□□□□□ -1.33
GTF3C2-203ENST00000415683 ADGBQ8N7X0 1667 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 PLXNC1O60486 1568 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 SPATA31D1Q6ZQQ2 1576 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 A2ML1A8K2U0 1454 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 PZPP20742 1482 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 TCOF1Q13428 1488 aaKnown RBP6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 CLSTN1O94985 981 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 RBM25P49756 843 aaKnown RBP6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 IDI1Q13907 227 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 SH3D19Q5HYK7 790 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 ZNF428Q96B54 188 aa6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 GTF3C5Q9Y5Q8 519 aaPredicted RBP6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 SETD1BQ9UPS6 1966 aaKnown RBP6.75□□□□□ -1.33
GTF3C2-203ENST00000415683 CLTCQ00610 1675 aaKnown RBP6.74□□□□□ -1.33
GTF3C2-203ENST00000415683 SHANK2Q9UPX8 1470 aa6.74□□□□□ -1.33
GTF3C2-203ENST00000415683 NUP155O75694 1391 aa6.74□□□□□ -1.33
GTF3C2-203ENST00000415683 A6NJR5 290 aa6.74□□□□□ -1.33
GTF3C2-203ENST00000415683 CLCN1P35523 988 aa6.74□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms