RNA–Protein interactions for RNA: ENST00000415579.2

PTCD2P2-201, Transcript of pentatricopeptide repeat domain 2 pseudogene 2, humanhuman

BASIC

Gene PTCD2P2, Length 1,095 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2P2-201ENST00000415579 WASF2Q9Y6W5 498 aa11.37□□□□□ -0.59
PTCD2P2-201ENST00000415579 DESI1Q6ICB0 168 aa11.36□□□□□ -0.59
PTCD2P2-201ENST00000415579 LYPD8Q6UX82 237 aa11.36□□□□□ -0.59
PTCD2P2-201ENST00000415579 ZNF511Q8NB15 262 aa11.36□□□□□ -0.59
PTCD2P2-201ENST00000415579 MAP10Q9P2G4 905 aa11.36□□□□□ -0.59
PTCD2P2-201ENST00000415579 BMP1P13497 986 aa11.35□□□□□ -0.59
PTCD2P2-201ENST00000415579 QPCTQ16769 361 aa11.35□□□□□ -0.59
PTCD2P2-201ENST00000415579 TSC1Q92574 1164 aa11.35□□□□□ -0.59
PTCD2P2-201ENST00000415579 ZBTB3Q9H5J0 574 aa11.35□□□□□ -0.59
PTCD2P2-201ENST00000415579 PER1O15534 1290 aaPredicted RBP11.34□□□□□ -0.59
PTCD2P2-201ENST00000415579 GJA5P36382 358 aa11.34□□□□□ -0.59
PTCD2P2-201ENST00000415579 DIXDC1Q155Q3 683 aa11.34□□□□□ -0.59
PTCD2P2-201ENST00000415579 MYSM1Q5VVJ2 828 aa11.34□□□□□ -0.59
PTCD2P2-201ENST00000415579 TRIM47Q96LD4 638 aa11.33□□□□□ -0.6
PTCD2P2-201ENST00000415579 WFS1O76024 890 aa11.32□□□□□ -0.6
PTCD2P2-201ENST00000415579 FOXJ1Q92949 421 aa11.32□□□□□ -0.6
PTCD2P2-201ENST00000415579 NACADO15069 1562 aa11.32□□□□□ -0.6
PTCD2P2-201ENST00000415579 CAPN5O15484 640 aaPredicted RBP11.31□□□□□ -0.6
PTCD2P2-201ENST00000415579 NFX1Q12986 1120 aaKnown RBP11.31□□□□□ -0.6
PTCD2P2-201ENST00000415579 NUTM2BA6NNL0 878 aaPredicted RBP11.3□□□□□ -0.6
PTCD2P2-201ENST00000415579 NUTM2EB1AL46 878 aaPredicted RBP11.3□□□□□ -0.6
PTCD2P2-201ENST00000415579 NUTM2DQ5VT03 806 aaPredicted RBP11.3□□□□□ -0.6
PTCD2P2-201ENST00000415579 TRIM46Q7Z4K8 759 aa11.3□□□□□ -0.6
PTCD2P2-201ENST00000415579 NUTM2AQ8IVF1 878 aaPredicted RBP11.3□□□□□ -0.6
PTCD2P2-201ENST00000415579 SENP2Q9HC62 589 aa11.3□□□□□ -0.6
PTCD2P2-201ENST00000415579 F12P00748 615 aaPredicted RBP11.29□□□□□ -0.6
PTCD2P2-201ENST00000415579 LCE2CQ5TA81 110 aa11.29□□□□□ -0.6
PTCD2P2-201ENST00000415579 VARSP26640 1264 aaKnown RBP11.28□□□□□ -0.6
PTCD2P2-201ENST00000415579 RTL5Q5HYW3 569 aaPredicted RBP11.28□□□□□ -0.6
PTCD2P2-201ENST00000415579 PRPF38BQ5VTL8 546 aaKnown RBP11.28□□□□□ -0.6
PTCD2P2-201ENST00000415579 POLR3EQ9NVU0 708 aa11.28□□□□□ -0.6
PTCD2P2-201ENST00000415579 NNTQ13423 1086 aa11.26□□□□□ -0.61
PTCD2P2-201ENST00000415579 ARID5BQ14865 1188 aa11.26□□□□□ -0.61
PTCD2P2-201ENST00000415579 LILRB3O75022 631 aa11.25□□□□□ -0.61
PTCD2P2-201ENST00000415579 C4orf48Q5BLP8 95 aa11.25□□□□□ -0.61
PTCD2P2-201ENST00000415579 TERTO14746 1132 aaKnown RBP11.24□□□□□ -0.61
PTCD2P2-201ENST00000415579 AGERQ15109 404 aa11.23□□□□□ -0.61
PTCD2P2-201ENST00000415579 KIFC2Q96AC6 838 aa11.23□□□□□ -0.61
PTCD2P2-201ENST00000415579 PLEKHG3A1L390 1219 aa11.22□□□□□ -0.61
PTCD2P2-201ENST00000415579 CLK2P49760 499 aaKnown RBP11.21□□□□□ -0.61
PTCD2P2-201ENST00000415579 WDR4P57081 412 aaKnown RBP11.21□□□□□ -0.61
PTCD2P2-201ENST00000415579 FAM174AQ8TBP5 190 aa11.21□□□□□ -0.61
PTCD2P2-201ENST00000415579 ZFP42Q96MM3 310 aa11.21□□□□□ -0.61
PTCD2P2-201ENST00000415579 TIMP2P16035 220 aa11.2□□□□□ -0.62
PTCD2P2-201ENST00000415579 VEGFBP49765 207 aa11.2□□□□□ -0.62
PTCD2P2-201ENST00000415579 FBXO31Q5XUX0 539 aaPredicted RBP11.2□□□□□ -0.62
PTCD2P2-201ENST00000415579 SHROOM4Q9ULL8 1493 aa11.19□□□□□ -0.62
PTCD2P2-201ENST00000415579 MPNDQ8N594 471 aa11.19□□□□□ -0.62
PTCD2P2-201ENST00000415579 GPBP1L1Q9HC44 474 aaPredicted RBP11.19□□□□□ -0.62
PTCD2P2-201ENST00000415579 ADH1CP00326 375 aa11.18□□□□□ -0.62
PTCD2P2-201ENST00000415579 KLF16Q9BXK1 252 aaPredicted RBP11.18□□□□□ -0.62
PTCD2P2-201ENST00000415579 ZFAND3Q9H8U3 227 aa11.18□□□□□ -0.62
PTCD2P2-201ENST00000415579 RB1CC1Q8TDY2 1594 aa11.18□□□□□ -0.62
PTCD2P2-201ENST00000415579 SOBPA7XYQ1 873 aa11.17□□□□□ -0.62
PTCD2P2-201ENST00000415579 NR3C2P08235 984 aa11.17□□□□□ -0.62
PTCD2P2-201ENST00000415579 CTDSPL2Q05D32 466 aa11.17□□□□□ -0.62
PTCD2P2-201ENST00000415579 TUSC1Q2TAM9 212 aa11.17□□□□□ -0.62
PTCD2P2-201ENST00000415579 CDK15Q96Q40 435 aa11.17□□□□□ -0.62
PTCD2P2-201ENST00000415579 PURBQ96QR8 312 aaKnown RBP11.17□□□□□ -0.62
PTCD2P2-201ENST00000415579 GRM5P41594 1212 aa11.16□□□□□ -0.62
PTCD2P2-201ENST00000415579 MRPL14Q6P1L8 145 aaKnown RBP11.15□□□□□ -0.62
PTCD2P2-201ENST00000415579 BPHLQ86WA6 291 aaPredicted RBP11.15□□□□□ -0.62
PTCD2P2-201ENST00000415579 PROCA1Q8NCQ7 364 aaPredicted RBP11.15□□□□□ -0.62
PTCD2P2-201ENST00000415579 HELBQ8NG08 1087 aaPredicted RBP11.15□□□□□ -0.62
PTCD2P2-201ENST00000415579 ITPKCQ96DU7 683 aa11.15□□□□□ -0.62
PTCD2P2-201ENST00000415579 ZIC2O95409 532 aaPredicted RBP11.14□□□□□ -0.63
PTCD2P2-201ENST00000415579 NXF1Q9UBU9 619 aaKnown RBP11.14□□□□□ -0.63
PTCD2P2-201ENST00000415579 MAGEB6P1A0A0J9YX57 407 aa11.13□□□□□ -0.63
PTCD2P2-201ENST00000415579 LRRN4Q8WUT4 740 aa11.13□□□□□ -0.63
PTCD2P2-201ENST00000415579 FAM117AQ9C073 453 aa11.13□□□□□ -0.63
PTCD2P2-201ENST00000415579 RSPH6AQ9H0K4 717 aa11.13□□□□□ -0.63
PTCD2P2-201ENST00000415579 WIPF1O43516 503 aa11.12□□□□□ -0.63
PTCD2P2-201ENST00000415579 CARD14Q9BXL6 1004 aa11.12□□□□□ -0.63
PTCD2P2-201ENST00000415579 KDM4CQ9H3R0 1056 aa11.12□□□□□ -0.63
PTCD2P2-201ENST00000415579 ATP1B4Q9UN42 357 aaPredicted RBP11.12□□□□□ -0.63
PTCD2P2-201ENST00000415579 C6orf118Q5T5N4 469 aa11.11□□□□□ -0.63
PTCD2P2-201ENST00000415579 SH3RF1Q7Z6J0 888 aa11.11□□□□□ -0.63
PTCD2P2-201ENST00000415579 SCARF1Q14162 830 aa11.1□□□□□ -0.63
PTCD2P2-201ENST00000415579 SH3BP5LQ7L8J4 393 aa11.1□□□□□ -0.63
PTCD2P2-201ENST00000415579 NR5A1Q13285 461 aa11.09□□□□□ -0.63
PTCD2P2-201ENST00000415579 ARMC2Q8NEN0 867 aa11.09□□□□□ -0.63
PTCD2P2-201ENST00000415579 FSHRP23945 695 aa11.08□□□□□ -0.64
PTCD2P2-201ENST00000415579 SLC16A10Q8TF71 515 aa11.08□□□□□ -0.64
PTCD2P2-201ENST00000415579 C1QTNF2Q9BXJ5 285 aa11.08□□□□□ -0.64
PTCD2P2-201ENST00000415579 GMPRP36959 345 aa11.07□□□□□ -0.64
PTCD2P2-201ENST00000415579 SKIV2LQ15477 1246 aaKnown RBP11.07□□□□□ -0.64
PTCD2P2-201ENST00000415579 NBPF14Q5TI25 921 aa11.07□□□□□ -0.64
PTCD2P2-201ENST00000415579 VASH1Q7L8A9 365 aaPredicted RBP11.07□□□□□ -0.64
PTCD2P2-201ENST00000415579 NR6A1Q15406 480 aa11.06□□□□□ -0.64
PTCD2P2-201ENST00000415579 ERBB4Q15303 1308 aa11.06□□□□□ -0.64
PTCD2P2-201ENST00000415579 SCRIBQ14160 1630 aa11.06□□□□□ -0.64
PTCD2P2-201ENST00000415579 INSM1Q01101 510 aaPredicted RBP11.04□□□□□ -0.64
PTCD2P2-201ENST00000415579 H3BM21 787 aa11.03□□□□□ -0.64
PTCD2P2-201ENST00000415579 BMP2P12643 396 aa11.03□□□□□ -0.64
PTCD2P2-201ENST00000415579 ERFEQ4G0M1 354 aa11.03□□□□□ -0.64
PTCD2P2-201ENST00000415579 SH3D19Q5HYK7 790 aa11.03□□□□□ -0.64
PTCD2P2-201ENST00000415579 GNL3Q9BVP2 549 aaKnown RBP eCLIP11.03□□□□□ -0.64
PTCD2P2-201ENST00000415579 AP1G2O75843 785 aa11.02□□□□□ -0.65
PTCD2P2-201ENST00000415579 EPS8L1Q8TE68 723 aa11.02□□□□□ -0.65
PTCD2P2-201ENST00000415579 TRMT44Q8IYL2 757 aaKnown RBP11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms