RNA–Protein interactions for RNA: ENST00000415395.6

RFFL-205, Transcript of ring finger and FYVE like domain containing E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RFFL, Length 1,706 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFFL-205ENST00000415395 WDR43Q15061 677 aaKnown RBP eCLIP15.32■□□□□ 0.04
RFFL-205ENST00000415395 SHPRHQ149N8 1683 aa15.32■□□□□ 0.04
RFFL-205ENST00000415395 USP6P35125 1406 aa15.32■□□□□ 0.04
RFFL-205ENST00000415395 CFAP53Q96M91 514 aa15.31■□□□□ 0.04
RFFL-205ENST00000415395 GGNBP2Q9H3C7 697 aa15.31■□□□□ 0.04
RFFL-205ENST00000415395 ACEP12821 1306 aa15.31■□□□□ 0.04
RFFL-205ENST00000415395 SSH2Q76I76 1423 aa15.3■□□□□ 0.04
RFFL-205ENST00000415395 NUDCQ9Y266 331 aa15.29■□□□□ 0.04
RFFL-205ENST00000415395 STRCP1A6NGW2 1772 aa15.29■□□□□ 0.04
RFFL-205ENST00000415395 TTC21AQ8NDW8 1320 aa15.28■□□□□ 0.04
RFFL-205ENST00000415395 USP54Q70EL1 1684 aa15.28■□□□□ 0.04
RFFL-205ENST00000415395 MTHFSP49914 203 aa15.28■□□□□ 0.04
RFFL-205ENST00000415395 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.28■□□□□ 0.04
RFFL-205ENST00000415395 AATKQ6ZMQ8 1374 aa15.28■□□□□ 0.04
RFFL-205ENST00000415395 MAP2P11137 1827 aaKnown RBP15.27■□□□□ 0.04
RFFL-205ENST00000415395 ADAMTS8Q9UP79 889 aa15.27■□□□□ 0.04
RFFL-205ENST00000415395 TTC21BQ7Z4L5 1316 aa15.27■□□□□ 0.04
RFFL-205ENST00000415395 DCCP43146 1447 aa15.27■□□□□ 0.04
RFFL-205ENST00000415395 TNNT2P45379 298 aaPredicted RBP15.26■□□□□ 0.03
RFFL-205ENST00000415395 HSPA2P54652 639 aa15.26■□□□□ 0.03
RFFL-205ENST00000415395 LRRC7Q96NW7 1537 aa15.26■□□□□ 0.03
RFFL-205ENST00000415395 PROSER2Q86WR7 435 aaPredicted RBP15.26■□□□□ 0.03
RFFL-205ENST00000415395 COG3Q96JB2 828 aa15.26■□□□□ 0.03
RFFL-205ENST00000415395 COL3A1P02461 1466 aaPredicted RBP15.25■□□□□ 0.03
RFFL-205ENST00000415395 OVOS2A0A0J9YW53 1432 aa15.25■□□□□ 0.03
RFFL-205ENST00000415395 OVOS2Q6IE36 1432 aa15.25■□□□□ 0.03
RFFL-205ENST00000415395 PNPLA6Q8IY17 1366 aa15.25■□□□□ 0.03
RFFL-205ENST00000415395 NUTM2FA1L443 756 aa15.25■□□□□ 0.03
RFFL-205ENST00000415395 NGDNQ8NEJ9 315 aaKnown RBP15.25■□□□□ 0.03
RFFL-205ENST00000415395 KIF1AQ12756 1690 aa15.25■□□□□ 0.03
RFFL-205ENST00000415395 RNF123Q5XPI4 1314 aa15.24■□□□□ 0.03
RFFL-205ENST00000415395 NME9Q86XW9 330 aa15.24■□□□□ 0.03
RFFL-205ENST00000415395 NGEFQ8N5V2 710 aa15.24■□□□□ 0.03
RFFL-205ENST00000415395 MSH5O43196 834 aa15.23■□□□□ 0.03
RFFL-205ENST00000415395 USP31Q70CQ4 1352 aa15.23■□□□□ 0.03
RFFL-205ENST00000415395 PDE3BQ13370 1112 aa15.23■□□□□ 0.03
RFFL-205ENST00000415395 C14orf37Q86TY3 774 aa15.23■□□□□ 0.03
RFFL-205ENST00000415395 C19orf44Q9H6X5 657 aa15.23■□□□□ 0.03
RFFL-205ENST00000415395 CDK12Q9NYV4 1490 aaPredicted RBP15.23■□□□□ 0.03
RFFL-205ENST00000415395 PIK3C2AO00443 1686 aa15.22■□□□□ 0.03
RFFL-205ENST00000415395 B4GALNT3Q6L9W6 998 aa15.22■□□□□ 0.03
RFFL-205ENST00000415395 PMFBP1Q8TBY8 1022 aa15.22■□□□□ 0.03
RFFL-205ENST00000415395 PHF8Q9UPP1 1060 aa15.22■□□□□ 0.03
RFFL-205ENST00000415395 XIRP1Q702N8 1843 aaKnown RBP15.2■□□□□ 0.02
RFFL-205ENST00000415395 TMEM94Q12767 1356 aa15.19■□□□□ 0.02
RFFL-205ENST00000415395 CCDC136Q96JN2 1154 aa15.19■□□□□ 0.02
RFFL-205ENST00000415395 POLKQ9UBT6 870 aa15.19■□□□□ 0.02
RFFL-205ENST00000415395 MARF1Q9Y4F3 1742 aaKnown RBP15.18■□□□□ 0.02
RFFL-205ENST00000415395 NCBP3Q53F19 620 aaKnown RBP15.18■□□□□ 0.02
RFFL-205ENST00000415395 C1orf167Q5SNV9 1468 aa15.18■□□□□ 0.02
RFFL-205ENST00000415395 RBM33Q96EV2 1170 aaKnown RBP15.17■□□□□ 0.02
RFFL-205ENST00000415395 DMRT2Q9Y5R5 561 aa15.17■□□□□ 0.02
RFFL-205ENST00000415395 DIAPH1O60610 1272 aaKnown RBP15.17■□□□□ 0.02
RFFL-205ENST00000415395 IQSEC2Q5JU85 1478 aa15.16■□□□□ 0.02
RFFL-205ENST00000415395 ESCO1Q5FWF5 840 aa15.16■□□□□ 0.02
RFFL-205ENST00000415395 RUNDC1Q96C34 613 aa15.16■□□□□ 0.02
RFFL-205ENST00000415395 ZRANB1Q9UGI0 708 aa15.16■□□□□ 0.02
RFFL-205ENST00000415395 MST1RQ04912 1400 aa15.16■□□□□ 0.02
RFFL-205ENST00000415395 MSH6P52701 1360 aa15.15■□□□□ 0.02
RFFL-205ENST00000415395 ATF3P18847 181 aa15.15■□□□□ 0.02
RFFL-205ENST00000415395 CADPS2Q86UW7 1296 aa15.15■□□□□ 0.02
RFFL-205ENST00000415395 PNNQ9H307 717 aaKnown RBP15.15■□□□□ 0.02
RFFL-205ENST00000415395 ANP32AP39687 249 aaKnown RBP15.14■□□□□ 0.01
RFFL-205ENST00000415395 TRPM3Q9HCF6 1732 aaPredicted RBP15.14■□□□□ 0.01
RFFL-205ENST00000415395 KIF24Q5T7B8 1368 aa15.14■□□□□ 0.01
RFFL-205ENST00000415395 ZNF521Q96K83 1311 aa15.14■□□□□ 0.01
RFFL-205ENST00000415395 U2AF1L5P0DN76 240 aaPredicted RBP15.13■□□□□ 0.01
RFFL-205ENST00000415395 U2AF1Q01081 240 aaKnown RBP eCLIP15.13■□□□□ 0.01
RFFL-205ENST00000415395 BCL11AQ9H165 835 aa15.13■□□□□ 0.01
RFFL-205ENST00000415395 NOP58Q9Y2X3 529 aaKnown RBP15.13■□□□□ 0.01
RFFL-205ENST00000415395 PSME1Q06323 249 aa15.12■□□□□ 0.01
RFFL-205ENST00000415395 CCDC146Q8IYE0 955 aa15.12■□□□□ 0.01
RFFL-205ENST00000415395 EMILIN1Q9Y6C2 1016 aa15.12■□□□□ 0.01
RFFL-205ENST00000415395 PEAK1Q9H792 1746 aa15.12■□□□□ 0.01
RFFL-205ENST00000415395 APAF1O14727 1248 aa15.12■□□□□ 0.01
RFFL-205ENST00000415395 PHRF1Q9P1Y6 1649 aaKnown RBP15.1■□□□□ 0.01
RFFL-205ENST00000415395 U2SURPO15042 1029 aaKnown RBP15.1■□□□□ 0.01
RFFL-205ENST00000415395 PPM1GO15355 546 aaPredicted RBP15.1■□□□□ 0.01
RFFL-205ENST00000415395 FCHSD2O94868 740 aa15.1■□□□□ 0.01
RFFL-205ENST00000415395 NLRP6P59044 892 aa15.1■□□□□ 0.01
RFFL-205ENST00000415395 ABTB2Q8N961 1025 aa15.1■□□□□ 0.01
RFFL-205ENST00000415395 ORAI2Q96SN7 254 aa15.1■□□□□ 0.01
RFFL-205ENST00000415395 SBNO1A3KN83 1393 aa15.1■□□□□ 0.01
RFFL-205ENST00000415395 IL13P35225 146 aa15.09■□□□□ 0.01
RFFL-205ENST00000415395 RRS1Q15050 365 aaKnown RBP15.09■□□□□ 0.01
RFFL-205ENST00000415395 CCDC27Q2M243 656 aa15.09■□□□□ 0.01
RFFL-205ENST00000415395 FLT4P35916 1363 aa15.09■□□□□ 0.01
RFFL-205ENST00000415395 ALS2Q96Q42 1657 aa15.09■□□□□ 0.01
RFFL-205ENST00000415395 RGPD1P0DJD0 1748 aa15.09■□□□□ 0.01
RFFL-205ENST00000415395 FBLN1P23142 703 aa15.09■□□□□ 0.01
RFFL-205ENST00000415395 PLEKHF1Q96S99 279 aa15.09■□□□□ 0.01
RFFL-205ENST00000415395 SALL2Q9Y467 1007 aaPredicted RBP15.09■□□□□ 0.01
RFFL-205ENST00000415395 ZNF335Q9H4Z2 1342 aaPredicted RBP15.09■□□□□ 0.01
RFFL-205ENST00000415395 RTL1A6NKG5 1358 aa15.08■□□□□ 0
RFFL-205ENST00000415395 SLIT3O75094 1523 aa15.08■□□□□ 0
RFFL-205ENST00000415395 PAK3O75914 559 aaPredicted RBP15.08■□□□□ 0
RFFL-205ENST00000415395 LTN1O94822 1766 aa15.08■□□□□ 0
RFFL-205ENST00000415395 GOLGA2Q08379 1002 aa15.08■□□□□ 0
RFFL-205ENST00000415395 TCP11L2Q8N4U5 519 aa15.08■□□□□ 0
RFFL-205ENST00000415395 NFAT5O94916 1531 aa15.07■□□□□ 0
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms