RNA–Protein interactions for RNA: ENST00000415030.6

SCN4B-202, Transcript of sodium voltage-gated channel beta subunit 4, humanhuman

TSL 1 (best)

Gene SCN4B, Length 4,480 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN4B-202ENST00000415030 SMC5Q8IY18 1101 aa14.27□□□□□ -0.12
SCN4B-202ENST00000415030 INTS3Q68E01 1043 aaKnown RBP14.27□□□□□ -0.13
SCN4B-202ENST00000415030 REC8O95072 547 aa14.27□□□□□ -0.13
SCN4B-202ENST00000415030 TRIM27P14373 513 aa14.27□□□□□ -0.13
SCN4B-202ENST00000415030 BMP2KLQ5H9B9 411 aa14.26□□□□□ -0.13
SCN4B-202ENST00000415030 CWC22Q9HCG8 908 aaKnown RBP14.26□□□□□ -0.13
SCN4B-202ENST00000415030 VGFO15240 615 aaPredicted RBP14.26□□□□□ -0.13
SCN4B-202ENST00000415030 CHAF1AQ13111 956 aaPredicted RBP14.26□□□□□ -0.13
SCN4B-202ENST00000415030 TMEM57Q8N5G2 664 aa14.26□□□□□ -0.13
SCN4B-202ENST00000415030 SSH1Q8WYL5 1049 aa14.26□□□□□ -0.13
SCN4B-202ENST00000415030 FAM13BQ9NYF5 915 aa14.26□□□□□ -0.13
SCN4B-202ENST00000415030 NSD2O96028 1365 aa14.26□□□□□ -0.13
SCN4B-202ENST00000415030 DMRT2Q9Y5R5 561 aa14.25□□□□□ -0.13
SCN4B-202ENST00000415030 CCDC39Q9UFE4 941 aa14.25□□□□□ -0.13
SCN4B-202ENST00000415030 ALDH1L2Q3SY69 923 aa14.25□□□□□ -0.13
SCN4B-202ENST00000415030 R3HCC1Q9Y3T6 440 aaKnown RBP14.25□□□□□ -0.13
SCN4B-202ENST00000415030 HMMRO75330 724 aa14.25□□□□□ -0.13
SCN4B-202ENST00000415030 TMPOP42166 694 aaKnown RBP14.24□□□□□ -0.13
SCN4B-202ENST00000415030 CAVIN1Q6NZI2 390 aaKnown RBP14.24□□□□□ -0.13
SCN4B-202ENST00000415030 MAST1Q9Y2H9 1570 aa14.24□□□□□ -0.13
SCN4B-202ENST00000415030 PLA2R1Q13018 1463 aa14.24□□□□□ -0.13
SCN4B-202ENST00000415030 IL16Q14005 1332 aa14.24□□□□□ -0.13
SCN4B-202ENST00000415030 RBM25P49756 843 aaKnown RBP14.24□□□□□ -0.13
SCN4B-202ENST00000415030 RAB3GAP1Q15042 981 aa14.24□□□□□ -0.13
SCN4B-202ENST00000415030 KLHL40Q2TBA0 621 aa14.24□□□□□ -0.13
SCN4B-202ENST00000415030 ATP10AO60312 1499 aa14.24□□□□□ -0.13
SCN4B-202ENST00000415030 ZMYND15Q9H091 742 aa14.23□□□□□ -0.13
SCN4B-202ENST00000415030 MBD3O95983 291 aa14.23□□□□□ -0.13
SCN4B-202ENST00000415030 GNAI1P63096 354 aa14.23□□□□□ -0.13
SCN4B-202ENST00000415030 CARD14Q9BXL6 1004 aa14.23□□□□□ -0.13
SCN4B-202ENST00000415030 NUCB1Q02818 461 aa14.23□□□□□ -0.13
SCN4B-202ENST00000415030 TNNQ9UQP3 1299 aa14.22□□□□□ -0.13
SCN4B-202ENST00000415030 NGDNQ8NEJ9 315 aaKnown RBP14.21□□□□□ -0.13
SCN4B-202ENST00000415030 CCDC9Q9Y3X0 531 aaKnown RBP14.21□□□□□ -0.13
SCN4B-202ENST00000415030 ADGRF5Q8IZF2 1346 aa14.21□□□□□ -0.14
SCN4B-202ENST00000415030 ABCA8O94911 1581 aa14.2□□□□□ -0.14
SCN4B-202ENST00000415030 CDC42BPAQ5VT25 1732 aa14.2□□□□□ -0.14
SCN4B-202ENST00000415030 RPGRIP1LQ68CZ1 1315 aa14.2□□□□□ -0.14
SCN4B-202ENST00000415030 HS1BP3Q53T59 392 aa14.19□□□□□ -0.14
SCN4B-202ENST00000415030 SSFA2P28290 1259 aa14.19□□□□□ -0.14
SCN4B-202ENST00000415030 GGNBP2Q9H3C7 697 aa14.19□□□□□ -0.14
SCN4B-202ENST00000415030 CSB-PGBD3P0DP91 1061 aa14.19□□□□□ -0.14
SCN4B-202ENST00000415030 KDM5AP29375 1690 aaKnown RBP14.19□□□□□ -0.14
SCN4B-202ENST00000415030 APBB1O00213 710 aa14.18□□□□□ -0.14
SCN4B-202ENST00000415030 BAG4O95429 457 aaKnown RBP14.18□□□□□ -0.14
SCN4B-202ENST00000415030 MCM5P33992 734 aa14.18□□□□□ -0.14
SCN4B-202ENST00000415030 PLCB2Q00722 1185 aa14.18□□□□□ -0.14
SCN4B-202ENST00000415030 TMEM132EQ6IEE7 984 aa14.18□□□□□ -0.14
SCN4B-202ENST00000415030 PRPF40AO75400 957 aaKnown RBP14.18□□□□□ -0.14
SCN4B-202ENST00000415030 MCM2P49736 904 aa14.18□□□□□ -0.14
SCN4B-202ENST00000415030 SAMD9LQ8IVG5 1584 aa14.17□□□□□ -0.14
SCN4B-202ENST00000415030 ELL2O00472 640 aaPredicted RBP14.17□□□□□ -0.14
SCN4B-202ENST00000415030 PLCH2O75038 1416 aa14.17□□□□□ -0.14
SCN4B-202ENST00000415030 OFD1O75665 1012 aa14.17□□□□□ -0.14
SCN4B-202ENST00000415030 PUS7Q96PZ0 661 aaKnown RBP14.17□□□□□ -0.14
SCN4B-202ENST00000415030 CABP2Q9NPB3 220 aa14.17□□□□□ -0.14
SCN4B-202ENST00000415030 ZBTB40Q9NUA8 1239 aa14.17□□□□□ -0.14
SCN4B-202ENST00000415030 TBC1D9Q6ZT07 1266 aa14.16□□□□□ -0.14
SCN4B-202ENST00000415030 UNC13BO14795 1591 aa14.16□□□□□ -0.14
SCN4B-202ENST00000415030 TERF1P54274 439 aa14.16□□□□□ -0.14
SCN4B-202ENST00000415030 FCHSD2O94868 740 aa14.16□□□□□ -0.14
SCN4B-202ENST00000415030 SBNO2Q9Y2G9 1366 aa14.16□□□□□ -0.14
SCN4B-202ENST00000415030 TTC37Q6PGP7 1564 aa14.15□□□□□ -0.14
SCN4B-202ENST00000415030 IQGAP3Q86VI3 1631 aa14.15□□□□□ -0.14
SCN4B-202ENST00000415030 UQCRHLA0A096LP55 91 aa14.15□□□□□ -0.14
SCN4B-202ENST00000415030 UQCRHP07919 91 aa14.15□□□□□ -0.14
SCN4B-202ENST00000415030 RBM10P98175 930 aaKnown RBP14.15□□□□□ -0.14
SCN4B-202ENST00000415030 GOLGA6L6A8MZA4 724 aa14.14□□□□□ -0.15
SCN4B-202ENST00000415030 HMGN5P82970 282 aaKnown RBP14.14□□□□□ -0.15
SCN4B-202ENST00000415030 C1orf115Q9H7X2 142 aa14.14□□□□□ -0.15
SCN4B-202ENST00000415030 ARID3AQ99856 593 aa14.14□□□□□ -0.15
SCN4B-202ENST00000415030 ARHGAP45Q92619 1136 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 PRKAR2BP31323 418 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 FOXD4L5Q5VV16 416 aaPredicted RBP14.13□□□□□ -0.15
SCN4B-202ENST00000415030 FOXD4L4Q8WXT5 416 aaPredicted RBP14.13□□□□□ -0.15
SCN4B-202ENST00000415030 C14orf93Q9H972 538 aaKnown RBP14.13□□□□□ -0.15
SCN4B-202ENST00000415030 PLXNC1O60486 1568 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 TSPY26PQ9H489 355 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 RTEL1-TNFRSF6BF6WH68 1400 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 ATAD2Q6PL18 1390 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 ANKRD36BQ8N2N9 1353 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 PREX2Q70Z35 1606 aa14.13□□□□□ -0.15
SCN4B-202ENST00000415030 ATP6V1DQ9Y5K8 247 aa14.12□□□□□ -0.15
SCN4B-202ENST00000415030 TWISTNBQ3B726 338 aaPredicted RBP14.12□□□□□ -0.15
SCN4B-202ENST00000415030 PPP1R9BQ96SB3 815 aa14.12□□□□□ -0.15
SCN4B-202ENST00000415030 NPHP1O15259 732 aa14.12□□□□□ -0.15
SCN4B-202ENST00000415030 SASS6Q6UVJ0 657 aa14.11□□□□□ -0.15
SCN4B-202ENST00000415030 PTPRTO14522 1441 aa14.11□□□□□ -0.15
SCN4B-202ENST00000415030 NOS1P29475 1434 aa14.11□□□□□ -0.15
SCN4B-202ENST00000415030 ERVK-7P63135 1459 aa14.11□□□□□ -0.15
SCN4B-202ENST00000415030 ZSCAN23Q3MJ62 389 aa14.11□□□□□ -0.15
SCN4B-202ENST00000415030 TRPM2O94759 1503 aa14.1□□□□□ -0.15
SCN4B-202ENST00000415030 DYNC1I1O14576 645 aa14.1□□□□□ -0.15
SCN4B-202ENST00000415030 ERC2O15083 957 aa14.1□□□□□ -0.15
SCN4B-202ENST00000415030 MINK1Q8N4C8 1332 aaPredicted RBP14.1□□□□□ -0.15
SCN4B-202ENST00000415030 RPAP2Q8IXW5 612 aaPredicted RBP14.1□□□□□ -0.15
SCN4B-202ENST00000415030 RNF214Q8ND24 703 aa14.1□□□□□ -0.15
SCN4B-202ENST00000415030 TRIM6-TRIM34B2RNG4 842 aa14.1□□□□□ -0.15
SCN4B-202ENST00000415030 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.1□□□□□ -0.15
SCN4B-202ENST00000415030 LETM1O95202 739 aaPredicted RBP14.09□□□□□ -0.15
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms