RNA–Protein interactions for RNA: ENST00000414044.1

VTA1P1-201, Transcript of vesicle trafficking 1 pseudogene 1, humanhuman

BASIC

Gene VTA1P1, Length 866 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1P1-201ENST00000414044 PODXL2Q9NZ53 605 aa8.81□□□□□ -1
VTA1P1-201ENST00000414044 AXIN1O15169 862 aa8.8□□□□□ -1
VTA1P1-201ENST00000414044 RC3H1Q5TC82 1133 aaKnown RBP8.8□□□□□ -1
VTA1P1-201ENST00000414044 ST8SIA5O15466 376 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 TRAK2O60296 914 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 SMPD1P17405 629 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 SKOR1P84550 965 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 KCNH2Q12809 1159 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 EHBP1Q8NDI1 1231 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 UNC93B1Q9H1C4 597 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 EVA1BQ9NVM1 165 aa8.79□□□□□ -1
VTA1P1-201ENST00000414044 HRCP23327 699 aa8.78□□□□□ -1
VTA1P1-201ENST00000414044 TUSC1Q2TAM9 212 aa8.78□□□□□ -1
VTA1P1-201ENST00000414044 MYSM1Q5VVJ2 828 aa8.78□□□□□ -1
VTA1P1-201ENST00000414044 NUTM2BA6NNL0 878 aaPredicted RBP8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 NUTM2EB1AL46 878 aaPredicted RBP8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 CTHP32929 405 aa8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 CSPP1Q1MSJ5 1256 aa8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 NUTM2DQ5VT03 806 aaPredicted RBP8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 PTCRAQ6ISU1 281 aaPredicted RBP8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 NUTM2AQ8IVF1 878 aaPredicted RBP8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 ZNF775Q96BV0 537 aaPredicted RBP8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 PCDHB15Q9Y5E8 787 aa8.77□□□□□ -1.01
VTA1P1-201ENST00000414044 POTECB2RU33 542 aa8.76□□□□□ -1.01
VTA1P1-201ENST00000414044 CLK2P49760 499 aaKnown RBP8.76□□□□□ -1.01
VTA1P1-201ENST00000414044 LYPD8Q6UX82 237 aa8.76□□□□□ -1.01
VTA1P1-201ENST00000414044 CCDC82Q8N4S0 544 aa8.76□□□□□ -1.01
VTA1P1-201ENST00000414044 CFAP99D6REC4 459 aa8.75□□□□□ -1.01
VTA1P1-201ENST00000414044 PROSER2Q86WR7 435 aaPredicted RBP8.75□□□□□ -1.01
VTA1P1-201ENST00000414044 PROCA1Q8NCQ7 364 aaPredicted RBP8.75□□□□□ -1.01
VTA1P1-201ENST00000414044 HELBQ8NG08 1087 aaPredicted RBP8.75□□□□□ -1.01
VTA1P1-201ENST00000414044 POLR3EQ9NVU0 708 aa8.75□□□□□ -1.01
VTA1P1-201ENST00000414044 ATP1B4Q9UN42 357 aaPredicted RBP8.75□□□□□ -1.01
VTA1P1-201ENST00000414044 J3QL48 77 aa8.74□□□□□ -1.01
VTA1P1-201ENST00000414044 CABLES1Q8TDN4 633 aa8.74□□□□□ -1.01
VTA1P1-201ENST00000414044 TSC1Q92574 1164 aa8.74□□□□□ -1.01
VTA1P1-201ENST00000414044 GNL3Q9BVP2 549 aaKnown RBP eCLIP8.74□□□□□ -1.01
VTA1P1-201ENST00000414044 SIAH2O43255 324 aa8.73□□□□□ -1.01
VTA1P1-201ENST00000414044 ALDH1A1P00352 501 aa8.73□□□□□ -1.01
VTA1P1-201ENST00000414044 SH3BP2P78314 561 aa8.73□□□□□ -1.01
VTA1P1-201ENST00000414044 TRIM26Q12899 539 aaPredicted RBP8.73□□□□□ -1.01
VTA1P1-201ENST00000414044 LIMD1Q9UGP4 676 aa8.73□□□□□ -1.01
VTA1P1-201ENST00000414044 WASF2Q9Y6W5 498 aa8.73□□□□□ -1.01
VTA1P1-201ENST00000414044 RAD21O60216 631 aa8.72□□□□□ -1.01
VTA1P1-201ENST00000414044 LINC01559Q495D7 138 aa8.72□□□□□ -1.01
VTA1P1-201ENST00000414044 ZNF511Q8NB15 262 aa8.72□□□□□ -1.01
VTA1P1-201ENST00000414044 DACH1Q9UI36 760 aa8.72□□□□□ -1.01
VTA1P1-201ENST00000414044 LILRB3O75022 631 aa8.71□□□□□ -1.02
VTA1P1-201ENST00000414044 VARSP26640 1264 aaKnown RBP8.71□□□□□ -1.02
VTA1P1-201ENST00000414044 MPNDQ8N594 471 aa8.71□□□□□ -1.02
VTA1P1-201ENST00000414044 ARMC2Q8NEN0 867 aa8.71□□□□□ -1.02
VTA1P1-201ENST00000414044 BAP1Q92560 729 aa8.71□□□□□ -1.02
VTA1P1-201ENST00000414044 QPCTQ16769 361 aa8.7□□□□□ -1.02
VTA1P1-201ENST00000414044 HPS1Q92902 700 aa8.7□□□□□ -1.02
VTA1P1-201ENST00000414044 POM121Q96HA1 1249 aa8.7□□□□□ -1.02
VTA1P1-201ENST00000414044 F12P00748 615 aaPredicted RBP8.69□□□□□ -1.02
VTA1P1-201ENST00000414044 FNBP4Q8N3X1 1017 aaPredicted RBP8.69□□□□□ -1.02
VTA1P1-201ENST00000414044 SENP2Q9HC62 589 aa8.69□□□□□ -1.02
VTA1P1-201ENST00000414044 ATP13A2Q9NQ11 1180 aa8.69□□□□□ -1.02
VTA1P1-201ENST00000414044 GMPR2Q9P2T1 348 aaKnown RBP8.69□□□□□ -1.02
VTA1P1-201ENST00000414044 C11orf95C9JLR9 678 aaPredicted RBP8.68□□□□□ -1.02
VTA1P1-201ENST00000414044 BANK1Q8NDB2 785 aa8.68□□□□□ -1.02
VTA1P1-201ENST00000414044 FAM174AQ8TBP5 190 aa8.68□□□□□ -1.02
VTA1P1-201ENST00000414044 MAP10Q9P2G4 905 aa8.68□□□□□ -1.02
VTA1P1-201ENST00000414044 RFC5P40937 340 aa8.67□□□□□ -1.02
VTA1P1-201ENST00000414044 AGERQ15109 404 aa8.67□□□□□ -1.02
VTA1P1-201ENST00000414044 NBPF14Q5TI25 921 aa8.67□□□□□ -1.02
VTA1P1-201ENST00000414044 ZNF777Q9ULD5 760 aaPredicted RBP8.67□□□□□ -1.02
VTA1P1-201ENST00000414044 BPHLQ86WA6 291 aaPredicted RBP8.66□□□□□ -1.02
VTA1P1-201ENST00000414044 KIFC2Q96AC6 838 aa8.66□□□□□ -1.02
VTA1P1-201ENST00000414044 COG6Q9Y2V7 657 aa8.66□□□□□ -1.02
VTA1P1-201ENST00000414044 PDIA4P13667 645 aaKnown RBP8.65□□□□□ -1.02
VTA1P1-201ENST00000414044 PPP2R2DQ66LE6 453 aa8.65□□□□□ -1.02
VTA1P1-201ENST00000414044 TREML4Q6UXN2 200 aa8.65□□□□□ -1.02
VTA1P1-201ENST00000414044 TRIM47Q96LD4 638 aa8.65□□□□□ -1.02
VTA1P1-201ENST00000414044 TLL2Q9Y6L7 1015 aa8.65□□□□□ -1.02
VTA1P1-201ENST00000414044 PER1O15534 1290 aaPredicted RBP8.64□□□□□ -1.03
VTA1P1-201ENST00000414044 TMEM259Q4ZIN3 620 aa8.64□□□□□ -1.03
VTA1P1-201ENST00000414044 RTL5Q5HYW3 569 aaPredicted RBP8.64□□□□□ -1.03
VTA1P1-201ENST00000414044 CCDC97Q96F63 343 aaPredicted RBP8.64□□□□□ -1.03
VTA1P1-201ENST00000414044 SNRKQ9NRH2 765 aa8.64□□□□□ -1.03
VTA1P1-201ENST00000414044 LCE2AQ5TA79 106 aaPredicted RBP8.63□□□□□ -1.03
VTA1P1-201ENST00000414044 GPKOWQ92917 476 aaPredicted RBP eCLIP8.63□□□□□ -1.03
VTA1P1-201ENST00000414044 SERPINA10Q9UK55 444 aa8.63□□□□□ -1.03
VTA1P1-201ENST00000414044 CAPN5O15484 640 aaPredicted RBP8.62□□□□□ -1.03
VTA1P1-201ENST00000414044 FBXO31Q5XUX0 539 aaPredicted RBP8.62□□□□□ -1.03
VTA1P1-201ENST00000414044 ADH1CP00326 375 aa8.61□□□□□ -1.03
VTA1P1-201ENST00000414044 NNTQ13423 1086 aa8.61□□□□□ -1.03
VTA1P1-201ENST00000414044 FOXJ1Q92949 421 aa8.61□□□□□ -1.03
VTA1P1-201ENST00000414044 PNMA1Q8ND90 353 aa8.6□□□□□ -1.03
VTA1P1-201ENST00000414044 CDK15Q96Q40 435 aa8.6□□□□□ -1.03
VTA1P1-201ENST00000414044 ARID5BQ14865 1188 aa8.59□□□□□ -1.03
VTA1P1-201ENST00000414044 ZNF330Q9Y3S2 320 aaPredicted RBP8.59□□□□□ -1.03
VTA1P1-201ENST00000414044 SOCS7O14512 581 aa8.58□□□□□ -1.04
VTA1P1-201ENST00000414044 SNRPBP14678 240 aaKnown RBP8.58□□□□□ -1.04
VTA1P1-201ENST00000414044 NR5A1Q13285 461 aa8.58□□□□□ -1.04
VTA1P1-201ENST00000414044 MTMR14Q8NCE2 650 aa8.58□□□□□ -1.04
VTA1P1-201ENST00000414044 ZC3H4Q9UPT8 1303 aaKnown RBP8.57□□□□□ -1.04
VTA1P1-201ENST00000414044 ZBTB7CA1YPR0 619 aa8.57□□□□□ -1.04
VTA1P1-201ENST00000414044 WFS1O76024 890 aa8.57□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms