RNA–Protein interactions for RNA: ENST00000413509.6

HDAC9-207, Transcript of histone deacetylase 9, humanhuman

TSL 5

Gene HDAC9, Length 550 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-207ENST00000413509 ZBED9Q6R2W3 1325 aa11.1□□□□□ -0.63
HDAC9-207ENST00000413509 AATKQ6ZMQ8 1374 aa11.1□□□□□ -0.63
HDAC9-207ENST00000413509 PNPLA6Q8IY17 1366 aa11.1□□□□□ -0.63
HDAC9-207ENST00000413509 TTC21BQ7Z4L5 1316 aa11.09□□□□□ -0.63
HDAC9-207ENST00000413509 MARF1Q9Y4F3 1742 aaKnown RBP11.09□□□□□ -0.63
HDAC9-207ENST00000413509 PIK3C2AO00443 1686 aa11.09□□□□□ -0.63
HDAC9-207ENST00000413509 KIF1AQ12756 1690 aa11.09□□□□□ -0.63
HDAC9-207ENST00000413509 USP31Q70CQ4 1352 aa11.09□□□□□ -0.63
HDAC9-207ENST00000413509 GGNBP2Q9H3C7 697 aa11.09□□□□□ -0.63
HDAC9-207ENST00000413509 TTC21AQ8NDW8 1320 aa11.09□□□□□ -0.63
HDAC9-207ENST00000413509 TMEM94Q12767 1356 aa11.08□□□□□ -0.64
HDAC9-207ENST00000413509 HNRNPUQ00839 825 aaKnown RBP eCLIP11.08□□□□□ -0.64
HDAC9-207ENST00000413509 C1orf167Q5SNV9 1468 aa11.07□□□□□ -0.64
HDAC9-207ENST00000413509 PROSER2Q86WR7 435 aaPredicted RBP11.07□□□□□ -0.64
HDAC9-207ENST00000413509 NME9Q86XW9 330 aa11.07□□□□□ -0.64
HDAC9-207ENST00000413509 C19orf44Q9H6X5 657 aa11.07□□□□□ -0.64
HDAC9-207ENST00000413509 MST1RQ04912 1400 aa11.07□□□□□ -0.64
HDAC9-207ENST00000413509 CDK12Q9NYV4 1490 aaPredicted RBP11.06□□□□□ -0.64
HDAC9-207ENST00000413509 MTHFSP49914 203 aa11.06□□□□□ -0.64
HDAC9-207ENST00000413509 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.06□□□□□ -0.64
HDAC9-207ENST00000413509 MAP2P11137 1827 aaKnown RBP11.06□□□□□ -0.64
HDAC9-207ENST00000413509 TRPM3Q9HCF6 1732 aaPredicted RBP11.06□□□□□ -0.64
HDAC9-207ENST00000413509 NUTM2FA1L443 756 aa11.05□□□□□ -0.64
HDAC9-207ENST00000413509 ADAMTS8Q9UP79 889 aa11.05□□□□□ -0.64
HDAC9-207ENST00000413509 PHF8Q9UPP1 1060 aa11.05□□□□□ -0.64
HDAC9-207ENST00000413509 PMFBP1Q8TBY8 1022 aa11.04□□□□□ -0.64
HDAC9-207ENST00000413509 FBXO41Q8TF61 875 aa11.04□□□□□ -0.64
HDAC9-207ENST00000413509 RBM33Q96EV2 1170 aaKnown RBP11.04□□□□□ -0.64
HDAC9-207ENST00000413509 TNNT2P45379 298 aaPredicted RBP11.03□□□□□ -0.64
HDAC9-207ENST00000413509 WDR43Q15061 677 aaKnown RBP eCLIP11.03□□□□□ -0.64
HDAC9-207ENST00000413509 NGDNQ8NEJ9 315 aaKnown RBP11.03□□□□□ -0.64
HDAC9-207ENST00000413509 COG3Q96JB2 828 aa11.03□□□□□ -0.64
HDAC9-207ENST00000413509 CFAP53Q96M91 514 aa11.03□□□□□ -0.64
HDAC9-207ENST00000413509 POLKQ9UBT6 870 aa11.03□□□□□ -0.64
HDAC9-207ENST00000413509 ZRANB1Q9UGI0 708 aa11.03□□□□□ -0.64
HDAC9-207ENST00000413509 IQSEC2Q5JU85 1478 aa11.02□□□□□ -0.65
HDAC9-207ENST00000413509 PEAK1Q9H792 1746 aa11.02□□□□□ -0.65
HDAC9-207ENST00000413509 DMRT2Q9Y5R5 561 aa11.02□□□□□ -0.65
HDAC9-207ENST00000413509 ALS2Q96Q42 1657 aa11.01□□□□□ -0.65
HDAC9-207ENST00000413509 C14orf37Q86TY3 774 aa11.01□□□□□ -0.65
HDAC9-207ENST00000413509 ZNF335Q9H4Z2 1342 aaPredicted RBP11.01□□□□□ -0.65
HDAC9-207ENST00000413509 PHRF1Q9P1Y6 1649 aaKnown RBP11.01□□□□□ -0.65
HDAC9-207ENST00000413509 MSH6P52701 1360 aa11.01□□□□□ -0.65
HDAC9-207ENST00000413509 NFAT5O94916 1531 aa11□□□□□ -0.65
HDAC9-207ENST00000413509 NCBP3Q53F19 620 aaKnown RBP11□□□□□ -0.65
HDAC9-207ENST00000413509 CADPS2Q86UW7 1296 aa11□□□□□ -0.65
HDAC9-207ENST00000413509 ZNF521Q96K83 1311 aa11□□□□□ -0.65
HDAC9-207ENST00000413509 RGPD1P0DJD0 1748 aa11□□□□□ -0.65
HDAC9-207ENST00000413509 SLIT3O75094 1523 aa10.99□□□□□ -0.65
HDAC9-207ENST00000413509 ATF3P18847 181 aa10.99□□□□□ -0.65
HDAC9-207ENST00000413509 ESCO1Q5FWF5 840 aa10.99□□□□□ -0.65
HDAC9-207ENST00000413509 NGEFQ8N5V2 710 aa10.99□□□□□ -0.65
HDAC9-207ENST00000413509 ORAI2Q96SN7 254 aa10.99□□□□□ -0.65
HDAC9-207ENST00000413509 KIF24Q5T7B8 1368 aa10.99□□□□□ -0.65
HDAC9-207ENST00000413509 LTBP4Q8N2S1 1624 aa10.98□□□□□ -0.65
HDAC9-207ENST00000413509 PXDNQ92626 1479 aa10.98□□□□□ -0.65
HDAC9-207ENST00000413509 PDE3BQ13370 1112 aa10.97□□□□□ -0.65
HDAC9-207ENST00000413509 EMILIN1Q9Y6C2 1016 aa10.97□□□□□ -0.65
HDAC9-207ENST00000413509 USP19O94966 1318 aa10.97□□□□□ -0.65
HDAC9-207ENST00000413509 SBNO1A3KN83 1393 aa10.97□□□□□ -0.65
HDAC9-207ENST00000413509 MED1Q15648 1581 aaPredicted RBP10.96□□□□□ -0.65
HDAC9-207ENST00000413509 RTL1A6NKG5 1358 aa10.96□□□□□ -0.65
HDAC9-207ENST00000413509 DIAPH1O60610 1272 aaKnown RBP10.96□□□□□ -0.65
HDAC9-207ENST00000413509 FBLN1P23142 703 aa10.96□□□□□ -0.65
HDAC9-207ENST00000413509 IL13P35225 146 aa10.96□□□□□ -0.65
HDAC9-207ENST00000413509 CRYBG1Q9Y4K1 1723 aa10.95□□□□□ -0.66
HDAC9-207ENST00000413509 RUNDC1Q96C34 613 aa10.95□□□□□ -0.66
HDAC9-207ENST00000413509 PLEKHF1Q96S99 279 aa10.95□□□□□ -0.66
HDAC9-207ENST00000413509 NUDCQ9Y266 331 aa10.95□□□□□ -0.66
HDAC9-207ENST00000413509 LTN1O94822 1766 aa10.95□□□□□ -0.66
HDAC9-207ENST00000413509 NHSL1Q5SYE7 1610 aa10.95□□□□□ -0.66
HDAC9-207ENST00000413509 FLT4P35916 1363 aa10.94□□□□□ -0.66
HDAC9-207ENST00000413509 MAP3K19Q56UN5 1328 aa10.94□□□□□ -0.66
HDAC9-207ENST00000413509 FOXO3O43524 673 aa10.94□□□□□ -0.66
HDAC9-207ENST00000413509 NLRP6P59044 892 aa10.94□□□□□ -0.66
HDAC9-207ENST00000413509 PSME1Q06323 249 aa10.94□□□□□ -0.66
HDAC9-207ENST00000413509 RRS1Q15050 365 aaKnown RBP10.94□□□□□ -0.66
HDAC9-207ENST00000413509 NPHP3Q7Z494 1330 aa10.93□□□□□ -0.66
HDAC9-207ENST00000413509 U2AF1L5P0DN76 240 aaPredicted RBP10.93□□□□□ -0.66
HDAC9-207ENST00000413509 U2AF1Q01081 240 aaKnown RBP eCLIP10.93□□□□□ -0.66
HDAC9-207ENST00000413509 CCDC27Q2M243 656 aa10.93□□□□□ -0.66
HDAC9-207ENST00000413509 KRT28Q7Z3Y7 464 aa10.93□□□□□ -0.66
HDAC9-207ENST00000413509 CCDC146Q8IYE0 955 aa10.93□□□□□ -0.66
HDAC9-207ENST00000413509 ABTB2Q8N961 1025 aa10.93□□□□□ -0.66
HDAC9-207ENST00000413509 TNS3Q68CZ2 1445 aa10.92□□□□□ -0.66
HDAC9-207ENST00000413509 APAF1O14727 1248 aa10.92□□□□□ -0.66
HDAC9-207ENST00000413509 FCHSD2O94868 740 aa10.92□□□□□ -0.66
HDAC9-207ENST00000413509 BRINP3Q76B58 766 aa10.92□□□□□ -0.66
HDAC9-207ENST00000413509 RSPH6AQ9H0K4 717 aa10.92□□□□□ -0.66
HDAC9-207ENST00000413509 ABCC6O95255 1503 aa10.92□□□□□ -0.66
HDAC9-207ENST00000413509 ARHGEF10O15013 1369 aa10.91□□□□□ -0.66
HDAC9-207ENST00000413509 EIF4A2Q14240 407 aaKnown RBP10.91□□□□□ -0.66
HDAC9-207ENST00000413509 TRMT2AQ8IZ69 625 aaKnown RBP10.91□□□□□ -0.66
HDAC9-207ENST00000413509 SLAIN2Q9P270 581 aa10.91□□□□□ -0.66
HDAC9-207ENST00000413509 KDRP35968 1356 aa10.9□□□□□ -0.66
HDAC9-207ENST00000413509 SOS2Q07890 1332 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-207ENST00000413509 RNF123Q5XPI4 1314 aa10.9□□□□□ -0.66
HDAC9-207ENST00000413509 CAMTA1Q9Y6Y1 1673 aa10.9□□□□□ -0.66
HDAC9-207ENST00000413509 PAK3O75914 559 aaPredicted RBP10.9□□□□□ -0.66
HDAC9-207ENST00000413509 TCP11L2Q8N4U5 519 aa10.9□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms