RNA–Protein interactions for RNA: ENST00000413437.1

CSTF2-202, Transcript of cleavage stimulation factor subunit 2, humanhuman

TSL 5

Gene CSTF2, Length 757 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2-202ENST00000413437 ZRANB1Q9UGI0 708 aa10.82□□□□□ -0.68
CSTF2-202ENST00000413437 CPSF1Q10570 1443 aaKnown RBP10.82□□□□□ -0.68
CSTF2-202ENST00000413437 AKAP12Q02952 1782 aa10.81□□□□□ -0.68
CSTF2-202ENST00000413437 POLR3GLQ9BT43 218 aa10.81□□□□□ -0.68
CSTF2-202ENST00000413437 USP6P35125 1406 aa10.81□□□□□ -0.68
CSTF2-202ENST00000413437 SSH2Q76I76 1423 aa10.81□□□□□ -0.68
CSTF2-202ENST00000413437 MEX3CQ5U5Q3 659 aaKnown RBP10.8□□□□□ -0.68
CSTF2-202ENST00000413437 PUS7Q96PZ0 661 aaKnown RBP10.8□□□□□ -0.68
CSTF2-202ENST00000413437 TTC21BQ7Z4L5 1316 aa10.8□□□□□ -0.68
CSTF2-202ENST00000413437 A0A1W2PP64 1363 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 KTN1Q86UP2 1357 aaKnown RBP10.79□□□□□ -0.68
CSTF2-202ENST00000413437 ABCA3Q99758 1704 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 CRYBG1Q9Y4K1 1723 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 POTEAQ6S8J7 498 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 ILDR2Q71H61 639 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 SUGP2Q8IX01 1082 aaKnown RBP eCLIP10.79□□□□□ -0.68
CSTF2-202ENST00000413437 ABTB2Q8N961 1025 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 C8orf37Q96NL8 207 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 MYOM1P52179 1685 aa10.79□□□□□ -0.68
CSTF2-202ENST00000413437 NME9Q86XW9 330 aa10.78□□□□□ -0.68
CSTF2-202ENST00000413437 MON2Q7Z3U7 1717 aa10.78□□□□□ -0.68
CSTF2-202ENST00000413437 ARHGEF10O15013 1369 aa10.77□□□□□ -0.68
CSTF2-202ENST00000413437 NRKQ7Z2Y5 1582 aa10.77□□□□□ -0.68
CSTF2-202ENST00000413437 PIK3C2AO00443 1686 aa10.77□□□□□ -0.69
CSTF2-202ENST00000413437 ZNF692Q9BU19 519 aaPredicted RBP10.77□□□□□ -0.69
CSTF2-202ENST00000413437 CARD14Q9BXL6 1004 aa10.77□□□□□ -0.69
CSTF2-202ENST00000413437 AFF2P51816 1311 aa10.77□□□□□ -0.69
CSTF2-202ENST00000413437 MARF1Q9Y4F3 1742 aaKnown RBP10.76□□□□□ -0.69
CSTF2-202ENST00000413437 FAM83GA6ND36 823 aa10.76□□□□□ -0.69
CSTF2-202ENST00000413437 NLRP6P59044 892 aa10.76□□□□□ -0.69
CSTF2-202ENST00000413437 HDGFL2Q7Z4V5 671 aaPredicted RBP10.76□□□□□ -0.69
CSTF2-202ENST00000413437 NGLY1Q96IV0 654 aa10.76□□□□□ -0.69
CSTF2-202ENST00000413437 SLC24A1O60721 1099 aa10.75□□□□□ -0.69
CSTF2-202ENST00000413437 HAP1P54257 671 aaPredicted RBP10.75□□□□□ -0.69
CSTF2-202ENST00000413437 ZC3H6P61129 1189 aaKnown RBP10.75□□□□□ -0.69
CSTF2-202ENST00000413437 CHRNA2Q15822 529 aa10.75□□□□□ -0.69
CSTF2-202ENST00000413437 TERF2IPQ9NYB0 399 aa10.75□□□□□ -0.69
CSTF2-202ENST00000413437 PHRF1Q9P1Y6 1649 aaKnown RBP10.75□□□□□ -0.69
CSTF2-202ENST00000413437 KIF7Q2M1P5 1343 aa10.75□□□□□ -0.69
CSTF2-202ENST00000413437 SOX12O15370 315 aa10.74□□□□□ -0.69
CSTF2-202ENST00000413437 FBLN1P23142 703 aa10.74□□□□□ -0.69
CSTF2-202ENST00000413437 USP19O94966 1318 aa10.74□□□□□ -0.69
CSTF2-202ENST00000413437 ANKRD36BQ8N2N9 1353 aa10.74□□□□□ -0.69
CSTF2-202ENST00000413437 GCP02774 474 aa10.73□□□□□ -0.69
CSTF2-202ENST00000413437 CDCA8Q53HL2 280 aa10.73□□□□□ -0.69
CSTF2-202ENST00000413437 NLRP13Q86W25 1043 aa10.73□□□□□ -0.69
CSTF2-202ENST00000413437 FNBP4Q8N3X1 1017 aaPredicted RBP10.73□□□□□ -0.69
CSTF2-202ENST00000413437 TTC21AQ8NDW8 1320 aa10.73□□□□□ -0.69
CSTF2-202ENST00000413437 EDC4Q6P2E9 1401 aaKnown RBP10.73□□□□□ -0.69
CSTF2-202ENST00000413437 BCL9LQ86UU0 1499 aa10.73□□□□□ -0.69
CSTF2-202ENST00000413437 ZBTB7CA1YPR0 619 aa10.72□□□□□ -0.69
CSTF2-202ENST00000413437 GGNBP2Q9H3C7 697 aa10.72□□□□□ -0.69
CSTF2-202ENST00000413437 QTRT2Q9H974 415 aaKnown RBP10.72□□□□□ -0.69
CSTF2-202ENST00000413437 PANK3Q9H999 370 aa10.72□□□□□ -0.69
CSTF2-202ENST00000413437 USP21Q9UK80 565 aa10.72□□□□□ -0.69
CSTF2-202ENST00000413437 WASHC2AQ641Q2 1341 aa10.72□□□□□ -0.69
CSTF2-202ENST00000413437 BRD4O60885 1362 aaPredicted RBP10.72□□□□□ -0.69
CSTF2-202ENST00000413437 KIAA0232Q92628 1395 aa10.72□□□□□ -0.69
CSTF2-202ENST00000413437 NINLQ9Y2I6 1382 aa10.72□□□□□ -0.69
CSTF2-202ENST00000413437 FYB1O15117 783 aa10.71□□□□□ -0.69
CSTF2-202ENST00000413437 SLIT3O75094 1523 aa10.71□□□□□ -0.69
CSTF2-202ENST00000413437 PLCH1Q4KWH8 1693 aa10.71□□□□□ -0.69
CSTF2-202ENST00000413437 NSD3Q9BZ95 1437 aa10.71□□□□□ -0.69
CSTF2-202ENST00000413437 SLIT2O94813 1529 aa10.7□□□□□ -0.7
CSTF2-202ENST00000413437 USP31Q70CQ4 1352 aa10.7□□□□□ -0.7
CSTF2-202ENST00000413437 CCDC7Q96M83 1385 aa10.7□□□□□ -0.7
CSTF2-202ENST00000413437 PRDM11Q9NQV5 511 aa10.7□□□□□ -0.7
CSTF2-202ENST00000413437 BTG4Q9NY30 223 aa10.7□□□□□ -0.7
CSTF2-202ENST00000413437 ZNF772Q68DY9 489 aaPredicted RBP10.69□□□□□ -0.7
CSTF2-202ENST00000413437 NFAT5O94916 1531 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 OVOS2A0A0J9YW53 1432 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 OVOS2Q6IE36 1432 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 COL14A1Q05707 1796 aaKnown RBP10.68□□□□□ -0.7
CSTF2-202ENST00000413437 NRAPQ86VF7 1730 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 ARHGEF25Q86VW2 580 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 UNC5CLQ8IV45 518 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 AXIN2Q9Y2T1 843 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 USP54Q70EL1 1684 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 CAMTA1Q9Y6Y1 1673 aa10.68□□□□□ -0.7
CSTF2-202ENST00000413437 ATRNO75882 1429 aa10.67□□□□□ -0.7
CSTF2-202ENST00000413437 COL18A1P39060 1754 aa10.67□□□□□ -0.7
CSTF2-202ENST00000413437 STRN4Q9NRL3 753 aa10.67□□□□□ -0.7
CSTF2-202ENST00000413437 LMO7Q8WWI1 1683 aa10.66□□□□□ -0.7
CSTF2-202ENST00000413437 CPDO75976 1380 aa10.66□□□□□ -0.7
CSTF2-202ENST00000413437 KIF20BQ96Q89 1820 aa10.66□□□□□ -0.7
CSTF2-202ENST00000413437 COG3Q96JB2 828 aa10.66□□□□□ -0.7
CSTF2-202ENST00000413437 RGPD5Q99666 1765 aa10.66□□□□□ -0.7
CSTF2-202ENST00000413437 GLI3P10071 1580 aa10.65□□□□□ -0.7
CSTF2-202ENST00000413437 NWD2Q9ULI1 1742 aa10.65□□□□□ -0.7
CSTF2-202ENST00000413437 PER1O15534 1290 aaPredicted RBP10.65□□□□□ -0.7
CSTF2-202ENST00000413437 RXRBP28702 533 aa10.65□□□□□ -0.7
CSTF2-202ENST00000413437 ZEB1P37275 1124 aaPredicted RBP10.65□□□□□ -0.7
CSTF2-202ENST00000413437 CNGB1Q14028 1251 aaPredicted RBP10.65□□□□□ -0.7
CSTF2-202ENST00000413437 RRS1Q15050 365 aaKnown RBP10.65□□□□□ -0.7
CSTF2-202ENST00000413437 LARP1Q6PKG0 1096 aaKnown RBP10.65□□□□□ -0.7
CSTF2-202ENST00000413437 TRPC5Q9UL62 973 aaPredicted RBP10.65□□□□□ -0.7
CSTF2-202ENST00000413437 TNKS1BP1Q9C0C2 1729 aaKnown RBP10.64□□□□□ -0.71
CSTF2-202ENST00000413437 RBM6P78332 1123 aaKnown RBP10.64□□□□□ -0.71
CSTF2-202ENST00000413437 VPS72Q15906 364 aa10.64□□□□□ -0.71
CSTF2-202ENST00000413437 KCNH5Q8NCM2 988 aa10.64□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 11.6 ms