RNA–Protein interactions for RNA: ENST00000413288.1

FAM238B-201, Transcript of family with sequence similarity 238 member B, humanhuman

TSL 3

Gene FAM238B, Length 413 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM238B-201ENST00000413288 EDC4Q6P2E9 1401 aaKnown RBP13.36□□□□□ -0.27
FAM238B-201ENST00000413288 PMFBP1Q8TBY8 1022 aa13.35□□□□□ -0.27
FAM238B-201ENST00000413288 ACEP12821 1306 aa13.35□□□□□ -0.27
FAM238B-201ENST00000413288 ADGRL3Q9HAR2 1447 aa13.34□□□□□ -0.27
FAM238B-201ENST00000413288 WDR43Q15061 677 aaKnown RBP eCLIP13.34□□□□□ -0.27
FAM238B-201ENST00000413288 C14orf37Q86TY3 774 aa13.34□□□□□ -0.27
FAM238B-201ENST00000413288 XIRP1Q702N8 1843 aaKnown RBP13.34□□□□□ -0.27
FAM238B-201ENST00000413288 ANKARQ7Z5J8 1434 aa13.33□□□□□ -0.28
FAM238B-201ENST00000413288 PLEKHG3A1L390 1219 aa13.33□□□□□ -0.28
FAM238B-201ENST00000413288 PROSER2Q86WR7 435 aaPredicted RBP13.33□□□□□ -0.28
FAM238B-201ENST00000413288 NME9Q86XW9 330 aa13.33□□□□□ -0.28
FAM238B-201ENST00000413288 ZNF692Q9BU19 519 aaPredicted RBP13.33□□□□□ -0.28
FAM238B-201ENST00000413288 ZRANB1Q9UGI0 708 aa13.32□□□□□ -0.28
FAM238B-201ENST00000413288 ZBED9Q6R2W3 1325 aa13.32□□□□□ -0.28
FAM238B-201ENST00000413288 POLR3AO14802 1390 aaPredicted RBP13.32□□□□□ -0.28
FAM238B-201ENST00000413288 USP6P35125 1406 aa13.31□□□□□ -0.28
FAM238B-201ENST00000413288 BLMP54132 1417 aaPredicted RBP13.31□□□□□ -0.28
FAM238B-201ENST00000413288 MTHFSP49914 203 aa13.31□□□□□ -0.28
FAM238B-201ENST00000413288 NGDNQ8NEJ9 315 aaKnown RBP13.31□□□□□ -0.28
FAM238B-201ENST00000413288 ADAMTS8Q9UP79 889 aa13.31□□□□□ -0.28
FAM238B-201ENST00000413288 TTC21BQ7Z4L5 1316 aa13.3□□□□□ -0.28
FAM238B-201ENST00000413288 PIK3C2AO00443 1686 aa13.29□□□□□ -0.28
FAM238B-201ENST00000413288 CFAP53Q96M91 514 aa13.29□□□□□ -0.28
FAM238B-201ENST00000413288 SALL2Q9Y467 1007 aaPredicted RBP13.29□□□□□ -0.28
FAM238B-201ENST00000413288 GTF3C3Q9Y5Q9 886 aa13.29□□□□□ -0.28
FAM238B-201ENST00000413288 MARF1Q9Y4F3 1742 aaKnown RBP13.28□□□□□ -0.28
FAM238B-201ENST00000413288 FBLN1P23142 703 aa13.28□□□□□ -0.28
FAM238B-201ENST00000413288 DCAF8L1A6NGE4 600 aa13.27□□□□□ -0.29
FAM238B-201ENST00000413288 COG3Q96JB2 828 aa13.27□□□□□ -0.29
FAM238B-201ENST00000413288 INSRP06213 1382 aa13.27□□□□□ -0.29
FAM238B-201ENST00000413288 COL3A1P02461 1466 aaPredicted RBP13.26□□□□□ -0.29
FAM238B-201ENST00000413288 TMEM94Q12767 1356 aa13.26□□□□□ -0.29
FAM238B-201ENST00000413288 SSH2Q76I76 1423 aa13.26□□□□□ -0.29
FAM238B-201ENST00000413288 CCDC146Q8IYE0 955 aa13.26□□□□□ -0.29
FAM238B-201ENST00000413288 PHF8Q9UPP1 1060 aa13.26□□□□□ -0.29
FAM238B-201ENST00000413288 KIF1AQ12756 1690 aa13.25□□□□□ -0.29
FAM238B-201ENST00000413288 ESCO1Q5FWF5 840 aa13.25□□□□□ -0.29
FAM238B-201ENST00000413288 USP54Q70EL1 1684 aa13.24□□□□□ -0.29
FAM238B-201ENST00000413288 OVOS2A0A0J9YW53 1432 aa13.24□□□□□ -0.29
FAM238B-201ENST00000413288 OVOS2Q6IE36 1432 aa13.24□□□□□ -0.29
FAM238B-201ENST00000413288 TTC21AQ8NDW8 1320 aa13.24□□□□□ -0.29
FAM238B-201ENST00000413288 PPM1GO15355 546 aaPredicted RBP13.24□□□□□ -0.29
FAM238B-201ENST00000413288 ILDR1Q86SU0 546 aaPredicted RBP13.24□□□□□ -0.29
FAM238B-201ENST00000413288 POLKQ9UBT6 870 aa13.23□□□□□ -0.29
FAM238B-201ENST00000413288 PEAK1Q9H792 1746 aa13.22□□□□□ -0.29
FAM238B-201ENST00000413288 ZNF335Q9H4Z2 1342 aaPredicted RBP13.22□□□□□ -0.29
FAM238B-201ENST00000413288 PAK3O75914 559 aaPredicted RBP13.22□□□□□ -0.29
FAM238B-201ENST00000413288 ORAI2Q96SN7 254 aa13.22□□□□□ -0.29
FAM238B-201ENST00000413288 C19orf44Q9H6X5 657 aa13.22□□□□□ -0.29
FAM238B-201ENST00000413288 EMILIN1Q9Y6C2 1016 aa13.22□□□□□ -0.29
FAM238B-201ENST00000413288 LTN1O94822 1766 aa13.22□□□□□ -0.29
FAM238B-201ENST00000413288 C1orf167Q5SNV9 1468 aa13.22□□□□□ -0.29
FAM238B-201ENST00000413288 TRPM3Q9HCF6 1732 aaPredicted RBP13.22□□□□□ -0.29
FAM238B-201ENST00000413288 U2SURPO15042 1029 aaKnown RBP13.21□□□□□ -0.29
FAM238B-201ENST00000413288 SOX12O15370 315 aa13.21□□□□□ -0.29
FAM238B-201ENST00000413288 RRS1Q15050 365 aaKnown RBP13.21□□□□□ -0.29
FAM238B-201ENST00000413288 SMG6Q86US8 1419 aaKnown RBP13.21□□□□□ -0.3
FAM238B-201ENST00000413288 AATKQ6ZMQ8 1374 aa13.2□□□□□ -0.3
FAM238B-201ENST00000413288 LRRC7Q96NW7 1537 aa13.2□□□□□ -0.3
FAM238B-201ENST00000413288 U2AF1L5P0DN76 240 aaPredicted RBP13.2□□□□□ -0.3
FAM238B-201ENST00000413288 ATF3P18847 181 aa13.2□□□□□ -0.3
FAM238B-201ENST00000413288 U2AF1Q01081 240 aaKnown RBP eCLIP13.2□□□□□ -0.3
FAM238B-201ENST00000413288 NUTM2GQ5VZR2 741 aa13.2□□□□□ -0.3
FAM238B-201ENST00000413288 NUDCQ9Y266 331 aa13.2□□□□□ -0.3
FAM238B-201ENST00000413288 CDK12Q9NYV4 1490 aaPredicted RBP13.2□□□□□ -0.3
FAM238B-201ENST00000413288 MST1RQ04912 1400 aa13.2□□□□□ -0.3
FAM238B-201ENST00000413288 NCOA3Q9Y6Q9 1424 aa13.2□□□□□ -0.3
FAM238B-201ENST00000413288 DIAPH1O60610 1272 aaKnown RBP13.19□□□□□ -0.3
FAM238B-201ENST00000413288 PSME1Q06323 249 aa13.19□□□□□ -0.3
FAM238B-201ENST00000413288 MSH6P52701 1360 aa13.19□□□□□ -0.3
FAM238B-201ENST00000413288 USP31Q70CQ4 1352 aa13.19□□□□□ -0.3
FAM238B-201ENST00000413288 PNPLA6Q8IY17 1366 aa13.19□□□□□ -0.3
FAM238B-201ENST00000413288 APAF1O14727 1248 aa13.18□□□□□ -0.3
FAM238B-201ENST00000413288 NLRP6P59044 892 aa13.18□□□□□ -0.3
FAM238B-201ENST00000413288 XPCQ01831 940 aaPredicted RBP13.18□□□□□ -0.3
FAM238B-201ENST00000413288 DCCP43146 1447 aa13.18□□□□□ -0.3
FAM238B-201ENST00000413288 FOXO3O43524 673 aa13.17□□□□□ -0.3
FAM238B-201ENST00000413288 ABTB2Q8N961 1025 aa13.17□□□□□ -0.3
FAM238B-201ENST00000413288 FBXO41Q8TF61 875 aa13.17□□□□□ -0.3
FAM238B-201ENST00000413288 RUNDC1Q96C34 613 aa13.17□□□□□ -0.3
FAM238B-201ENST00000413288 IQSEC2Q5JU85 1478 aa13.16□□□□□ -0.3
FAM238B-201ENST00000413288 DLG5Q8TDM6 1919 aa13.16□□□□□ -0.3
FAM238B-201ENST00000413288 CDCA7LQ96GN5 454 aa13.16□□□□□ -0.3
FAM238B-201ENST00000413288 SUPT16HQ9Y5B9 1047 aaKnown RBP13.16□□□□□ -0.3
FAM238B-201ENST00000413288 ALS2Q96Q42 1657 aa13.15□□□□□ -0.3
FAM238B-201ENST00000413288 CADPS2Q86UW7 1296 aa13.15□□□□□ -0.3
FAM238B-201ENST00000413288 PLEKHG5O94827 1062 aa13.14□□□□□ -0.31
FAM238B-201ENST00000413288 PDE3BQ13370 1112 aa13.14□□□□□ -0.31
FAM238B-201ENST00000413288 NEUROD2Q15784 382 aa13.14□□□□□ -0.31
FAM238B-201ENST00000413288 KRT28Q7Z3Y7 464 aa13.14□□□□□ -0.31
FAM238B-201ENST00000413288 RRP7AQ9Y3A4 280 aaKnown RBP13.14□□□□□ -0.31
FAM238B-201ENST00000413288 SLC4A2P04920 1241 aa13.13□□□□□ -0.31
FAM238B-201ENST00000413288 IL13P35225 146 aa13.13□□□□□ -0.31
FAM238B-201ENST00000413288 TCP11L2Q8N4U5 519 aa13.13□□□□□ -0.31
FAM238B-201ENST00000413288 DDX17Q92841 729 aaKnown RBP13.13□□□□□ -0.31
FAM238B-201ENST00000413288 RGPD1P0DJD0 1748 aa13.13□□□□□ -0.31
FAM238B-201ENST00000413288 MAP3K19Q56UN5 1328 aa13.13□□□□□ -0.31
FAM238B-201ENST00000413288 RGPD5Q99666 1765 aa13.12□□□□□ -0.31
FAM238B-201ENST00000413288 LMOD2Q6P5Q4 547 aa13.12□□□□□ -0.31
FAM238B-201ENST00000413288 RGPD2P0DJD1 1756 aa13.12□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 61.2 ms