RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 ONECUT3O60422 494 aaPredicted RBP27.91■■■□□ 2.06
CPSF7-204ENST00000413232 PAK3O75914 559 aaPredicted RBP27.91■■■□□ 2.06
CPSF7-204ENST00000413232 CCDC9Q9Y3X0 531 aaKnown RBP27.91■■■□□ 2.06
CPSF7-204ENST00000413232 BTG4Q9NY30 223 aa27.9■■■□□ 2.06
CPSF7-204ENST00000413232 COL14A1Q05707 1796 aaKnown RBP27.9■■■□□ 2.06
CPSF7-204ENST00000413232 SRCAPQ6ZRS2 3230 aa27.9■■■□□ 2.06
CPSF7-204ENST00000413232 CCDC125Q86Z20 511 aa27.87■■■□□ 2.05
CPSF7-204ENST00000413232 ACEP12821 1306 aa27.85■■■□□ 2.05
CPSF7-204ENST00000413232 POLR3AO14802 1390 aaPredicted RBP27.85■■■□□ 2.05
CPSF7-204ENST00000413232 CCDC61Q9Y6R9 512 aa27.84■■■□□ 2.05
CPSF7-204ENST00000413232 PHRF1Q9P1Y6 1649 aaKnown RBP27.84■■■□□ 2.05
CPSF7-204ENST00000413232 NBPF8Q3BBV2 869 aa27.83■■■□□ 2.05
CPSF7-204ENST00000413232 NUTM2GQ5VZR2 741 aa27.83■■■□□ 2.05
CPSF7-204ENST00000413232 L3MBTL2Q969R5 705 aa27.83■■■□□ 2.05
CPSF7-204ENST00000413232 SIN3AQ96ST3 1273 aa27.83■■■□□ 2.05
CPSF7-204ENST00000413232 BLMP54132 1417 aaPredicted RBP27.82■■■□□ 2.04
CPSF7-204ENST00000413232 PLEKHG3A1L390 1219 aa27.81■■■□□ 2.04
CPSF7-204ENST00000413232 FAM98CQ17RN3 349 aaKnown RBP27.81■■■□□ 2.04
CPSF7-204ENST00000413232 KRT27Q7Z3Y8 459 aa27.8■■■□□ 2.04
CPSF7-204ENST00000413232 QRICH2Q9H0J4 1663 aa27.8■■■□□ 2.04
CPSF7-204ENST00000413232 KIAA0232Q92628 1395 aa27.79■■■□□ 2.04
CPSF7-204ENST00000413232 DEFB132Q7Z7B7 95 aa27.79■■■□□ 2.04
CPSF7-204ENST00000413232 PRDM11Q9NQV5 511 aa27.79■■■□□ 2.04
CPSF7-204ENST00000413232 CENPJQ9HC77 1338 aaPredicted RBP27.78■■■□□ 2.04
CPSF7-204ENST00000413232 CHRNA2Q15822 529 aa27.78■■■□□ 2.04
CPSF7-204ENST00000413232 SPATA31A5Q5VU36 1347 aa27.77■■■□□ 2.04
CPSF7-204ENST00000413232 SPATA31A7Q8IWB4 1347 aa27.77■■■□□ 2.04
CPSF7-204ENST00000413232 CABP2Q9NPB3 220 aa27.77■■■□□ 2.04
CPSF7-204ENST00000413232 ZC3H6P61129 1189 aaKnown RBP27.76■■■□□ 2.03
CPSF7-204ENST00000413232 A0A0G2JS52 829 aa27.75■■■□□ 2.03
CPSF7-204ENST00000413232 SRPK2P78362 688 aaKnown RBP27.75■■■□□ 2.03
CPSF7-204ENST00000413232 MYT1Q01538 1121 aa27.75■■■□□ 2.03
CPSF7-204ENST00000413232 ZRANB1Q9UGI0 708 aa27.75■■■□□ 2.03
CPSF7-204ENST00000413232 TRPM1Q7Z4N2 1603 aa27.74■■■□□ 2.03
CPSF7-204ENST00000413232 PPIP5K1Q6PFW1 1433 aa27.74■■■□□ 2.03
CPSF7-204ENST00000413232 THSD7AQ9UPZ6 1657 aa27.72■■■□□ 2.03
CPSF7-204ENST00000413232 NEUROD1Q13562 356 aa27.72■■■□□ 2.03
CPSF7-204ENST00000413232 FAM182BQ5T319 152 aa27.72■■■□□ 2.03
CPSF7-204ENST00000413232 NRKQ7Z2Y5 1582 aa27.71■■■□□ 2.03
CPSF7-204ENST00000413232 ABTB2Q8N961 1025 aa27.71■■■□□ 2.03
CPSF7-204ENST00000413232 STRN4Q9NRL3 753 aa27.69■■■□□ 2.02
CPSF7-204ENST00000413232 SPATA31A1Q5TZJ5 1347 aa27.68■■■□□ 2.02
CPSF7-204ENST00000413232 CABP1Q9NZU7 370 aa27.67■■■□□ 2.02
CPSF7-204ENST00000413232 CAMTA1Q9Y6Y1 1673 aa27.67■■■□□ 2.02
CPSF7-204ENST00000413232 USP19O94966 1318 aa27.67■■■□□ 2.02
CPSF7-204ENST00000413232 SF3B2Q13435 895 aaKnown RBP27.66■■■□□ 2.02
CPSF7-204ENST00000413232 LMO7Q8WWI1 1683 aa27.65■■■□□ 2.02
CPSF7-204ENST00000413232 CPDO75976 1380 aa27.61■■■□□ 2.01
CPSF7-204ENST00000413232 USP6P35125 1406 aa27.61■■■□□ 2.01
CPSF7-204ENST00000413232 SSH2Q76I76 1423 aa27.61■■■□□ 2.01
CPSF7-204ENST00000413232 GCP02774 474 aa27.61■■■□□ 2.01
CPSF7-204ENST00000413232 NLRP13Q86W25 1043 aa27.61■■■□□ 2.01
CPSF7-204ENST00000413232 USP35Q9P2H5 1018 aa27.61■■■□□ 2.01
CPSF7-204ENST00000413232 LARP1Q6PKG0 1096 aaKnown RBP27.6■■■□□ 2.01
CPSF7-204ENST00000413232 RGPD1P0DJD0 1748 aa27.6■■■□□ 2.01
CPSF7-204ENST00000413232 ROCK2O75116 1388 aaKnown RBP27.6■■■□□ 2.01
CPSF7-204ENST00000413232 TNS1Q9HBL0 1735 aaKnown RBP27.58■■■□□ 2.01
CPSF7-204ENST00000413232 EVA1CP58658 441 aa27.58■■■□□ 2.01
CPSF7-204ENST00000413232 EVC2Q86UK5 1308 aa27.58■■■□□ 2.01
CPSF7-204ENST00000413232 PIK3C2AO00443 1686 aa27.57■■■□□ 2
CPSF7-204ENST00000413232 BAG6P46379 1132 aa27.56■■■□□ 2
CPSF7-204ENST00000413232 EN1Q05925 392 aaPredicted RBP27.56■■■□□ 2
CPSF7-204ENST00000413232 BRD4O60885 1362 aaPredicted RBP27.56■■■□□ 2
CPSF7-204ENST00000413232 AKAP12Q02952 1782 aa27.55■■■□□ 2
CPSF7-204ENST00000413232 NLRP6P59044 892 aa27.54■■■□□ 2
CPSF7-204ENST00000413232 BARGINQ6ZT62 677 aa27.54■■■□□ 2
CPSF7-204ENST00000413232 SLIT3O75094 1523 aa27.53■■■□□ 2
CPSF7-204ENST00000413232 COL5A2P05997 1499 aaPredicted RBP27.52■■■□□ 2
CPSF7-204ENST00000413232 COL18A1P39060 1754 aa27.52■■■□□ 2
CPSF7-204ENST00000413232 TCP11L2Q8N4U5 519 aa27.5■■□□□ 1.99
CPSF7-204ENST00000413232 ZBTB7CA1YPR0 619 aa27.49■■□□□ 1.99
CPSF7-204ENST00000413232 PSDA5PKW4 1024 aaPredicted RBP27.49■■□□□ 1.99
CPSF7-204ENST00000413232 TRIM37O94972 964 aa27.49■■□□□ 1.99
CPSF7-204ENST00000413232 RGPD5Q99666 1765 aa27.49■■□□□ 1.99
CPSF7-204ENST00000413232 FAM196AQ6ZSG2 479 aa27.48■■□□□ 1.99
CPSF7-204ENST00000413232 TTC21BQ7Z4L5 1316 aa27.47■■□□□ 1.99
CPSF7-204ENST00000413232 DISP2A7MBM2 1401 aa27.47■■□□□ 1.99
CPSF7-204ENST00000413232 EZH2Q15910 746 aaKnown RBP27.46■■□□□ 1.99
CPSF7-204ENST00000413232 AATKQ6ZMQ8 1374 aa27.46■■□□□ 1.99
CPSF7-204ENST00000413232 PARP4Q9UKK3 1724 aaKnown RBP27.45■■□□□ 1.99
CPSF7-204ENST00000413232 CPSF1Q10570 1443 aaKnown RBP27.45■■□□□ 1.98
CPSF7-204ENST00000413232 AXIN2Q9Y2T1 843 aa27.45■■□□□ 1.98
CPSF7-204ENST00000413232 PDE3BQ13370 1112 aa27.44■■□□□ 1.98
CPSF7-204ENST00000413232 ZNF692Q9BU19 519 aaPredicted RBP27.44■■□□□ 1.98
CPSF7-204ENST00000413232 THRAP3Q9Y2W1 955 aaKnown RBP27.43■■□□□ 1.98
CPSF7-204ENST00000413232 CRB1P82279 1406 aa27.42■■□□□ 1.98
CPSF7-204ENST00000413232 MON2Q7Z3U7 1717 aa27.42■■□□□ 1.98
CPSF7-204ENST00000413232 CAMKK2Q96RR4 588 aa27.42■■□□□ 1.98
CPSF7-204ENST00000413232 CARD11Q9BXL7 1154 aa27.41■■□□□ 1.98
CPSF7-204ENST00000413232 SBNO2Q9Y2G9 1366 aa27.4■■□□□ 1.98
CPSF7-204ENST00000413232 ARHGEF25Q86VW2 580 aa27.4■■□□□ 1.98
CPSF7-204ENST00000413232 LRP5O75197 1615 aa27.39■■□□□ 1.98
CPSF7-204ENST00000413232 SOX12O15370 315 aa27.39■■□□□ 1.98
CPSF7-204ENST00000413232 APBA3O96018 575 aa27.39■■□□□ 1.98
CPSF7-204ENST00000413232 KTN1Q86UP2 1357 aaKnown RBP27.38■■□□□ 1.97
CPSF7-204ENST00000413232 TTC21AQ8NDW8 1320 aa27.38■■□□□ 1.97
CPSF7-204ENST00000413232 CD163L1Q9NR16 1453 aa27.38■■□□□ 1.97
CPSF7-204ENST00000413232 R3HDM1Q15032 1099 aaKnown RBP27.37■■□□□ 1.97
CPSF7-204ENST00000413232 SBF2Q86WG5 1849 aa27.37■■□□□ 1.97
CPSF7-204ENST00000413232 WNK3Q9BYP7 1800 aa27.37■■□□□ 1.97
Retrieved 100 of 20,778 RNA–protein pairs in 41.9 ms