RNA–Protein interactions for RNA: ENST00000412342.5

HDAC8-210, Transcript of histone deacetylase 8, humanhuman

TSL 1 (best)

Gene HDAC8, Length 679 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-210ENST00000412342 SLC24A1O60721 1099 aa18.52■□□□□ 0.56
HDAC8-210ENST00000412342 BRD4O60885 1362 aaPredicted RBP18.52■□□□□ 0.55
HDAC8-210ENST00000412342 PIK3C2AO00443 1686 aa18.51■□□□□ 0.55
HDAC8-210ENST00000412342 HSPA5P11021 654 aaKnown RBP18.5■□□□□ 0.55
HDAC8-210ENST00000412342 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
HDAC8-210ENST00000412342 TMF1P82094 1093 aa18.49■□□□□ 0.55
HDAC8-210ENST00000412342 NINLQ9Y2I6 1382 aa18.48■□□□□ 0.55
HDAC8-210ENST00000412342 USP54Q70EL1 1684 aa18.47■□□□□ 0.55
HDAC8-210ENST00000412342 PAK3O75914 559 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-210ENST00000412342 CABLES1Q8TDN4 633 aa18.47■□□□□ 0.55
HDAC8-210ENST00000412342 PHF23Q9BUL5 403 aaPredicted RBP18.47■□□□□ 0.55
HDAC8-210ENST00000412342 SLC12A5Q9H2X9 1139 aa18.47■□□□□ 0.55
HDAC8-210ENST00000412342 A0A1W2PP64 1363 aa18.46■□□□□ 0.55
HDAC8-210ENST00000412342 ADAMTS2O95450 1211 aa18.46■□□□□ 0.55
HDAC8-210ENST00000412342 LMOD2Q6P5Q4 547 aa18.46■□□□□ 0.55
HDAC8-210ENST00000412342 ZNF692Q9BU19 519 aaPredicted RBP18.46■□□□□ 0.55
HDAC8-210ENST00000412342 KTN1Q86UP2 1357 aaKnown RBP18.45■□□□□ 0.54
HDAC8-210ENST00000412342 PLCH1Q4KWH8 1693 aa18.45■□□□□ 0.54
HDAC8-210ENST00000412342 MEX3CQ5U5Q3 659 aaKnown RBP18.45■□□□□ 0.54
HDAC8-210ENST00000412342 TMC1Q8TDI8 760 aa18.44■□□□□ 0.54
HDAC8-210ENST00000412342 USP19O94966 1318 aa18.44■□□□□ 0.54
HDAC8-210ENST00000412342 TTC21BQ7Z4L5 1316 aa18.44■□□□□ 0.54
HDAC8-210ENST00000412342 SLIT3O75094 1523 aa18.44■□□□□ 0.54
HDAC8-210ENST00000412342 TNKS1BP1Q9C0C2 1729 aaKnown RBP18.43■□□□□ 0.54
HDAC8-210ENST00000412342 C8orf37Q96NL8 207 aa18.43■□□□□ 0.54
HDAC8-210ENST00000412342 AFF2P51816 1311 aa18.43■□□□□ 0.54
HDAC8-210ENST00000412342 SLIT2O94813 1529 aa18.43■□□□□ 0.54
HDAC8-210ENST00000412342 CDCA8Q53HL2 280 aa18.42■□□□□ 0.54
HDAC8-210ENST00000412342 NWD2Q9ULI1 1742 aa18.42■□□□□ 0.54
HDAC8-210ENST00000412342 ANKRD36BQ8N2N9 1353 aa18.42■□□□□ 0.54
HDAC8-210ENST00000412342 EDC4Q6P2E9 1401 aaKnown RBP18.41■□□□□ 0.54
HDAC8-210ENST00000412342 NRAPQ86VF7 1730 aa18.41■□□□□ 0.54
HDAC8-210ENST00000412342 NUTM2GQ5VZR2 741 aa18.41■□□□□ 0.54
HDAC8-210ENST00000412342 POTEAQ6S8J7 498 aa18.41■□□□□ 0.54
HDAC8-210ENST00000412342 FNBP4Q8N3X1 1017 aaPredicted RBP18.41■□□□□ 0.54
HDAC8-210ENST00000412342 ABTB2Q8N961 1025 aa18.41■□□□□ 0.54
HDAC8-210ENST00000412342 TTC21AQ8NDW8 1320 aa18.41■□□□□ 0.54
HDAC8-210ENST00000412342 BCL9LQ86UU0 1499 aa18.4■□□□□ 0.54
HDAC8-210ENST00000412342 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
HDAC8-210ENST00000412342 ILDR2Q71H61 639 aa18.4■□□□□ 0.54
HDAC8-210ENST00000412342 TERF2IPQ9NYB0 399 aa18.4■□□□□ 0.54
HDAC8-210ENST00000412342 C11orf95C9JLR9 678 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-210ENST00000412342 PLEKHG5O94827 1062 aa18.39■□□□□ 0.53
HDAC8-210ENST00000412342 HDGFL2Q7Z4V5 671 aaPredicted RBP18.39■□□□□ 0.53
HDAC8-210ENST00000412342 ZNF772Q68DY9 489 aaPredicted RBP18.38■□□□□ 0.53
HDAC8-210ENST00000412342 NGLY1Q96IV0 654 aa18.38■□□□□ 0.53
HDAC8-210ENST00000412342 USP31Q70CQ4 1352 aa18.38■□□□□ 0.53
HDAC8-210ENST00000412342 NLRP13Q86W25 1043 aa18.37■□□□□ 0.53
HDAC8-210ENST00000412342 LMO7Q8WWI1 1683 aa18.37■□□□□ 0.53
HDAC8-210ENST00000412342 OVOS2A0A0J9YW53 1432 aa18.36■□□□□ 0.53
HDAC8-210ENST00000412342 ATRNO75882 1429 aa18.36■□□□□ 0.53
HDAC8-210ENST00000412342 NFAT5O94916 1531 aa18.36■□□□□ 0.53
HDAC8-210ENST00000412342 HAP1P54257 671 aaPredicted RBP18.36■□□□□ 0.53
HDAC8-210ENST00000412342 OVOS2Q6IE36 1432 aa18.36■□□□□ 0.53
HDAC8-210ENST00000412342 CPDO75976 1380 aa18.35■□□□□ 0.53
HDAC8-210ENST00000412342 KIAA0232Q92628 1395 aa18.35■□□□□ 0.53
HDAC8-210ENST00000412342 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
HDAC8-210ENST00000412342 NLRP6P59044 892 aa18.35■□□□□ 0.53
HDAC8-210ENST00000412342 KIF20BQ96Q89 1820 aa18.35■□□□□ 0.53
HDAC8-210ENST00000412342 NME9Q86XW9 330 aa18.34■□□□□ 0.53
HDAC8-210ENST00000412342 SUGP2Q8IX01 1082 aaKnown RBP eCLIP18.34■□□□□ 0.53
HDAC8-210ENST00000412342 ZRANB1Q9UGI0 708 aa18.34■□□□□ 0.53
HDAC8-210ENST00000412342 USP21Q9UK80 565 aa18.34■□□□□ 0.53
HDAC8-210ENST00000412342 COL18A1P39060 1754 aa18.34■□□□□ 0.53
HDAC8-210ENST00000412342 GCP02774 474 aa18.33■□□□□ 0.52
HDAC8-210ENST00000412342 KIF7Q2M1P5 1343 aa18.31■□□□□ 0.52
HDAC8-210ENST00000412342 GLI3P10071 1580 aa18.31■□□□□ 0.52
HDAC8-210ENST00000412342 CARD14Q9BXL6 1004 aa18.31■□□□□ 0.52
HDAC8-210ENST00000412342 ZC3H6P61129 1189 aaKnown RBP18.3■□□□□ 0.52
HDAC8-210ENST00000412342 UNC5CLQ8IV45 518 aa18.3■□□□□ 0.52
HDAC8-210ENST00000412342 PRDM11Q9NQV5 511 aa18.3■□□□□ 0.52
HDAC8-210ENST00000412342 CAMTA1Q9Y6Y1 1673 aa18.3■□□□□ 0.52
HDAC8-210ENST00000412342 CDK12Q9NYV4 1490 aaPredicted RBP18.29■□□□□ 0.52
HDAC8-210ENST00000412342 QTRT2Q9H974 415 aaKnown RBP18.29■□□□□ 0.52
HDAC8-210ENST00000412342 NSD3Q9BZ95 1437 aa18.29■□□□□ 0.52
HDAC8-210ENST00000412342 LTN1O94822 1766 aa18.29■□□□□ 0.52
HDAC8-210ENST00000412342 CHRNA2Q15822 529 aa18.28■□□□□ 0.52
HDAC8-210ENST00000412342 TRPC5Q9UL62 973 aaPredicted RBP18.28■□□□□ 0.52
HDAC8-210ENST00000412342 POLR3GLQ9BT43 218 aa18.27■□□□□ 0.52
HDAC8-210ENST00000412342 BTG4Q9NY30 223 aa18.27■□□□□ 0.52
HDAC8-210ENST00000412342 ABCC6O95255 1503 aa18.27■□□□□ 0.51
HDAC8-210ENST00000412342 RGPD5Q99666 1765 aa18.27■□□□□ 0.51
HDAC8-210ENST00000412342 ANKRD26Q9UPS8 1709 aa18.26■□□□□ 0.51
HDAC8-210ENST00000412342 FYB1O15117 783 aa18.26■□□□□ 0.51
HDAC8-210ENST00000412342 RBM6P78332 1123 aaKnown RBP18.26■□□□□ 0.51
HDAC8-210ENST00000412342 KCNH5Q8NCM2 988 aa18.26■□□□□ 0.51
HDAC8-210ENST00000412342 AATKQ6ZMQ8 1374 aa18.26■□□□□ 0.51
HDAC8-210ENST00000412342 CCDC7Q96M83 1385 aa18.26■□□□□ 0.51
HDAC8-210ENST00000412342 RGS12O14924 1447 aa18.25■□□□□ 0.51
HDAC8-210ENST00000412342 RXRBP28702 533 aa18.25■□□□□ 0.51
HDAC8-210ENST00000412342 VPS72Q15906 364 aa18.25■□□□□ 0.51
HDAC8-210ENST00000412342 ARHGEF25Q86VW2 580 aa18.25■□□□□ 0.51
HDAC8-210ENST00000412342 WASHC2AQ641Q2 1341 aa18.24■□□□□ 0.51
HDAC8-210ENST00000412342 COL5A2P05997 1499 aaPredicted RBP18.24■□□□□ 0.51
HDAC8-210ENST00000412342 GJD4Q96KN9 370 aaPredicted RBP18.23■□□□□ 0.51
HDAC8-210ENST00000412342 GGNBP2Q9H3C7 697 aa18.22■□□□□ 0.51
HDAC8-210ENST00000412342 PANK3Q9H999 370 aa18.22■□□□□ 0.51
HDAC8-210ENST00000412342 SOX12O15370 315 aa18.21■□□□□ 0.51
HDAC8-210ENST00000412342 COG3Q96JB2 828 aa18.21■□□□□ 0.51
HDAC8-210ENST00000412342 AXIN2Q9Y2T1 843 aa18.2■□□□□ 0.5
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms