RNA–Protein interactions for RNA: ENST00000412167.6

KIT-202, Transcript of KIT proto-oncogene receptor tyrosine kinase, humanhuman

APPRIS ALT1 TSL 1 (best)

Gene KIT, Length 3,470 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KIT-202ENST00000412167 RIPK4P57078 832 aa13.54□□□□□ -0.24
KIT-202ENST00000412167 LRRC59Q96AG4 307 aaKnown RBP13.54□□□□□ -0.24
KIT-202ENST00000412167 FER1L4A9Z1Z3 1794 aa13.54□□□□□ -0.24
KIT-202ENST00000412167 BRD4O60885 1362 aaPredicted RBP13.54□□□□□ -0.24
KIT-202ENST00000412167 BCAR3O75815 825 aa13.54□□□□□ -0.24
KIT-202ENST00000412167 ATAD2Q6PL18 1390 aa13.54□□□□□ -0.24
KIT-202ENST00000412167 ZFYVE9O95405 1425 aa13.54□□□□□ -0.24
KIT-202ENST00000412167 AEBP2Q6ZN18 517 aaPredicted RBP13.54□□□□□ -0.24
KIT-202ENST00000412167 TULP4Q9NRJ4 1543 aa13.53□□□□□ -0.24
KIT-202ENST00000412167 ZBED9Q6R2W3 1325 aa13.53□□□□□ -0.24
KIT-202ENST00000412167 NUTM2BA6NNL0 878 aaPredicted RBP13.53□□□□□ -0.24
KIT-202ENST00000412167 NUTM2EB1AL46 878 aaPredicted RBP13.53□□□□□ -0.24
KIT-202ENST00000412167 C20orf194Q5TEA3 1177 aa13.53□□□□□ -0.24
KIT-202ENST00000412167 NUTM2AQ8IVF1 878 aaPredicted RBP13.53□□□□□ -0.24
KIT-202ENST00000412167 PPLO60437 1756 aa13.53□□□□□ -0.24
KIT-202ENST00000412167 TTC21BQ7Z4L5 1316 aa13.53□□□□□ -0.24
KIT-202ENST00000412167 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
KIT-202ENST00000412167 ANKRD36BQ8N2N9 1353 aa13.52□□□□□ -0.24
KIT-202ENST00000412167 RCAN3Q9UKA8 241 aa13.52□□□□□ -0.25
KIT-202ENST00000412167 ABCC11Q96J66 1382 aa13.52□□□□□ -0.25
KIT-202ENST00000412167 MCM10Q7L590 875 aa13.52□□□□□ -0.25
KIT-202ENST00000412167 STRN4Q9NRL3 753 aa13.52□□□□□ -0.25
KIT-202ENST00000412167 C3P01024 1663 aa13.51□□□□□ -0.25
KIT-202ENST00000412167 GOLGA2Q08379 1002 aa13.51□□□□□ -0.25
KIT-202ENST00000412167 EXOC6Q8TAG9 804 aa13.51□□□□□ -0.25
KIT-202ENST00000412167 TNNQ9UQP3 1299 aa13.51□□□□□ -0.25
KIT-202ENST00000412167 QRICH2Q9H0J4 1663 aa13.5□□□□□ -0.25
KIT-202ENST00000412167 SPATA31D1Q6ZQQ2 1576 aa13.5□□□□□ -0.25
KIT-202ENST00000412167 PLEKHG1Q9ULL1 1385 aa13.5□□□□□ -0.25
KIT-202ENST00000412167 KRT24Q2M2I5 525 aa13.5□□□□□ -0.25
KIT-202ENST00000412167 CCDC136Q96JN2 1154 aa13.49□□□□□ -0.25
KIT-202ENST00000412167 TMEM94Q12767 1356 aa13.49□□□□□ -0.25
KIT-202ENST00000412167 MYT1Q01538 1121 aa13.49□□□□□ -0.25
KIT-202ENST00000412167 KRT28Q7Z3Y7 464 aa13.49□□□□□ -0.25
KIT-202ENST00000412167 ADAMTS2O95450 1211 aa13.48□□□□□ -0.25
KIT-202ENST00000412167 NLRP2Q9NX02 1062 aa13.48□□□□□ -0.25
KIT-202ENST00000412167 NLRP1Q9C000 1473 aa13.47□□□□□ -0.25
KIT-202ENST00000412167 MAP3K19Q56UN5 1328 aa13.47□□□□□ -0.25
KIT-202ENST00000412167 NPHP4O75161 1426 aaPredicted RBP13.46□□□□□ -0.25
KIT-202ENST00000412167 NRXN1Q9ULB1 1477 aa13.46□□□□□ -0.25
KIT-202ENST00000412167 KDM5AP29375 1690 aaKnown RBP13.46□□□□□ -0.25
KIT-202ENST00000412167 IQGAP1P46940 1657 aa13.46□□□□□ -0.26
KIT-202ENST00000412167 WWC1Q8IX03 1113 aa13.45□□□□□ -0.26
KIT-202ENST00000412167 ARXQ96QS3 562 aa13.45□□□□□ -0.26
KIT-202ENST00000412167 PANK1Q8TE04 598 aa13.45□□□□□ -0.26
KIT-202ENST00000412167 RUNDC1Q96C34 613 aa13.45□□□□□ -0.26
KIT-202ENST00000412167 CCDC9Q9Y3X0 531 aaKnown RBP13.45□□□□□ -0.26
KIT-202ENST00000412167 EIF4A2Q14240 407 aaKnown RBP13.45□□□□□ -0.26
KIT-202ENST00000412167 ZC3H13Q5T200 1668 aaKnown RBP13.44□□□□□ -0.26
KIT-202ENST00000412167 CRBNQ96SW2 442 aa13.43□□□□□ -0.26
KIT-202ENST00000412167 ZNF692Q9BU19 519 aaPredicted RBP13.43□□□□□ -0.26
KIT-202ENST00000412167 SBNO2Q9Y2G9 1366 aa13.43□□□□□ -0.26
KIT-202ENST00000412167 EXOSC9Q06265 439 aaKnown RBP13.43□□□□□ -0.26
KIT-202ENST00000412167 C19orf44Q9H6X5 657 aa13.43□□□□□ -0.26
KIT-202ENST00000412167 COG6Q9Y2V7 657 aa13.43□□□□□ -0.26
KIT-202ENST00000412167 TMPOP42166 694 aaKnown RBP13.42□□□□□ -0.26
KIT-202ENST00000412167 CEP170BQ9Y4F5 1589 aaPredicted RBP13.42□□□□□ -0.26
KIT-202ENST00000412167 NGEFQ8N5V2 710 aa13.42□□□□□ -0.26
KIT-202ENST00000412167 ZNF330Q9Y3S2 320 aaPredicted RBP13.42□□□□□ -0.26
KIT-202ENST00000412167 CPS1P31327 1500 aa13.41□□□□□ -0.26
KIT-202ENST00000412167 UBR1Q8IWV7 1749 aa13.41□□□□□ -0.26
KIT-202ENST00000412167 APBB1O00213 710 aa13.4□□□□□ -0.26
KIT-202ENST00000412167 ARHGEF28Q8N1W1 1705 aaKnown RBP13.4□□□□□ -0.26
KIT-202ENST00000412167 GCP02774 474 aa13.39□□□□□ -0.27
KIT-202ENST00000412167 EIF2S2P20042 333 aaKnown RBP13.39□□□□□ -0.27
KIT-202ENST00000412167 RGS3P49796 1198 aa13.39□□□□□ -0.27
KIT-202ENST00000412167 EYA1Q99502 592 aa13.39□□□□□ -0.27
KIT-202ENST00000412167 PIP4K2AP48426 406 aaPredicted RBP13.39□□□□□ -0.27
KIT-202ENST00000412167 NPM2Q86SE8 214 aaKnown RBP13.39□□□□□ -0.27
KIT-202ENST00000412167 SMC4Q9NTJ3 1288 aa13.39□□□□□ -0.27
KIT-202ENST00000412167 AXIN2Q9Y2T1 843 aa13.39□□□□□ -0.27
KIT-202ENST00000412167 MPRIPQ6WCQ1 1025 aa13.38□□□□□ -0.27
KIT-202ENST00000412167 DDX54Q8TDD1 881 aaKnown RBP13.38□□□□□ -0.27
KIT-202ENST00000412167 PRDM11Q9NQV5 511 aa13.38□□□□□ -0.27
KIT-202ENST00000412167 IFT172Q9UG01 1749 aa13.38□□□□□ -0.27
KIT-202ENST00000412167 DUSP27Q5VZP5 1158 aa13.38□□□□□ -0.27
KIT-202ENST00000412167 RTF1Q92541 710 aaKnown RBP13.38□□□□□ -0.27
KIT-202ENST00000412167 SLAIN2Q9P270 581 aa13.38□□□□□ -0.27
KIT-202ENST00000412167 ANXA1P04083 346 aa13.37□□□□□ -0.27
KIT-202ENST00000412167 RRP1P56182 461 aaKnown RBP13.37□□□□□ -0.27
KIT-202ENST00000412167 TSPYL6Q8N831 410 aa13.37□□□□□ -0.27
KIT-202ENST00000412167 SYTL4Q96C24 671 aaPredicted RBP13.37□□□□□ -0.27
KIT-202ENST00000412167 UTRNP46939 3433 aa13.37□□□□□ -0.27
KIT-202ENST00000412167 CD163L1Q9NR16 1453 aa13.37□□□□□ -0.27
KIT-202ENST00000412167 EVA1CP58658 441 aa13.36□□□□□ -0.27
KIT-202ENST00000412167 NKTRP30414 1462 aaKnown RBP13.36□□□□□ -0.27
KIT-202ENST00000412167 NBPF6Q5VWK0 638 aa13.36□□□□□ -0.27
KIT-202ENST00000412167 SLC4A10Q6U841 1118 aa13.36□□□□□ -0.27
KIT-202ENST00000412167 NBPF4Q96M43 638 aa13.36□□□□□ -0.27
KIT-202ENST00000412167 PLEKHG3A1L390 1219 aa13.35□□□□□ -0.27
KIT-202ENST00000412167 IL13P35225 146 aa13.35□□□□□ -0.27
KIT-202ENST00000412167 C1orf115Q9H7X2 142 aa13.35□□□□□ -0.27
KIT-202ENST00000412167 MYO3AQ8NEV4 1616 aa13.35□□□□□ -0.27
KIT-202ENST00000412167 FTSJ3Q8IY81 847 aaKnown RBP13.35□□□□□ -0.27
KIT-202ENST00000412167 REREQ9P2R6 1566 aa13.35□□□□□ -0.27
KIT-202ENST00000412167 SLFN5Q08AF3 891 aa13.34□□□□□ -0.27
KIT-202ENST00000412167 MTHFSDQ2M296 383 aaKnown RBP13.34□□□□□ -0.27
KIT-202ENST00000412167 CADPS2Q86UW7 1296 aa13.34□□□□□ -0.27
KIT-202ENST00000412167 ATP7BP35670 1465 aa13.34□□□□□ -0.27
KIT-202ENST00000412167 NRXN3Q9Y4C0 1643 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms