RNA–Protein interactions for RNA: ENST00000411827.1

CDC42-204, Transcript of cell division cycle 42, humanhuman

TSL 3

Gene CDC42, Length 597 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-204ENST00000411827 TTC21BQ7Z4L5 1316 aa25.47■■□□□ 1.67
CDC42-204ENST00000411827 DIEXFQ68CQ4 756 aaKnown RBP25.47■■□□□ 1.67
CDC42-204ENST00000411827 AMER1Q5JTC6 1135 aaPredicted RBP25.45■■□□□ 1.66
CDC42-204ENST00000411827 SOS2Q07890 1332 aaPredicted RBP25.44■■□□□ 1.66
CDC42-204ENST00000411827 ROBO1Q9Y6N7 1651 aa25.42■■□□□ 1.66
CDC42-204ENST00000411827 PIP4K2BP78356 416 aa25.42■■□□□ 1.66
CDC42-204ENST00000411827 AHDC1Q5TGY3 1603 aaPredicted RBP25.41■■□□□ 1.66
CDC42-204ENST00000411827 NRKQ7Z2Y5 1582 aa25.41■■□□□ 1.66
CDC42-204ENST00000411827 NHSL1Q5SYE7 1610 aa25.41■■□□□ 1.66
CDC42-204ENST00000411827 PXDNQ92626 1479 aa25.4■■□□□ 1.66
CDC42-204ENST00000411827 FYB1O15117 783 aa25.4■■□□□ 1.66
CDC42-204ENST00000411827 ANP32CO43423 234 aa25.4■■□□□ 1.66
CDC42-204ENST00000411827 RALBP1Q15311 655 aa25.4■■□□□ 1.66
CDC42-204ENST00000411827 ARHGEF10O15013 1369 aa25.4■■□□□ 1.66
CDC42-204ENST00000411827 PAK3O75914 559 aaPredicted RBP25.39■■□□□ 1.66
CDC42-204ENST00000411827 HSPA1LP34931 641 aa25.39■■□□□ 1.66
CDC42-204ENST00000411827 SUGP2Q8IX01 1082 aaKnown RBP eCLIP25.39■■□□□ 1.66
CDC42-204ENST00000411827 USP31Q70CQ4 1352 aa25.39■■□□□ 1.65
CDC42-204ENST00000411827 LRRC59Q96AG4 307 aaKnown RBP25.38■■□□□ 1.65
CDC42-204ENST00000411827 NLRP13Q86W25 1043 aa25.37■■□□□ 1.65
CDC42-204ENST00000411827 ABTB2Q8N961 1025 aa25.37■■□□□ 1.65
CDC42-204ENST00000411827 COG3Q96JB2 828 aa25.37■■□□□ 1.65
CDC42-204ENST00000411827 SPATA31A3Q5VYP0 1347 aa25.37■■□□□ 1.65
CDC42-204ENST00000411827 SCAF1Q9H7N4 1312 aaKnown RBP25.37■■□□□ 1.65
CDC42-204ENST00000411827 TNS3Q68CZ2 1445 aa25.36■■□□□ 1.65
CDC42-204ENST00000411827 TRPM3Q9HCF6 1732 aaPredicted RBP25.34■■□□□ 1.65
CDC42-204ENST00000411827 NLRP6P59044 892 aa25.33■■□□□ 1.65
CDC42-204ENST00000411827 MORC1Q86VD1 984 aa25.33■■□□□ 1.65
CDC42-204ENST00000411827 NME9Q86XW9 330 aa25.33■■□□□ 1.65
CDC42-204ENST00000411827 XPCQ01831 940 aaPredicted RBP25.32■■□□□ 1.64
CDC42-204ENST00000411827 CC2D1BQ5T0F9 858 aaKnown RBP25.32■■□□□ 1.64
CDC42-204ENST00000411827 PRKRIP1Q9H875 184 aaPredicted RBP25.32■■□□□ 1.64
CDC42-204ENST00000411827 KIF20BQ96Q89 1820 aa25.32■■□□□ 1.64
CDC42-204ENST00000411827 PARD3Q8TEW0 1356 aa25.31■■□□□ 1.64
CDC42-204ENST00000411827 GGNBP2Q9H3C7 697 aa25.31■■□□□ 1.64
CDC42-204ENST00000411827 OVOS2A0A0J9YW53 1432 aa25.3■■□□□ 1.64
CDC42-204ENST00000411827 OVOS2Q6IE36 1432 aa25.3■■□□□ 1.64
CDC42-204ENST00000411827 KCNH5Q8NCM2 988 aa25.3■■□□□ 1.64
CDC42-204ENST00000411827 DDX17Q92841 729 aaKnown RBP25.3■■□□□ 1.64
CDC42-204ENST00000411827 USP54Q70EL1 1684 aa25.29■■□□□ 1.64
CDC42-204ENST00000411827 LMOD2Q6P5Q4 547 aa25.28■■□□□ 1.64
CDC42-204ENST00000411827 ALS2Q96Q42 1657 aa25.28■■□□□ 1.64
CDC42-204ENST00000411827 ANKRD26Q9UPS8 1709 aa25.28■■□□□ 1.64
CDC42-204ENST00000411827 PIK3C2AO00443 1686 aa25.27■■□□□ 1.64
CDC42-204ENST00000411827 USP19O94966 1318 aa25.26■■□□□ 1.63
CDC42-204ENST00000411827 AATKQ6ZMQ8 1374 aa25.26■■□□□ 1.63
CDC42-204ENST00000411827 PHLPP1O60346 1717 aa25.26■■□□□ 1.63
CDC42-204ENST00000411827 MYBBP1AQ9BQG0 1328 aaKnown RBP25.24■■□□□ 1.63
CDC42-204ENST00000411827 MED1Q15648 1581 aaPredicted RBP25.23■■□□□ 1.63
CDC42-204ENST00000411827 PHF23Q9BUL5 403 aaPredicted RBP25.23■■□□□ 1.63
CDC42-204ENST00000411827 COL16A1Q07092 1604 aaPredicted RBP25.23■■□□□ 1.63
CDC42-204ENST00000411827 KIF24Q5T7B8 1368 aa25.2■■□□□ 1.63
CDC42-204ENST00000411827 ZRANB1Q9UGI0 708 aa25.2■■□□□ 1.62
CDC42-204ENST00000411827 SLIT3O75094 1523 aa25.2■■□□□ 1.62
CDC42-204ENST00000411827 JCADQ9P266 1359 aa25.19■■□□□ 1.62
CDC42-204ENST00000411827 GCP02774 474 aa25.19■■□□□ 1.62
CDC42-204ENST00000411827 NUTM2GQ5VZR2 741 aa25.18■■□□□ 1.62
CDC42-204ENST00000411827 PNPLA6Q8IY17 1366 aa25.18■■□□□ 1.62
CDC42-204ENST00000411827 CCER2I3L3R5 266 aa25.17■■□□□ 1.62
CDC42-204ENST00000411827 SOCS7O14512 581 aa25.17■■□□□ 1.62
CDC42-204ENST00000411827 PPP2R1AP30153 589 aa25.17■■□□□ 1.62
CDC42-204ENST00000411827 COL22A1Q8NFW1 1626 aaPredicted RBP25.16■■□□□ 1.62
CDC42-204ENST00000411827 CNGB1Q14028 1251 aaPredicted RBP25.16■■□□□ 1.62
CDC42-204ENST00000411827 HAP1P54257 671 aaPredicted RBP25.14■■□□□ 1.62
CDC42-204ENST00000411827 TNNT2P45379 298 aaPredicted RBP25.13■■□□□ 1.61
CDC42-204ENST00000411827 CFAP53Q96M91 514 aa25.13■■□□□ 1.61
CDC42-204ENST00000411827 CPDO75976 1380 aa25.13■■□□□ 1.61
CDC42-204ENST00000411827 SPATA31A6Q5VVP1 1343 aa25.12■■□□□ 1.61
CDC42-204ENST00000411827 SMG6Q86US8 1419 aaKnown RBP25.12■■□□□ 1.61
CDC42-204ENST00000411827 MARF1Q9Y4F3 1742 aaKnown RBP25.12■■□□□ 1.61
CDC42-204ENST00000411827 RTL1A6NKG5 1358 aa25.11■■□□□ 1.61
CDC42-204ENST00000411827 POLKQ9UBT6 870 aa25.11■■□□□ 1.61
CDC42-204ENST00000411827 NFAT5O94916 1531 aa25.11■■□□□ 1.61
CDC42-204ENST00000411827 SHPRHQ149N8 1683 aa25.1■■□□□ 1.61
CDC42-204ENST00000411827 INSRP06213 1382 aa25.1■■□□□ 1.61
CDC42-204ENST00000411827 MTHFSP49914 203 aa25.1■■□□□ 1.61
CDC42-204ENST00000411827 ARHGEF25Q86VW2 580 aa25.1■■□□□ 1.61
CDC42-204ENST00000411827 MIER1Q8N108 512 aa25.1■■□□□ 1.61
CDC42-204ENST00000411827 ABCC6O95255 1503 aa25.09■■□□□ 1.61
CDC42-204ENST00000411827 MAP3K19Q56UN5 1328 aa25.08■■□□□ 1.6
CDC42-204ENST00000411827 PHRF1Q9P1Y6 1649 aaKnown RBP25.08■■□□□ 1.6
CDC42-204ENST00000411827 FLT4P35916 1363 aa25.07■■□□□ 1.6
CDC42-204ENST00000411827 CRYBG1Q9Y4K1 1723 aa25.07■■□□□ 1.6
CDC42-204ENST00000411827 AMPHP49418 695 aa25.07■■□□□ 1.6
CDC42-204ENST00000411827 CDK12Q9NYV4 1490 aaPredicted RBP25.07■■□□□ 1.6
CDC42-204ENST00000411827 CABLES1Q8TDN4 633 aa25.06■■□□□ 1.6
CDC42-204ENST00000411827 SOX12O15370 315 aa25.05■■□□□ 1.6
CDC42-204ENST00000411827 RRS1Q15050 365 aaKnown RBP25.05■■□□□ 1.6
CDC42-204ENST00000411827 IP6K1Q92551 441 aa25.05■■□□□ 1.6
CDC42-204ENST00000411827 MAP2P11137 1827 aaKnown RBP25.03■■□□□ 1.6
CDC42-204ENST00000411827 EMILIN1Q9Y6C2 1016 aa25.03■■□□□ 1.6
CDC42-204ENST00000411827 BLMP54132 1417 aaPredicted RBP25.03■■□□□ 1.6
CDC42-204ENST00000411827 PPM1GO15355 546 aaPredicted RBP25.02■■□□□ 1.6
CDC42-204ENST00000411827 ZC3H6P61129 1189 aaKnown RBP25.02■■□□□ 1.6
CDC42-204ENST00000411827 MRS2Q9HD23 443 aa25.02■■□□□ 1.6
CDC42-204ENST00000411827 PRDM11Q9NQV5 511 aa25.02■■□□□ 1.6
CDC42-204ENST00000411827 ABCA3Q99758 1704 aa25.01■■□□□ 1.59
CDC42-204ENST00000411827 NUDCQ9Y266 331 aa25.01■■□□□ 1.59
CDC42-204ENST00000411827 KIAA0232Q92628 1395 aa25.01■■□□□ 1.59
CDC42-204ENST00000411827 HOXC9P31274 260 aa25■■□□□ 1.59
Retrieved 100 of 20,778 RNA–protein pairs in 18.5 ms