RNA–Protein interactions for RNA: ENST00000411066.1

RN7SKP259-201, Transcript of RNA, 7SK small nuclear pseudogene 259, humanhuman

BASIC

Gene RN7SKP259, Length 333 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP259-201ENST00000411066 XRN1Q8IZH2 1706 aaKnown RBP14.12□□□□□ -0.15
RN7SKP259-201ENST00000411066 CCDC27Q2M243 656 aa14.12□□□□□ -0.15
RN7SKP259-201ENST00000411066 SLC26A8Q96RN1 970 aa14.12□□□□□ -0.15
RN7SKP259-201ENST00000411066 PLEKHG3A1L390 1219 aa14.11□□□□□ -0.15
RN7SKP259-201ENST00000411066 AMOTL2Q9Y2J4 779 aa14.11□□□□□ -0.15
RN7SKP259-201ENST00000411066 AATKQ6ZMQ8 1374 aa14.1□□□□□ -0.15
RN7SKP259-201ENST00000411066 PHF23Q9BUL5 403 aaPredicted RBP14.1□□□□□ -0.15
RN7SKP259-201ENST00000411066 PNNQ9H307 717 aaKnown RBP14.1□□□□□ -0.15
RN7SKP259-201ENST00000411066 PRR36Q9H6K5 1346 aa14.1□□□□□ -0.15
RN7SKP259-201ENST00000411066 WDR63Q8IWG1 891 aa14.09□□□□□ -0.15
RN7SKP259-201ENST00000411066 WWC1Q8IX03 1113 aa14.09□□□□□ -0.15
RN7SKP259-201ENST00000411066 TCP11L2Q8N4U5 519 aa14.09□□□□□ -0.15
RN7SKP259-201ENST00000411066 TSHZ2Q9NRE2 1034 aa14.09□□□□□ -0.15
RN7SKP259-201ENST00000411066 NKTRP30414 1462 aaKnown RBP14.09□□□□□ -0.15
RN7SKP259-201ENST00000411066 U2AF1L5P0DN76 240 aaPredicted RBP14.08□□□□□ -0.16
RN7SKP259-201ENST00000411066 U2AF1Q01081 240 aaKnown RBP eCLIP14.08□□□□□ -0.16
RN7SKP259-201ENST00000411066 PLPPR3Q6T4P5 718 aa14.08□□□□□ -0.16
RN7SKP259-201ENST00000411066 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.08□□□□□ -0.16
RN7SKP259-201ENST00000411066 DIAPH1O60610 1272 aaKnown RBP14.07□□□□□ -0.16
RN7SKP259-201ENST00000411066 B4GALNT3Q6L9W6 998 aa14.07□□□□□ -0.16
RN7SKP259-201ENST00000411066 ANKLE2Q86XL3 938 aa14.07□□□□□ -0.16
RN7SKP259-201ENST00000411066 NRKQ7Z2Y5 1582 aa14.07□□□□□ -0.16
RN7SKP259-201ENST00000411066 MAP2P11137 1827 aaKnown RBP14.06□□□□□ -0.16
RN7SKP259-201ENST00000411066 GOLGA6L2Q8N9W4 650 aaPredicted RBP14.06□□□□□ -0.16
RN7SKP259-201ENST00000411066 CDK12Q9NYV4 1490 aaPredicted RBP14.06□□□□□ -0.16
RN7SKP259-201ENST00000411066 COG3Q96JB2 828 aa14.05□□□□□ -0.16
RN7SKP259-201ENST00000411066 CCDC136Q96JN2 1154 aa14.05□□□□□ -0.16
RN7SKP259-201ENST00000411066 POLKQ9UBT6 870 aa14.05□□□□□ -0.16
RN7SKP259-201ENST00000411066 ANKARQ7Z5J8 1434 aa14.05□□□□□ -0.16
RN7SKP259-201ENST00000411066 CHD2O14647 1828 aaKnown RBP14.04□□□□□ -0.16
RN7SKP259-201ENST00000411066 NME9Q86XW9 330 aa14.04□□□□□ -0.16
RN7SKP259-201ENST00000411066 PLEKHF1Q96S99 279 aa14.04□□□□□ -0.16
RN7SKP259-201ENST00000411066 USP6P35125 1406 aa14.04□□□□□ -0.16
RN7SKP259-201ENST00000411066 U2SURPO15042 1029 aaKnown RBP14.03□□□□□ -0.16
RN7SKP259-201ENST00000411066 SPINK5Q9NQ38 1064 aaPredicted RBP14.03□□□□□ -0.16
RN7SKP259-201ENST00000411066 ACEP12821 1306 aa14.03□□□□□ -0.16
RN7SKP259-201ENST00000411066 TTC21BQ7Z4L5 1316 aa14.03□□□□□ -0.16
RN7SKP259-201ENST00000411066 NCKAP5LQ9HCH0 1330 aa14.03□□□□□ -0.16
RN7SKP259-201ENST00000411066 SSH2Q76I76 1423 aa14.02□□□□□ -0.16
RN7SKP259-201ENST00000411066 TTC21AQ8NDW8 1320 aa14.02□□□□□ -0.17
RN7SKP259-201ENST00000411066 FCHSD2O94868 740 aa14.02□□□□□ -0.17
RN7SKP259-201ENST00000411066 EXOC6Q8TAG9 804 aa14.02□□□□□ -0.17
RN7SKP259-201ENST00000411066 FMN2Q9NZ56 1722 aa14.01□□□□□ -0.17
RN7SKP259-201ENST00000411066 OVOS2A0A0J9YW53 1432 aa14.01□□□□□ -0.17
RN7SKP259-201ENST00000411066 OVOS2Q6IE36 1432 aa14.01□□□□□ -0.17
RN7SKP259-201ENST00000411066 MAPK8IP3Q9UPT6 1336 aa14.01□□□□□ -0.17
RN7SKP259-201ENST00000411066 NALCNQ8IZF0 1738 aa14.01□□□□□ -0.17
RN7SKP259-201ENST00000411066 IL16Q14005 1332 aa14□□□□□ -0.17
RN7SKP259-201ENST00000411066 KCNA6P17658 529 aa14□□□□□ -0.17
RN7SKP259-201ENST00000411066 TMPOP42166 694 aaKnown RBP14□□□□□ -0.17
RN7SKP259-201ENST00000411066 MYH16Q9H6N6 1097 aa14□□□□□ -0.17
RN7SKP259-201ENST00000411066 RRP7AQ9Y3A4 280 aaKnown RBP14□□□□□ -0.17
RN7SKP259-201ENST00000411066 DMRT2Q9Y5R5 561 aa14□□□□□ -0.17
RN7SKP259-201ENST00000411066 NEUROD2Q15784 382 aa13.99□□□□□ -0.17
RN7SKP259-201ENST00000411066 USP31Q70CQ4 1352 aa13.98□□□□□ -0.17
RN7SKP259-201ENST00000411066 NEFMP07197 916 aa13.98□□□□□ -0.17
RN7SKP259-201ENST00000411066 CT47B1P0C2W7 299 aaPredicted RBP13.98□□□□□ -0.17
RN7SKP259-201ENST00000411066 IL13P35225 146 aa13.98□□□□□ -0.17
RN7SKP259-201ENST00000411066 ZRANB1Q9UGI0 708 aa13.98□□□□□ -0.17
RN7SKP259-201ENST00000411066 RGPD8O14715 1765 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP259-201ENST00000411066 LRRC7Q96NW7 1537 aa13.97□□□□□ -0.17
RN7SKP259-201ENST00000411066 PLIN1O60240 522 aa13.97□□□□□ -0.17
RN7SKP259-201ENST00000411066 CRBNQ96SW2 442 aa13.97□□□□□ -0.17
RN7SKP259-201ENST00000411066 RSPH6AQ9H0K4 717 aa13.97□□□□□ -0.17
RN7SKP259-201ENST00000411066 EMILIN1Q9Y6C2 1016 aa13.97□□□□□ -0.17
RN7SKP259-201ENST00000411066 NPHP4O75161 1426 aaPredicted RBP13.97□□□□□ -0.17
RN7SKP259-201ENST00000411066 USP54Q70EL1 1684 aa13.95□□□□□ -0.18
RN7SKP259-201ENST00000411066 PPM1GO15355 546 aaPredicted RBP13.95□□□□□ -0.18
RN7SKP259-201ENST00000411066 NGDNQ8NEJ9 315 aaKnown RBP13.95□□□□□ -0.18
RN7SKP259-201ENST00000411066 TRIM35Q9UPQ4 493 aa13.95□□□□□ -0.18
RN7SKP259-201ENST00000411066 NUTM2FA1L443 756 aa13.94□□□□□ -0.18
RN7SKP259-201ENST00000411066 FBLN1P23142 703 aa13.94□□□□□ -0.18
RN7SKP259-201ENST00000411066 PDE3AQ14432 1141 aa13.94□□□□□ -0.18
RN7SKP259-201ENST00000411066 NWD1Q149M9 1564 aa13.93□□□□□ -0.18
RN7SKP259-201ENST00000411066 ADGRL3Q9HAR2 1447 aa13.93□□□□□ -0.18
RN7SKP259-201ENST00000411066 PRKAR2BP31323 418 aa13.93□□□□□ -0.18
RN7SKP259-201ENST00000411066 RIPK4P57078 832 aa13.93□□□□□ -0.18
RN7SKP259-201ENST00000411066 NFE2L2Q16236 605 aa13.93□□□□□ -0.18
RN7SKP259-201ENST00000411066 RARSP54136 660 aaKnown RBP13.92□□□□□ -0.18
RN7SKP259-201ENST00000411066 CALD1Q05682 793 aaKnown RBP13.92□□□□□ -0.18
RN7SKP259-201ENST00000411066 RRS1Q15050 365 aaKnown RBP13.92□□□□□ -0.18
RN7SKP259-201ENST00000411066 C20orf194Q5TEA3 1177 aa13.92□□□□□ -0.18
RN7SKP259-201ENST00000411066 PMFBP1Q8TBY8 1022 aa13.92□□□□□ -0.18
RN7SKP259-201ENST00000411066 BCAR3O75815 825 aa13.91□□□□□ -0.18
RN7SKP259-201ENST00000411066 AAMPQ13685 434 aa13.91□□□□□ -0.18
RN7SKP259-201ENST00000411066 PIK3C2AO00443 1686 aa13.91□□□□□ -0.18
RN7SKP259-201ENST00000411066 LMOD3Q0VAK6 560 aa13.9□□□□□ -0.18
RN7SKP259-201ENST00000411066 RBM19Q9Y4C8 960 aaKnown RBP13.9□□□□□ -0.18
RN7SKP259-201ENST00000411066 KIF24Q5T7B8 1368 aa13.9□□□□□ -0.18
RN7SKP259-201ENST00000411066 RGPD1P0DJD0 1748 aa13.9□□□□□ -0.18
RN7SKP259-201ENST00000411066 PEAK1Q9H792 1746 aa13.9□□□□□ -0.18
RN7SKP259-201ENST00000411066 FANCIQ9NVI1 1328 aa13.9□□□□□ -0.19
RN7SKP259-201ENST00000411066 SBNO1A3KN83 1393 aa13.89□□□□□ -0.19
RN7SKP259-201ENST00000411066 HMOX1P09601 288 aa13.88□□□□□ -0.19
RN7SKP259-201ENST00000411066 EIF4A2Q14240 407 aaKnown RBP13.88□□□□□ -0.19
RN7SKP259-201ENST00000411066 PHF8Q9UPP1 1060 aa13.88□□□□□ -0.19
RN7SKP259-201ENST00000411066 FLT4P35916 1363 aa13.87□□□□□ -0.19
RN7SKP259-201ENST00000411066 MS4A1P11836 297 aa13.87□□□□□ -0.19
RN7SKP259-201ENST00000411066 PHACTR3Q96KR7 559 aa13.87□□□□□ -0.19
RN7SKP259-201ENST00000411066 ARHGEF10O15013 1369 aa13.86□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms