RNA–Protein interactions for RNA: ENST00000410628.1

RNU4-43P-201, Transcript of RNA, U4 small nuclear 43, pseudogene, humanhuman

BASIC

Gene RNU4-43P, Length 137 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-43P-201ENST00000410628 PURBQ96QR8 312 aaKnown RBP4.67□□□□□ -1.66
RNU4-43P-201ENST00000410628 CLCN1P35523 988 aa4.66□□□□□ -1.66
RNU4-43P-201ENST00000410628 NNTQ13423 1086 aa4.66□□□□□ -1.66
RNU4-43P-201ENST00000410628 GPAT2Q6NUI2 795 aa4.66□□□□□ -1.66
RNU4-43P-201ENST00000410628 PRR7Q8TB68 274 aa4.66□□□□□ -1.66
RNU4-43P-201ENST00000410628 H3BM21 787 aa4.65□□□□□ -1.67
RNU4-43P-201ENST00000410628 SSTR3P32745 418 aaPredicted RBP4.65□□□□□ -1.67
RNU4-43P-201ENST00000410628 TIMP2P16035 220 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 WDR4P57081 412 aaKnown RBP4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 KCNH2Q12809 1159 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 ARID5BQ14865 1188 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 ZNF511Q8NB15 262 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 FOXJ1Q92949 421 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 IRF7Q92985 503 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 ZFAND3Q9H8U3 227 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 EVA1BQ9NVM1 165 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 PCDHB15Q9Y5E8 787 aa4.64□□□□□ -1.67
RNU4-43P-201ENST00000410628 IGHA1P01876 353 aa4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 CTHP32929 405 aa4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 RASSF7Q02833 373 aa4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 TTLL12Q14166 644 aaPredicted RBP4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 PTPRNQ16849 979 aa4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 C6orf118Q5T5N4 469 aa4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 MRPL14Q6P1L8 145 aaKnown RBP4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 MAP10Q9P2G4 905 aa4.63□□□□□ -1.67
RNU4-43P-201ENST00000410628 CFAP99D6REC4 459 aa4.62□□□□□ -1.67
RNU4-43P-201ENST00000410628 RNF225M0QZC1 329 aaPredicted RBP4.62□□□□□ -1.67
RNU4-43P-201ENST00000410628 NR3C2P08235 984 aa4.62□□□□□ -1.67
RNU4-43P-201ENST00000410628 CSPP1Q1MSJ5 1256 aa4.62□□□□□ -1.67
RNU4-43P-201ENST00000410628 MTMR2Q13614 643 aa4.61□□□□□ -1.67
RNU4-43P-201ENST00000410628 C4orf48Q5BLP8 95 aa4.61□□□□□ -1.67
RNU4-43P-201ENST00000410628 GIGYF2Q6Y7W6 1299 aaKnown RBP4.61□□□□□ -1.67
RNU4-43P-201ENST00000410628 CABLES1Q8TDN4 633 aa4.61□□□□□ -1.67
RNU4-43P-201ENST00000410628 ITPKCQ96DU7 683 aa4.61□□□□□ -1.67
RNU4-43P-201ENST00000410628 BEGAINQ9BUH8 593 aa4.61□□□□□ -1.67
RNU4-43P-201ENST00000410628 KRTAP4-8A0A0G2JLE6 195 aa4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 TULP1O00294 542 aaPredicted RBP4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 PER1O15534 1290 aaPredicted RBP4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 ZIC2O95409 532 aaPredicted RBP4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 ADH1CP00326 375 aa4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 VARSP26640 1264 aaKnown RBP4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 DHX30Q7L2E3 1194 aaKnown RBP eCLIP4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 KLF16Q9BXK1 252 aaPredicted RBP4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 TBC1D2Q9BYX2 928 aa4.6□□□□□ -1.67
RNU4-43P-201ENST00000410628 SCARF1Q14162 830 aa4.59□□□□□ -1.67
RNU4-43P-201ENST00000410628 TSC1Q92574 1164 aa4.59□□□□□ -1.67
RNU4-43P-201ENST00000410628 PLEKHG3A1L390 1219 aa4.58□□□□□ -1.68
RNU4-43P-201ENST00000410628 MAN1A2O60476 641 aa4.58□□□□□ -1.68
RNU4-43P-201ENST00000410628 GSK3AP49840 483 aa4.58□□□□□ -1.68
RNU4-43P-201ENST00000410628 AGERQ15109 404 aa4.58□□□□□ -1.68
RNU4-43P-201ENST00000410628 RSBN1LQ6PCB5 846 aaPredicted RBP4.58□□□□□ -1.68
RNU4-43P-201ENST00000410628 LYPD8Q6UX82 237 aa4.58□□□□□ -1.68
RNU4-43P-201ENST00000410628 F12P00748 615 aaPredicted RBP4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 BMP2P12643 396 aa4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 HRCP23327 699 aa4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 GRM5P41594 1212 aa4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 NPAS3Q8IXF0 933 aa4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 FAM174AQ8TBP5 190 aa4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 KRTAP9-9Q9BYP9 154 aa4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 KRTAP9-4Q9BYQ2 154 aa4.57□□□□□ -1.68
RNU4-43P-201ENST00000410628 PPFIA3O75145 1194 aa4.56□□□□□ -1.68
RNU4-43P-201ENST00000410628 KRT76Q01546 638 aa4.56□□□□□ -1.68
RNU4-43P-201ENST00000410628 QPCTQ16769 361 aa4.56□□□□□ -1.68
RNU4-43P-201ENST00000410628 BARGINQ6ZT62 677 aa4.56□□□□□ -1.68
RNU4-43P-201ENST00000410628 PARP9Q8IXQ6 854 aa4.56□□□□□ -1.68
RNU4-43P-201ENST00000410628 GPR161Q8N6U8 529 aaKnown RBP4.56□□□□□ -1.68
RNU4-43P-201ENST00000410628 DNMT3LQ9UJW3 386 aa4.56□□□□□ -1.68
RNU4-43P-201ENST00000410628 FIGNL2A6NMB9 653 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 ZMYND10O75800 440 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 FSHRP23945 695 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 AMHR2Q16671 573 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 DESI1Q6ICB0 168 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 RIC3Q7Z5B4 369 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 LINC00528Q8N1L1 170 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 ZC3H15Q8WU90 426 aaKnown RBP4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 CDK15Q96Q40 435 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 LIMD1Q9UGP4 676 aa4.55□□□□□ -1.68
RNU4-43P-201ENST00000410628 MAGEB6P1A0A0J9YX57 407 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 SPDYE5A6NIY4 337 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 ADAM23O75077 832 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 VSIG8P0DPA2 414 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 Q8N3U1 123 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 MPNDQ8N594 471 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 CNTNAP3BQ96NU0 1288 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 CARD14Q9BXL6 1004 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 CNTNAP3Q9BZ76 1288 aa4.54□□□□□ -1.68
RNU4-43P-201ENST00000410628 SPTLC1O15269 473 aa4.53□□□□□ -1.68
RNU4-43P-201ENST00000410628 FOXK2Q01167 660 aa4.53□□□□□ -1.68
RNU4-43P-201ENST00000410628 CBLBQ13191 982 aa4.53□□□□□ -1.68
RNU4-43P-201ENST00000410628 MEIOBQ8N635 442 aa4.53□□□□□ -1.68
RNU4-43P-201ENST00000410628 ZBTB3Q9H5J0 574 aa4.53□□□□□ -1.68
RNU4-43P-201ENST00000410628 DNMT3AQ9Y6K1 912 aaPredicted RBP4.53□□□□□ -1.68
RNU4-43P-201ENST00000410628 SOS2Q07890 1332 aaPredicted RBP4.52□□□□□ -1.69
RNU4-43P-201ENST00000410628 NUTM2BA6NNL0 878 aaPredicted RBP4.52□□□□□ -1.69
RNU4-43P-201ENST00000410628 NUTM2EB1AL46 878 aaPredicted RBP4.52□□□□□ -1.69
RNU4-43P-201ENST00000410628 TRIM66O15016 1216 aa4.52□□□□□ -1.69
RNU4-43P-201ENST00000410628 NR5A1Q13285 461 aa4.52□□□□□ -1.69
RNU4-43P-201ENST00000410628 RTL5Q5HYW3 569 aaPredicted RBP4.52□□□□□ -1.69
RNU4-43P-201ENST00000410628 NUTM2DQ5VT03 806 aaPredicted RBP4.52□□□□□ -1.69
RNU4-43P-201ENST00000410628 NUTM2AQ8IVF1 878 aaPredicted RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms