RNA–Protein interactions for RNA: ENST00000410540.1

RN7SKP7-201, Transcript of RNA, 7SK small nuclear pseudogene 7, humanhuman

BASIC

Gene RN7SKP7, Length 285 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SKP7-201ENST00000410540 MTHFSP49914 203 aa12.88□□□□□ -0.35
RN7SKP7-201ENST00000410540 C14orf37Q86TY3 774 aa12.88□□□□□ -0.35
RN7SKP7-201ENST00000410540 NGDNQ8NEJ9 315 aaKnown RBP12.88□□□□□ -0.35
RN7SKP7-201ENST00000410540 AATKQ6ZMQ8 1374 aa12.87□□□□□ -0.35
RN7SKP7-201ENST00000410540 NUTM2FA1L443 756 aa12.87□□□□□ -0.35
RN7SKP7-201ENST00000410540 POTEDQ86YR6 584 aa12.87□□□□□ -0.35
RN7SKP7-201ENST00000410540 COG3Q96JB2 828 aa12.87□□□□□ -0.35
RN7SKP7-201ENST00000410540 STRCP1A6NGW2 1772 aa12.86□□□□□ -0.35
RN7SKP7-201ENST00000410540 TNNT2P45379 298 aaPredicted RBP12.86□□□□□ -0.35
RN7SKP7-201ENST00000410540 ADAMTS8Q9UP79 889 aa12.86□□□□□ -0.35
RN7SKP7-201ENST00000410540 PHF8Q9UPP1 1060 aa12.86□□□□□ -0.35
RN7SKP7-201ENST00000410540 TMEM94Q12767 1356 aa12.85□□□□□ -0.35
RN7SKP7-201ENST00000410540 NME9Q86XW9 330 aa12.85□□□□□ -0.35
RN7SKP7-201ENST00000410540 PMFBP1Q8TBY8 1022 aa12.85□□□□□ -0.35
RN7SKP7-201ENST00000410540 USP31Q70CQ4 1352 aa12.84□□□□□ -0.35
RN7SKP7-201ENST00000410540 PNPLA6Q8IY17 1366 aa12.84□□□□□ -0.35
RN7SKP7-201ENST00000410540 NGEFQ8N5V2 710 aa12.84□□□□□ -0.35
RN7SKP7-201ENST00000410540 RBM33Q96EV2 1170 aaKnown RBP12.84□□□□□ -0.35
RN7SKP7-201ENST00000410540 SMG6Q86US8 1419 aaKnown RBP12.84□□□□□ -0.35
RN7SKP7-201ENST00000410540 OVOS2A0A0J9YW53 1432 aa12.83□□□□□ -0.36
RN7SKP7-201ENST00000410540 OVOS2Q6IE36 1432 aa12.83□□□□□ -0.36
RN7SKP7-201ENST00000410540 ATF3P18847 181 aa12.83□□□□□ -0.36
RN7SKP7-201ENST00000410540 KIF1AQ12756 1690 aa12.83□□□□□ -0.36
RN7SKP7-201ENST00000410540 SHPRHQ149N8 1683 aa12.83□□□□□ -0.36
RN7SKP7-201ENST00000410540 USP54Q70EL1 1684 aa12.83□□□□□ -0.36
RN7SKP7-201ENST00000410540 ESCO1Q5FWF5 840 aa12.82□□□□□ -0.36
RN7SKP7-201ENST00000410540 CADPS2Q86UW7 1296 aa12.82□□□□□ -0.36
RN7SKP7-201ENST00000410540 POLKQ9UBT6 870 aa12.82□□□□□ -0.36
RN7SKP7-201ENST00000410540 NUDCQ9Y266 331 aa12.82□□□□□ -0.36
RN7SKP7-201ENST00000410540 C1orf167Q5SNV9 1468 aa12.82□□□□□ -0.36
RN7SKP7-201ENST00000410540 LRRC7Q96NW7 1537 aa12.82□□□□□ -0.36
RN7SKP7-201ENST00000410540 MSH6P52701 1360 aa12.81□□□□□ -0.36
RN7SKP7-201ENST00000410540 COL3A1P02461 1466 aaPredicted RBP12.81□□□□□ -0.36
RN7SKP7-201ENST00000410540 PDE3BQ13370 1112 aa12.81□□□□□ -0.36
RN7SKP7-201ENST00000410540 CDK12Q9NYV4 1490 aaPredicted RBP12.8□□□□□ -0.36
RN7SKP7-201ENST00000410540 MAP2P11137 1827 aaKnown RBP12.8□□□□□ -0.36
RN7SKP7-201ENST00000410540 MST1RQ04912 1400 aa12.79□□□□□ -0.36
RN7SKP7-201ENST00000410540 PSME1Q06323 249 aa12.79□□□□□ -0.36
RN7SKP7-201ENST00000410540 NCBP3Q53F19 620 aaKnown RBP12.79□□□□□ -0.36
RN7SKP7-201ENST00000410540 ZRANB1Q9UGI0 708 aa12.79□□□□□ -0.36
RN7SKP7-201ENST00000410540 PIK3C2AO00443 1686 aa12.79□□□□□ -0.36
RN7SKP7-201ENST00000410540 XIRP1Q702N8 1843 aaKnown RBP12.78□□□□□ -0.36
RN7SKP7-201ENST00000410540 DIAPH1O60610 1272 aaKnown RBP12.78□□□□□ -0.36
RN7SKP7-201ENST00000410540 PNNQ9H307 717 aaKnown RBP12.78□□□□□ -0.36
RN7SKP7-201ENST00000410540 RUNDC1Q96C34 613 aa12.77□□□□□ -0.37
RN7SKP7-201ENST00000410540 ORAI2Q96SN7 254 aa12.77□□□□□ -0.37
RN7SKP7-201ENST00000410540 ZNF335Q9H4Z2 1342 aaPredicted RBP12.77□□□□□ -0.37
RN7SKP7-201ENST00000410540 KIF24Q5T7B8 1368 aa12.77□□□□□ -0.37
RN7SKP7-201ENST00000410540 NLRP6P59044 892 aa12.76□□□□□ -0.37
RN7SKP7-201ENST00000410540 ABTB2Q8N961 1025 aa12.76□□□□□ -0.37
RN7SKP7-201ENST00000410540 U2AF1L5P0DN76 240 aaPredicted RBP12.75□□□□□ -0.37
RN7SKP7-201ENST00000410540 U2AF1Q01081 240 aaKnown RBP eCLIP12.75□□□□□ -0.37
RN7SKP7-201ENST00000410540 FOXO3O43524 673 aa12.74□□□□□ -0.37
RN7SKP7-201ENST00000410540 PAK3O75914 559 aaPredicted RBP12.74□□□□□ -0.37
RN7SKP7-201ENST00000410540 EMILIN1Q9Y6C2 1016 aa12.74□□□□□ -0.37
RN7SKP7-201ENST00000410540 TRPM3Q9HCF6 1732 aaPredicted RBP12.74□□□□□ -0.37
RN7SKP7-201ENST00000410540 MARF1Q9Y4F3 1742 aaKnown RBP12.74□□□□□ -0.37
RN7SKP7-201ENST00000410540 ZNF521Q96K83 1311 aa12.73□□□□□ -0.37
RN7SKP7-201ENST00000410540 PPM1GO15355 546 aaPredicted RBP12.73□□□□□ -0.37
RN7SKP7-201ENST00000410540 FCHSD2O94868 740 aa12.73□□□□□ -0.37
RN7SKP7-201ENST00000410540 IL13P35225 146 aa12.73□□□□□ -0.37
RN7SKP7-201ENST00000410540 KRT28Q7Z3Y7 464 aa12.73□□□□□ -0.37
RN7SKP7-201ENST00000410540 SBNO1A3KN83 1393 aa12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 NPHP3Q7Z494 1330 aa12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 APAF1O14727 1248 aa12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 U2SURPO15042 1029 aaKnown RBP12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 FBLN1P23142 703 aa12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 RRS1Q15050 365 aaKnown RBP12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 CCDC146Q8IYE0 955 aa12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 KCNH5Q8NCM2 988 aa12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 IQSEC2Q5JU85 1478 aa12.72□□□□□ -0.37
RN7SKP7-201ENST00000410540 FLT4P35916 1363 aa12.71□□□□□ -0.37
RN7SKP7-201ENST00000410540 CCDC27Q2M243 656 aa12.71□□□□□ -0.37
RN7SKP7-201ENST00000410540 PLEKHF1Q96S99 279 aa12.71□□□□□ -0.37
RN7SKP7-201ENST00000410540 GTF3C3Q9Y5Q9 886 aa12.71□□□□□ -0.37
RN7SKP7-201ENST00000410540 RTL1A6NKG5 1358 aa12.7□□□□□ -0.38
RN7SKP7-201ENST00000410540 MAP3K19Q56UN5 1328 aa12.7□□□□□ -0.38
RN7SKP7-201ENST00000410540 TCP11L2Q8N4U5 519 aa12.7□□□□□ -0.38
RN7SKP7-201ENST00000410540 SLAIN2Q9P270 581 aa12.7□□□□□ -0.38
RN7SKP7-201ENST00000410540 PEAK1Q9H792 1746 aa12.7□□□□□ -0.38
RN7SKP7-201ENST00000410540 USP19O94966 1318 aa12.69□□□□□ -0.38
RN7SKP7-201ENST00000410540 SLIT3O75094 1523 aa12.69□□□□□ -0.38
RN7SKP7-201ENST00000410540 GOLGA2Q08379 1002 aa12.69□□□□□ -0.38
RN7SKP7-201ENST00000410540 PHF23Q9BUL5 403 aaPredicted RBP12.69□□□□□ -0.38
RN7SKP7-201ENST00000410540 ALS2Q96Q42 1657 aa12.69□□□□□ -0.38
RN7SKP7-201ENST00000410540 PHRF1Q9P1Y6 1649 aaKnown RBP12.69□□□□□ -0.38
RN7SKP7-201ENST00000410540 NFAT5O94916 1531 aa12.68□□□□□ -0.38
RN7SKP7-201ENST00000410540 MAPK8IP3Q9UPT6 1336 aa12.68□□□□□ -0.38
RN7SKP7-201ENST00000410540 NEFMP07197 916 aa12.68□□□□□ -0.38
RN7SKP7-201ENST00000410540 AMPHP49418 695 aa12.68□□□□□ -0.38
RN7SKP7-201ENST00000410540 RSPH6AQ9H0K4 717 aa12.68□□□□□ -0.38
RN7SKP7-201ENST00000410540 SALL2Q9Y467 1007 aaPredicted RBP12.68□□□□□ -0.38
RN7SKP7-201ENST00000410540 PXDNQ92626 1479 aa12.67□□□□□ -0.38
RN7SKP7-201ENST00000410540 EIF4A2Q14240 407 aaKnown RBP12.67□□□□□ -0.38
RN7SKP7-201ENST00000410540 NUTM2GQ5VZR2 741 aa12.67□□□□□ -0.38
RN7SKP7-201ENST00000410540 BRINP3Q76B58 766 aa12.67□□□□□ -0.38
RN7SKP7-201ENST00000410540 WDR63Q8IWG1 891 aa12.67□□□□□ -0.38
RN7SKP7-201ENST00000410540 RGPD1P0DJD0 1748 aa12.66□□□□□ -0.38
RN7SKP7-201ENST00000410540 HOXC9P31274 260 aa12.66□□□□□ -0.38
RN7SKP7-201ENST00000410540 HSP90AB2PQ58FF8 381 aa12.66□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms