RNA–Protein interactions for RNA: ENST00000409946.5

LRPPRC-203, Transcript of leucine rich pentatricopeptide repeat containing, humanhuman

TSL 1 (best) BASIC

Gene LRPPRC, Length 1,848 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRPPRC-203ENST00000409946 PMFBP1Q8TBY8 1022 aa23.39■■□□□ 1.33
LRPPRC-203ENST00000409946 FBLN1P23142 703 aa23.38■■□□□ 1.33
LRPPRC-203ENST00000409946 ZNF692Q9BU19 519 aaPredicted RBP23.38■■□□□ 1.33
LRPPRC-203ENST00000409946 USP6P35125 1406 aa23.37■■□□□ 1.33
LRPPRC-203ENST00000409946 CFAP53Q96M91 514 aa23.37■■□□□ 1.33
LRPPRC-203ENST00000409946 COL3A1P02461 1466 aaPredicted RBP23.36■■□□□ 1.33
LRPPRC-203ENST00000409946 ANKARQ7Z5J8 1434 aa23.36■■□□□ 1.33
LRPPRC-203ENST00000409946 STRCP1A6NGW2 1772 aa23.36■■□□□ 1.33
LRPPRC-203ENST00000409946 NUDCQ9Y266 331 aa23.36■■□□□ 1.33
LRPPRC-203ENST00000409946 ADGRL3Q9HAR2 1447 aa23.35■■□□□ 1.33
LRPPRC-203ENST00000409946 TTC21BQ7Z4L5 1316 aa23.34■■□□□ 1.33
LRPPRC-203ENST00000409946 LMTK3Q96Q04 1460 aa23.32■■□□□ 1.32
LRPPRC-203ENST00000409946 FKBP8Q14318 412 aa23.32■■□□□ 1.32
LRPPRC-203ENST00000409946 SSH2Q76I76 1423 aa23.31■■□□□ 1.32
LRPPRC-203ENST00000409946 NGDNQ8NEJ9 315 aaKnown RBP23.31■■□□□ 1.32
LRPPRC-203ENST00000409946 CDCA7LQ96GN5 454 aa23.31■■□□□ 1.32
LRPPRC-203ENST00000409946 COG3Q96JB2 828 aa23.31■■□□□ 1.32
LRPPRC-203ENST00000409946 STRCQ7RTU9 1775 aa23.3■■□□□ 1.32
LRPPRC-203ENST00000409946 APAF1O14727 1248 aa23.29■■□□□ 1.32
LRPPRC-203ENST00000409946 POLKQ9UBT6 870 aa23.29■■□□□ 1.32
LRPPRC-203ENST00000409946 C14orf37Q86TY3 774 aa23.29■■□□□ 1.32
LRPPRC-203ENST00000409946 NEFLP07196 543 aa23.28■■□□□ 1.32
LRPPRC-203ENST00000409946 PIK3C2AO00443 1686 aa23.28■■□□□ 1.32
LRPPRC-203ENST00000409946 OVOS2A0A0J9YW53 1432 aa23.27■■□□□ 1.32
LRPPRC-203ENST00000409946 OVOS2Q6IE36 1432 aa23.27■■□□□ 1.32
LRPPRC-203ENST00000409946 PPM1GO15355 546 aaPredicted RBP23.27■■□□□ 1.32
LRPPRC-203ENST00000409946 EMILIN1Q9Y6C2 1016 aa23.27■■□□□ 1.32
LRPPRC-203ENST00000409946 PNPLA6Q8IY17 1366 aa23.26■■□□□ 1.31
LRPPRC-203ENST00000409946 U2AF1L5P0DN76 240 aaPredicted RBP23.26■■□□□ 1.31
LRPPRC-203ENST00000409946 U2AF1Q01081 240 aaKnown RBP eCLIP23.26■■□□□ 1.31
LRPPRC-203ENST00000409946 PROSER2Q86WR7 435 aaPredicted RBP23.26■■□□□ 1.31
LRPPRC-203ENST00000409946 IRX6P78412 446 aaPredicted RBP23.25■■□□□ 1.31
LRPPRC-203ENST00000409946 PDE3BQ13370 1112 aa23.25■■□□□ 1.31
LRPPRC-203ENST00000409946 IQSEC2Q5JU85 1478 aa23.25■■□□□ 1.31
LRPPRC-203ENST00000409946 U2SURPO15042 1029 aaKnown RBP23.24■■□□□ 1.31
LRPPRC-203ENST00000409946 AATKQ6ZMQ8 1374 aa23.24■■□□□ 1.31
LRPPRC-203ENST00000409946 MARF1Q9Y4F3 1742 aaKnown RBP23.24■■□□□ 1.31
LRPPRC-203ENST00000409946 RRS1Q15050 365 aaKnown RBP23.24■■□□□ 1.31
LRPPRC-203ENST00000409946 ZNF521Q96K83 1311 aa23.23■■□□□ 1.31
LRPPRC-203ENST00000409946 RUNDC1Q96C34 613 aa23.22■■□□□ 1.31
LRPPRC-203ENST00000409946 TTC21AQ8NDW8 1320 aa23.22■■□□□ 1.31
LRPPRC-203ENST00000409946 CDK12Q9NYV4 1490 aaPredicted RBP23.22■■□□□ 1.31
LRPPRC-203ENST00000409946 DIAPH1O60610 1272 aaKnown RBP23.22■■□□□ 1.31
LRPPRC-203ENST00000409946 PHF8Q9UPP1 1060 aa23.22■■□□□ 1.31
LRPPRC-203ENST00000409946 PEAK1Q9H792 1746 aa23.21■■□□□ 1.31
LRPPRC-203ENST00000409946 RRP7AQ9Y3A4 280 aaKnown RBP23.19■■□□□ 1.3
LRPPRC-203ENST00000409946 ESCO1Q5FWF5 840 aa23.19■■□□□ 1.3
LRPPRC-203ENST00000409946 SOX12O15370 315 aa23.18■■□□□ 1.3
LRPPRC-203ENST00000409946 TCP11L2Q8N4U5 519 aa23.18■■□□□ 1.3
LRPPRC-203ENST00000409946 XIRP1Q702N8 1843 aaKnown RBP23.17■■□□□ 1.3
LRPPRC-203ENST00000409946 NEUROD2Q15784 382 aa23.17■■□□□ 1.3
LRPPRC-203ENST00000409946 TMEM94Q12767 1356 aa23.17■■□□□ 1.3
LRPPRC-203ENST00000409946 USP31Q70CQ4 1352 aa23.17■■□□□ 1.3
LRPPRC-203ENST00000409946 USP54Q70EL1 1684 aa23.16■■□□□ 1.3
LRPPRC-203ENST00000409946 LRRC7Q96NW7 1537 aa23.16■■□□□ 1.3
LRPPRC-203ENST00000409946 GOLGA2Q08379 1002 aa23.15■■□□□ 1.3
LRPPRC-203ENST00000409946 ORAI2Q96SN7 254 aa23.15■■□□□ 1.3
LRPPRC-203ENST00000409946 DMRT2Q9Y5R5 561 aa23.15■■□□□ 1.3
LRPPRC-203ENST00000409946 NUTM2GQ5VZR2 741 aa23.15■■□□□ 1.3
LRPPRC-203ENST00000409946 PAK3O75914 559 aaPredicted RBP23.14■■□□□ 1.29
LRPPRC-203ENST00000409946 PLEKHF1Q96S99 279 aa23.14■■□□□ 1.29
LRPPRC-203ENST00000409946 SPINK5Q9NQ38 1064 aaPredicted RBP23.13■■□□□ 1.29
LRPPRC-203ENST00000409946 IL13P35225 146 aa23.12■■□□□ 1.29
LRPPRC-203ENST00000409946 NLRP6P59044 892 aa23.12■■□□□ 1.29
LRPPRC-203ENST00000409946 DUSP27Q5VZP5 1158 aa23.12■■□□□ 1.29
LRPPRC-203ENST00000409946 C19orf44Q9H6X5 657 aa23.12■■□□□ 1.29
LRPPRC-203ENST00000409946 C1orf167Q5SNV9 1468 aa23.11■■□□□ 1.29
LRPPRC-203ENST00000409946 WWC1Q8IX03 1113 aa23.11■■□□□ 1.29
LRPPRC-203ENST00000409946 SLFN5Q08AF3 891 aa23.1■■□□□ 1.29
LRPPRC-203ENST00000409946 RCAN3Q9UKA8 241 aa23.1■■□□□ 1.29
LRPPRC-203ENST00000409946 KIF1AQ12756 1690 aa23.1■■□□□ 1.29
LRPPRC-203ENST00000409946 RNF123Q5XPI4 1314 aa23.1■■□□□ 1.29
LRPPRC-203ENST00000409946 NGEFQ8N5V2 710 aa23.1■■□□□ 1.29
LRPPRC-203ENST00000409946 ABTB2Q8N961 1025 aa23.1■■□□□ 1.29
LRPPRC-203ENST00000409946 HMOX1P09601 288 aa23.09■■□□□ 1.29
LRPPRC-203ENST00000409946 XPCQ01831 940 aaPredicted RBP23.08■■□□□ 1.29
LRPPRC-203ENST00000409946 PSME1Q06323 249 aa23.08■■□□□ 1.29
LRPPRC-203ENST00000409946 MAP3K19Q56UN5 1328 aa23.08■■□□□ 1.29
LRPPRC-203ENST00000409946 TRPM3Q9HCF6 1732 aaPredicted RBP23.08■■□□□ 1.28
LRPPRC-203ENST00000409946 RSPH6AQ9H0K4 717 aa23.08■■□□□ 1.28
LRPPRC-203ENST00000409946 MAPK8IP3Q9UPT6 1336 aa23.07■■□□□ 1.28
LRPPRC-203ENST00000409946 MST1RQ04912 1400 aa23.07■■□□□ 1.28
LRPPRC-203ENST00000409946 FOXO3O43524 673 aa23.07■■□□□ 1.28
LRPPRC-203ENST00000409946 PHF23Q9BUL5 403 aaPredicted RBP23.07■■□□□ 1.28
LRPPRC-203ENST00000409946 LTN1O94822 1766 aa23.06■■□□□ 1.28
LRPPRC-203ENST00000409946 PRKAR2BP31323 418 aa23.06■■□□□ 1.28
LRPPRC-203ENST00000409946 HSP90AB2PQ58FF8 381 aa23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 TRMT2AQ8IZ69 625 aaKnown RBP23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 ZNF335Q9H4Z2 1342 aaPredicted RBP23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 RGPD1P0DJD0 1748 aa23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 FCHSD2O94868 740 aa23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 ATF3P18847 181 aa23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 TMPOP42166 694 aaKnown RBP23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 EIF4A2Q14240 407 aaKnown RBP23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 NCOA3Q9Y6Q9 1424 aa23.05■■□□□ 1.28
LRPPRC-203ENST00000409946 DCCP43146 1447 aa23.04■■□□□ 1.28
LRPPRC-203ENST00000409946 E9PSI1 815 aa23.03■■□□□ 1.28
LRPPRC-203ENST00000409946 DLG5Q8TDM6 1919 aa23.03■■□□□ 1.28
LRPPRC-203ENST00000409946 CCDC27Q2M243 656 aa23.03■■□□□ 1.28
LRPPRC-203ENST00000409946 ERICH6BQ5W0A0 696 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms