RNA–Protein interactions for RNA: ENST00000409884.5

LRRTM4-204, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LRRTM4, Length 2,227 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-204ENST00000409884 HDGFL2Q7Z4V5 671 aaPredicted RBP14.23□□□□□ -0.13
LRRTM4-204ENST00000409884 CCDC61Q9Y6R9 512 aa14.23□□□□□ -0.13
LRRTM4-204ENST00000409884 NINLQ9Y2I6 1382 aa14.22□□□□□ -0.13
LRRTM4-204ENST00000409884 ZRANB1Q9UGI0 708 aa14.22□□□□□ -0.13
LRRTM4-204ENST00000409884 ADAMTS8Q9UP79 889 aa14.22□□□□□ -0.13
LRRTM4-204ENST00000409884 PTCH1Q13635 1447 aa14.22□□□□□ -0.13
LRRTM4-204ENST00000409884 PMFBP1Q8TBY8 1022 aa14.21□□□□□ -0.14
LRRTM4-204ENST00000409884 CHD2O14647 1828 aaKnown RBP14.2□□□□□ -0.14
LRRTM4-204ENST00000409884 USP32Q8NFA0 1604 aa14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 MTHFSP49914 203 aa14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 NME9Q86XW9 330 aa14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 RGPD8O14715 1765 aaPredicted RBP14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 CPSF1Q10570 1443 aaKnown RBP14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 ADGRB2O60241 1585 aa14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 ZBED9Q6R2W3 1325 aa14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 NKTRP30414 1462 aaKnown RBP14.19□□□□□ -0.14
LRRTM4-204ENST00000409884 ACEP12821 1306 aa14.18□□□□□ -0.14
LRRTM4-204ENST00000409884 PIK3R4Q99570 1358 aa14.17□□□□□ -0.14
LRRTM4-204ENST00000409884 CCDC146Q8IYE0 955 aa14.17□□□□□ -0.14
LRRTM4-204ENST00000409884 RSPH6AQ9H0K4 717 aa14.17□□□□□ -0.14
LRRTM4-204ENST00000409884 CDC42BPGQ6DT37 1551 aa14.16□□□□□ -0.14
LRRTM4-204ENST00000409884 WDR43Q15061 677 aaKnown RBP eCLIP14.16□□□□□ -0.14
LRRTM4-204ENST00000409884 NALCNQ8IZF0 1738 aa14.15□□□□□ -0.14
LRRTM4-204ENST00000409884 NSD2O96028 1365 aa14.14□□□□□ -0.15
LRRTM4-204ENST00000409884 C14orf37Q86TY3 774 aa14.14□□□□□ -0.15
LRRTM4-204ENST00000409884 TOPAZ1Q8N9V7 1692 aa14.13□□□□□ -0.15
LRRTM4-204ENST00000409884 KIF20BQ96Q89 1820 aa14.13□□□□□ -0.15
LRRTM4-204ENST00000409884 EDC4Q6P2E9 1401 aaKnown RBP14.13□□□□□ -0.15
LRRTM4-204ENST00000409884 PLEKHG3A1L390 1219 aa14.13□□□□□ -0.15
LRRTM4-204ENST00000409884 PPM1GO15355 546 aaPredicted RBP14.13□□□□□ -0.15
LRRTM4-204ENST00000409884 BLMP54132 1417 aaPredicted RBP14.13□□□□□ -0.15
LRRTM4-204ENST00000409884 AKAP12Q02952 1782 aa14.12□□□□□ -0.15
LRRTM4-204ENST00000409884 LMTK3Q96Q04 1460 aa14.12□□□□□ -0.15
LRRTM4-204ENST00000409884 ITSN1Q15811 1721 aa14.12□□□□□ -0.15
LRRTM4-204ENST00000409884 POLR3AO14802 1390 aaPredicted RBP14.12□□□□□ -0.15
LRRTM4-204ENST00000409884 MON2Q7Z3U7 1717 aa14.12□□□□□ -0.15
LRRTM4-204ENST00000409884 PROSER2Q86WR7 435 aaPredicted RBP14.11□□□□□ -0.15
LRRTM4-204ENST00000409884 NGDNQ8NEJ9 315 aaKnown RBP14.11□□□□□ -0.15
LRRTM4-204ENST00000409884 ANKRD26Q9UPS8 1709 aa14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 SOX12O15370 315 aa14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 CDCA7LQ96GN5 454 aa14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 SHPRHQ149N8 1683 aa14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 TTC21BQ7Z4L5 1316 aa14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 RRS1Q15050 365 aaKnown RBP14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 ZNF692Q9BU19 519 aaPredicted RBP14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 EMILIN1Q9Y6C2 1016 aa14.1□□□□□ -0.15
LRRTM4-204ENST00000409884 USP6P35125 1406 aa14.09□□□□□ -0.15
LRRTM4-204ENST00000409884 POLKQ9UBT6 870 aa14.09□□□□□ -0.15
LRRTM4-204ENST00000409884 STRCP1A6NGW2 1772 aa14.09□□□□□ -0.15
LRRTM4-204ENST00000409884 FMN2Q9NZ56 1722 aa14.09□□□□□ -0.15
LRRTM4-204ENST00000409884 APAF1O14727 1248 aa14.09□□□□□ -0.15
LRRTM4-204ENST00000409884 NUTM2GQ5VZR2 741 aa14.09□□□□□ -0.15
LRRTM4-204ENST00000409884 IRX6P78412 446 aaPredicted RBP14.08□□□□□ -0.16
LRRTM4-204ENST00000409884 NBR1Q14596 966 aa14.08□□□□□ -0.16
LRRTM4-204ENST00000409884 ADGRL3Q9HAR2 1447 aa14.08□□□□□ -0.16
LRRTM4-204ENST00000409884 COG3Q96JB2 828 aa14.07□□□□□ -0.16
LRRTM4-204ENST00000409884 ORAI2Q96SN7 254 aa14.07□□□□□ -0.16
LRRTM4-204ENST00000409884 NRKQ7Z2Y5 1582 aa14.07□□□□□ -0.16
LRRTM4-204ENST00000409884 ESCO1Q5FWF5 840 aa14.07□□□□□ -0.16
LRRTM4-204ENST00000409884 MAP2P11137 1827 aaKnown RBP14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 U2SURPO15042 1029 aaKnown RBP14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 XPCQ01831 940 aaPredicted RBP14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 CFAP53Q96M91 514 aa14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 STRCQ7RTU9 1775 aa14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 U2AF1L5P0DN76 240 aaPredicted RBP14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 U2AF1Q01081 240 aaKnown RBP eCLIP14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 RRP7AQ9Y3A4 280 aaKnown RBP14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 NWD1Q149M9 1564 aa14.06□□□□□ -0.16
LRRTM4-204ENST00000409884 SSH2Q76I76 1423 aa14.05□□□□□ -0.16
LRRTM4-204ENST00000409884 PAK3O75914 559 aaPredicted RBP14.05□□□□□ -0.16
LRRTM4-204ENST00000409884 FKBP8Q14318 412 aa14.05□□□□□ -0.16
LRRTM4-204ENST00000409884 NEUROD2Q15784 382 aa14.05□□□□□ -0.16
LRRTM4-204ENST00000409884 PHF8Q9UPP1 1060 aa14.05□□□□□ -0.16
LRRTM4-204ENST00000409884 TMEM94Q12767 1356 aa14.04□□□□□ -0.16
LRRTM4-204ENST00000409884 ANKARQ7Z5J8 1434 aa14.04□□□□□ -0.16
LRRTM4-204ENST00000409884 COL3A1P02461 1466 aaPredicted RBP14.04□□□□□ -0.16
LRRTM4-204ENST00000409884 NUDCQ9Y266 331 aa14.03□□□□□ -0.16
LRRTM4-204ENST00000409884 DMRT2Q9Y5R5 561 aa14.03□□□□□ -0.16
LRRTM4-204ENST00000409884 FOXO3O43524 673 aa14.03□□□□□ -0.16
LRRTM4-204ENST00000409884 RTL5Q5HYW3 569 aaPredicted RBP14.03□□□□□ -0.16
LRRTM4-204ENST00000409884 SMG6Q86US8 1419 aaKnown RBP14.02□□□□□ -0.16
LRRTM4-204ENST00000409884 ZNF335Q9H4Z2 1342 aaPredicted RBP14.02□□□□□ -0.16
LRRTM4-204ENST00000409884 OVOS2A0A0J9YW53 1432 aa14.02□□□□□ -0.17
LRRTM4-204ENST00000409884 OVOS2Q6IE36 1432 aa14.02□□□□□ -0.17
LRRTM4-204ENST00000409884 INSRP06213 1382 aa14.02□□□□□ -0.17
LRRTM4-204ENST00000409884 PNPLA6Q8IY17 1366 aa14.01□□□□□ -0.17
LRRTM4-204ENST00000409884 DDX17Q92841 729 aaKnown RBP14.01□□□□□ -0.17
LRRTM4-204ENST00000409884 SPINK5Q9NQ38 1064 aaPredicted RBP14.01□□□□□ -0.17
LRRTM4-204ENST00000409884 DIAPH1O60610 1272 aaKnown RBP14□□□□□ -0.17
LRRTM4-204ENST00000409884 C19orf44Q9H6X5 657 aa14□□□□□ -0.17
LRRTM4-204ENST00000409884 PIK3C2AO00443 1686 aa14□□□□□ -0.17
LRRTM4-204ENST00000409884 NLRP6P59044 892 aa14□□□□□ -0.17
LRRTM4-204ENST00000409884 TCP11L2Q8N4U5 519 aa14□□□□□ -0.17
LRRTM4-204ENST00000409884 HMOX1P09601 288 aa13.99□□□□□ -0.17
LRRTM4-204ENST00000409884 ABTB2Q8N961 1025 aa13.99□□□□□ -0.17
LRRTM4-204ENST00000409884 ZNF521Q96K83 1311 aa13.99□□□□□ -0.17
LRRTM4-204ENST00000409884 PSME1Q06323 249 aa13.99□□□□□ -0.17
LRRTM4-204ENST00000409884 PAXIP1Q6ZW49 1069 aaPredicted RBP13.98□□□□□ -0.17
LRRTM4-204ENST00000409884 HOMEZQ8IX15 550 aa13.98□□□□□ -0.17
LRRTM4-204ENST00000409884 RUNDC1Q96C34 613 aa13.98□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 130.7 ms