RNA–Protein interactions for RNA: ENST00000409857.7

GCFC2-202, Transcript of GC-rich sequence DNA-binding factor 2, humanhuman

TSL 5 BASIC

Gene GCFC2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GCFC2-202ENST00000409857 NGDNQ8NEJ9 315 aaKnown RBP22.84■■□□□ 1.25
GCFC2-202ENST00000409857 FBXO41Q8TF61 875 aa22.84■■□□□ 1.25
GCFC2-202ENST00000409857 ZNF692Q9BU19 519 aaPredicted RBP22.84■■□□□ 1.25
GCFC2-202ENST00000409857 NRKQ7Z2Y5 1582 aa22.83■■□□□ 1.25
GCFC2-202ENST00000409857 TERF2IPQ9NYB0 399 aa22.83■■□□□ 1.25
GCFC2-202ENST00000409857 BCL11AQ9H165 835 aa22.83■■□□□ 1.25
GCFC2-202ENST00000409857 FOXO3O43524 673 aa22.82■■□□□ 1.24
GCFC2-202ENST00000409857 COL16A1Q07092 1604 aaPredicted RBP22.82■■□□□ 1.24
GCFC2-202ENST00000409857 SOS2Q07890 1332 aaPredicted RBP22.82■■□□□ 1.24
GCFC2-202ENST00000409857 POLR3GLQ9BT43 218 aa22.81■■□□□ 1.24
GCFC2-202ENST00000409857 USP6P35125 1406 aa22.81■■□□□ 1.24
GCFC2-202ENST00000409857 HDGFL2Q7Z4V5 671 aaPredicted RBP22.81■■□□□ 1.24
GCFC2-202ENST00000409857 A0A1W2PP64 1363 aa22.81■■□□□ 1.24
GCFC2-202ENST00000409857 PSME1Q06323 249 aa22.8■■□□□ 1.24
GCFC2-202ENST00000409857 SSH2Q76I76 1423 aa22.79■■□□□ 1.24
GCFC2-202ENST00000409857 SBNO1A3KN83 1393 aa22.79■■□□□ 1.24
GCFC2-202ENST00000409857 KTN1Q86UP2 1357 aaKnown RBP22.79■■□□□ 1.24
GCFC2-202ENST00000409857 KRT28Q7Z3Y7 464 aa22.78■■□□□ 1.24
GCFC2-202ENST00000409857 ALS2Q96Q42 1657 aa22.78■■□□□ 1.24
GCFC2-202ENST00000409857 EDC4Q6P2E9 1401 aaKnown RBP22.77■■□□□ 1.24
GCFC2-202ENST00000409857 MSH5O43196 834 aa22.76■■□□□ 1.23
GCFC2-202ENST00000409857 DDX17Q92841 729 aaKnown RBP22.76■■□□□ 1.23
GCFC2-202ENST00000409857 TNS3Q68CZ2 1445 aa22.73■■□□□ 1.23
GCFC2-202ENST00000409857 PANK3Q9H999 370 aa22.73■■□□□ 1.23
GCFC2-202ENST00000409857 USP54Q70EL1 1684 aa22.73■■□□□ 1.23
GCFC2-202ENST00000409857 TTC21AQ8NDW8 1320 aa22.73■■□□□ 1.23
GCFC2-202ENST00000409857 SHPRHQ149N8 1683 aa22.72■■□□□ 1.23
GCFC2-202ENST00000409857 KIF20BQ96Q89 1820 aa22.72■■□□□ 1.23
GCFC2-202ENST00000409857 XPCQ01831 940 aaPredicted RBP22.72■■□□□ 1.23
GCFC2-202ENST00000409857 LRRC59Q96AG4 307 aaKnown RBP22.72■■□□□ 1.23
GCFC2-202ENST00000409857 SPATA31A3Q5VYP0 1347 aa22.72■■□□□ 1.23
GCFC2-202ENST00000409857 COL22A1Q8NFW1 1626 aaPredicted RBP22.71■■□□□ 1.23
GCFC2-202ENST00000409857 FAM9BQ8IZU0 186 aa22.71■■□□□ 1.23
GCFC2-202ENST00000409857 PIK3C2AO00443 1686 aa22.71■■□□□ 1.23
GCFC2-202ENST00000409857 CARD14Q9BXL6 1004 aa22.71■■□□□ 1.23
GCFC2-202ENST00000409857 TTC21BQ7Z4L5 1316 aa22.71■■□□□ 1.23
GCFC2-202ENST00000409857 HSPA1LP34931 641 aa22.7■■□□□ 1.22
GCFC2-202ENST00000409857 ARHGEF10O15013 1369 aa22.7■■□□□ 1.22
GCFC2-202ENST00000409857 NSD3Q9BZ95 1437 aa22.69■■□□□ 1.22
GCFC2-202ENST00000409857 PRKRIP1Q9H875 184 aaPredicted RBP22.69■■□□□ 1.22
GCFC2-202ENST00000409857 MED1Q15648 1581 aaPredicted RBP22.68■■□□□ 1.22
GCFC2-202ENST00000409857 MARF1Q9Y4F3 1742 aaKnown RBP22.67■■□□□ 1.22
GCFC2-202ENST00000409857 CRYBG1Q9Y4K1 1723 aa22.67■■□□□ 1.22
GCFC2-202ENST00000409857 PAK3O75914 559 aaPredicted RBP22.66■■□□□ 1.22
GCFC2-202ENST00000409857 ANKRD26Q9UPS8 1709 aa22.66■■□□□ 1.22
GCFC2-202ENST00000409857 MRS2Q9HD23 443 aa22.65■■□□□ 1.22
GCFC2-202ENST00000409857 JCADQ9P266 1359 aa22.65■■□□□ 1.22
GCFC2-202ENST00000409857 PER1O15534 1290 aaPredicted RBP22.65■■□□□ 1.22
GCFC2-202ENST00000409857 USP31Q70CQ4 1352 aa22.64■■□□□ 1.22
GCFC2-202ENST00000409857 PNPLA6Q8IY17 1366 aa22.64■■□□□ 1.22
GCFC2-202ENST00000409857 ABCA3Q99758 1704 aa22.64■■□□□ 1.21
GCFC2-202ENST00000409857 CGNL1Q0VF96 1302 aa22.63■■□□□ 1.21
GCFC2-202ENST00000409857 ABTB2Q8N961 1025 aa22.63■■□□□ 1.21
GCFC2-202ENST00000409857 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.63■■□□□ 1.211e-6■■□□□ 13.3
GCFC2-202ENST00000409857 KNSTRNQ9Y448 316 aa22.63■■□□□ 1.21
GCFC2-202ENST00000409857 NSD2O96028 1365 aa22.62■■□□□ 1.21
GCFC2-202ENST00000409857 PHRF1Q9P1Y6 1649 aaKnown RBP22.61■■□□□ 1.21
GCFC2-202ENST00000409857 NPC1L1Q9UHC9 1359 aa22.61■■□□□ 1.21
GCFC2-202ENST00000409857 OVOS2A0A0J9YW53 1432 aa22.6■■□□□ 1.21
GCFC2-202ENST00000409857 OVOS2Q6IE36 1432 aa22.6■■□□□ 1.21
GCFC2-202ENST00000409857 SLIT3O75094 1523 aa22.6■■□□□ 1.21
GCFC2-202ENST00000409857 FYB1O15117 783 aa22.6■■□□□ 1.21
GCFC2-202ENST00000409857 PPP4R2Q9NY27 417 aa22.6■■□□□ 1.21
GCFC2-202ENST00000409857 NLRP13Q86W25 1043 aa22.59■■□□□ 1.21
GCFC2-202ENST00000409857 NME9Q86XW9 330 aa22.59■■□□□ 1.21
GCFC2-202ENST00000409857 USP19O94966 1318 aa22.59■■□□□ 1.21
GCFC2-202ENST00000409857 LMOD2Q6P5Q4 547 aa22.58■■□□□ 1.21
GCFC2-202ENST00000409857 FANCIQ9NVI1 1328 aa22.58■■□□□ 1.21
GCFC2-202ENST00000409857 NLRP6P59044 892 aa22.57■■□□□ 1.2
GCFC2-202ENST00000409857 AMER1Q5JTC6 1135 aaPredicted RBP22.57■■□□□ 1.2
GCFC2-202ENST00000409857 CNGB1Q14028 1251 aaPredicted RBP22.57■■□□□ 1.2
GCFC2-202ENST00000409857 B4GALNT3Q6L9W6 998 aa22.57■■□□□ 1.2
GCFC2-202ENST00000409857 SPATA31A6Q5VVP1 1343 aa22.57■■□□□ 1.2
GCFC2-202ENST00000409857 ZBED9Q6R2W3 1325 aa22.55■■□□□ 1.2
GCFC2-202ENST00000409857 ERICH6BQ5W0A0 696 aa22.54■■□□□ 1.2
GCFC2-202ENST00000409857 COG3Q96JB2 828 aa22.54■■□□□ 1.2
GCFC2-202ENST00000409857 NUTM2GQ5VZR2 741 aa22.53■■□□□ 1.2
GCFC2-202ENST00000409857 GGNBP2Q9H3C7 697 aa22.53■■□□□ 1.2
GCFC2-202ENST00000409857 ZRANB1Q9UGI0 708 aa22.53■■□□□ 1.2
GCFC2-202ENST00000409857 NFAT5O94916 1531 aa22.52■■□□□ 1.2
GCFC2-202ENST00000409857 ILDR1Q86SU0 546 aaPredicted RBP22.51■■□□□ 1.19
GCFC2-202ENST00000409857 KCNH5Q8NCM2 988 aa22.51■■□□□ 1.19
GCFC2-202ENST00000409857 GCP02774 474 aa22.48■■□□□ 1.19
GCFC2-202ENST00000409857 CABLES1Q8TDN4 633 aa22.48■■□□□ 1.19
GCFC2-202ENST00000409857 LTN1O94822 1766 aa22.48■■□□□ 1.19
GCFC2-202ENST00000409857 CPDO75976 1380 aa22.47■■□□□ 1.19
GCFC2-202ENST00000409857 AATKQ6ZMQ8 1374 aa22.46■■□□□ 1.19
GCFC2-202ENST00000409857 LRP6O75581 1613 aa22.46■■□□□ 1.19
GCFC2-202ENST00000409857 MAP2P11137 1827 aaKnown RBP22.46■■□□□ 1.19
GCFC2-202ENST00000409857 ABCC6O95255 1503 aa22.45■■□□□ 1.18
GCFC2-202ENST00000409857 SENP3-EIF4A1A0A087X0R7 540 aa22.45■■□□□ 1.18
GCFC2-202ENST00000409857 CC2D1BQ5T0F9 858 aaKnown RBP22.45■■□□□ 1.18
GCFC2-202ENST00000409857 ERICH6Q7L0X2 663 aa22.45■■□□□ 1.18
GCFC2-202ENST00000409857 HAP1P54257 671 aaPredicted RBP22.45■■□□□ 1.18
GCFC2-202ENST00000409857 MORC1Q86VD1 984 aa22.45■■□□□ 1.18
GCFC2-202ENST00000409857 COL14A1Q05707 1796 aaKnown RBP22.44■■□□□ 1.18
GCFC2-202ENST00000409857 PARD3Q8TEW0 1356 aa22.42■■□□□ 1.18
GCFC2-202ENST00000409857 COL18A1P39060 1754 aa22.42■■□□□ 1.18
GCFC2-202ENST00000409857 NUTM2BA6NNL0 878 aaPredicted RBP22.41■■□□□ 1.18
GCFC2-202ENST00000409857 NUTM2EB1AL46 878 aaPredicted RBP22.41■■□□□ 1.18
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms