RNA–Protein interactions for RNA: ENST00000409810.6

CHMP3-205, Transcript of charged multivesicular body protein 3, humanhuman

TSL 5

Gene CHMP3, Length 559 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-205ENST00000409810 MON2Q7Z3U7 1717 aa15.27■□□□□ 0.04
CHMP3-205ENST00000409810 EIF4G2P78344 907 aaKnown RBP eCLIP15.27■□□□□ 0.04
CHMP3-205ENST00000409810 ZNF692Q9BU19 519 aaPredicted RBP15.27■□□□□ 0.04
CHMP3-205ENST00000409810 USP6P35125 1406 aa15.26■□□□□ 0.03
CHMP3-205ENST00000409810 ADAMTS2O95450 1211 aa15.26■□□□□ 0.03
CHMP3-205ENST00000409810 ZNF772Q68DY9 489 aaPredicted RBP15.25■□□□□ 0.03
CHMP3-205ENST00000409810 TMC1Q8TDI8 760 aa15.25■□□□□ 0.03
CHMP3-205ENST00000409810 C8orf37Q96NL8 207 aa15.25■□□□□ 0.03
CHMP3-205ENST00000409810 CRYBG1Q9Y4K1 1723 aa15.25■□□□□ 0.03
CHMP3-205ENST00000409810 NRKQ7Z2Y5 1582 aa15.24■□□□□ 0.03
CHMP3-205ENST00000409810 HDGFL2Q7Z4V5 671 aaPredicted RBP15.23■□□□□ 0.03
CHMP3-205ENST00000409810 ABTB2Q8N961 1025 aa15.23■□□□□ 0.03
CHMP3-205ENST00000409810 PHRF1Q9P1Y6 1649 aaKnown RBP15.23■□□□□ 0.03
CHMP3-205ENST00000409810 CPSF1Q10570 1443 aaKnown RBP15.23■□□□□ 0.03
CHMP3-205ENST00000409810 KTN1Q86UP2 1357 aaKnown RBP15.23■□□□□ 0.03
CHMP3-205ENST00000409810 NGLY1Q96IV0 654 aa15.22■□□□□ 0.03
CHMP3-205ENST00000409810 TERF2IPQ9NYB0 399 aa15.22■□□□□ 0.03
CHMP3-205ENST00000409810 AFF2P51816 1311 aa15.21■□□□□ 0.03
CHMP3-205ENST00000409810 PLEKHG5O94827 1062 aa15.21■□□□□ 0.03
CHMP3-205ENST00000409810 CABLES1Q8TDN4 633 aa15.21■□□□□ 0.03
CHMP3-205ENST00000409810 RGS17Q9UGC6 210 aaPredicted RBP15.21■□□□□ 0.03
CHMP3-205ENST00000409810 NWD2Q9ULI1 1742 aa15.2■□□□□ 0.02
CHMP3-205ENST00000409810 TTC21AQ8NDW8 1320 aa15.2■□□□□ 0.02
CHMP3-205ENST00000409810 SSH2Q76I76 1423 aa15.2■□□□□ 0.02
CHMP3-205ENST00000409810 PIK3C2AO00443 1686 aa15.2■□□□□ 0.02
CHMP3-205ENST00000409810 HSPA5P11021 654 aaKnown RBP15.2■□□□□ 0.02
CHMP3-205ENST00000409810 NLRP13Q86W25 1043 aa15.2■□□□□ 0.02
CHMP3-205ENST00000409810 TNKS1BP1Q9C0C2 1729 aaKnown RBP15.2■□□□□ 0.02
CHMP3-205ENST00000409810 CD163L1Q9NR16 1453 aa15.2■□□□□ 0.02
CHMP3-205ENST00000409810 PLCH1Q4KWH8 1693 aa15.19■□□□□ 0.02
CHMP3-205ENST00000409810 SLC12A5Q9H2X9 1139 aa15.19■□□□□ 0.02
CHMP3-205ENST00000409810 COL14A1Q05707 1796 aaKnown RBP15.19■□□□□ 0.02
CHMP3-205ENST00000409810 TTC21BQ7Z4L5 1316 aa15.18■□□□□ 0.02
CHMP3-205ENST00000409810 EDC4Q6P2E9 1401 aaKnown RBP15.18■□□□□ 0.02
CHMP3-205ENST00000409810 A0A1W2PP64 1363 aa15.18■□□□□ 0.02
CHMP3-205ENST00000409810 ANKRD36BQ8N2N9 1353 aa15.18■□□□□ 0.02
CHMP3-205ENST00000409810 MYOM1P52179 1685 aa15.18■□□□□ 0.02
CHMP3-205ENST00000409810 NUTM2GQ5VZR2 741 aa15.17■□□□□ 0.02
CHMP3-205ENST00000409810 FNBP4Q8N3X1 1017 aaPredicted RBP15.17■□□□□ 0.02
CHMP3-205ENST00000409810 USP21Q9UK80 565 aa15.17■□□□□ 0.02
CHMP3-205ENST00000409810 USP19O94966 1318 aa15.17■□□□□ 0.02
CHMP3-205ENST00000409810 USP54Q70EL1 1684 aa15.16■□□□□ 0.02
CHMP3-205ENST00000409810 NLRP6P59044 892 aa15.16■□□□□ 0.02
CHMP3-205ENST00000409810 SLIT2O94813 1529 aa15.16■□□□□ 0.02
CHMP3-205ENST00000409810 POTEAQ6S8J7 498 aa15.15■□□□□ 0.02
CHMP3-205ENST00000409810 TRPC5Q9UL62 973 aaPredicted RBP15.15■□□□□ 0.02
CHMP3-205ENST00000409810 SLIT3O75094 1523 aa15.15■□□□□ 0.02
CHMP3-205ENST00000409810 ILDR2Q71H61 639 aa15.14■□□□□ 0.01
CHMP3-205ENST00000409810 SUGP2Q8IX01 1082 aaKnown RBP eCLIP15.14■□□□□ 0.01
CHMP3-205ENST00000409810 PRDM11Q9NQV5 511 aa15.14■□□□□ 0.01
CHMP3-205ENST00000409810 NRAPQ86VF7 1730 aa15.13■□□□□ 0.01
CHMP3-205ENST00000409810 UNC5CLQ8IV45 518 aa15.13■□□□□ 0.01
CHMP3-205ENST00000409810 POLR3GLQ9BT43 218 aa15.13■□□□□ 0.01
CHMP3-205ENST00000409810 KIAA0232Q92628 1395 aa15.12■□□□□ 0.01
CHMP3-205ENST00000409810 ATRNO75882 1429 aa15.12■□□□□ 0.01
CHMP3-205ENST00000409810 GCP02774 474 aa15.12■□□□□ 0.01
CHMP3-205ENST00000409810 RXRBP28702 533 aa15.12■□□□□ 0.01
CHMP3-205ENST00000409810 KCNH5Q8NCM2 988 aa15.12■□□□□ 0.01
CHMP3-205ENST00000409810 QTRT2Q9H974 415 aaKnown RBP15.12■□□□□ 0.01
CHMP3-205ENST00000409810 BCL9LQ86UU0 1499 aa15.12■□□□□ 0.01
CHMP3-205ENST00000409810 KIF20BQ96Q89 1820 aa15.12■□□□□ 0.01
CHMP3-205ENST00000409810 CPDO75976 1380 aa15.11■□□□□ 0.01
CHMP3-205ENST00000409810 USP31Q70CQ4 1352 aa15.11■□□□□ 0.01
CHMP3-205ENST00000409810 FAM83GA6ND36 823 aa15.11■□□□□ 0.01
CHMP3-205ENST00000409810 RBM6P78332 1123 aaKnown RBP15.11■□□□□ 0.01
CHMP3-205ENST00000409810 CDK12Q9NYV4 1490 aaPredicted RBP15.1■□□□□ 0.01
CHMP3-205ENST00000409810 ZC3H6P61129 1189 aaKnown RBP15.1■□□□□ 0.01
CHMP3-205ENST00000409810 NME9Q86XW9 330 aa15.09■□□□□ 0.01
CHMP3-205ENST00000409810 BTG4Q9NY30 223 aa15.09■□□□□ 0.01
CHMP3-205ENST00000409810 LMO7Q8WWI1 1683 aa15.08■□□□□ 0
CHMP3-205ENST00000409810 LTN1O94822 1766 aa15.08■□□□□ 0
CHMP3-205ENST00000409810 OVOS2A0A0J9YW53 1432 aa15.08■□□□□ 0
CHMP3-205ENST00000409810 OVOS2Q6IE36 1432 aa15.08■□□□□ 0
CHMP3-205ENST00000409810 NSD3Q9BZ95 1437 aa15.07■□□□□ 0
CHMP3-205ENST00000409810 NFAT5O94916 1531 aa15.07■□□□□ 0
CHMP3-205ENST00000409810 ABCC6O95255 1503 aa15.07■□□□□ 0
CHMP3-205ENST00000409810 CHRNA2Q15822 529 aa15.06■□□□□ 0
CHMP3-205ENST00000409810 VPS72Q15906 364 aa15.06■□□□□ 0
CHMP3-205ENST00000409810 COG3Q96JB2 828 aa15.06■□□□□ 0
CHMP3-205ENST00000409810 GJD4Q96KN9 370 aaPredicted RBP15.06■□□□□ 0
CHMP3-205ENST00000409810 CCDC9Q9Y3X0 531 aaKnown RBP15.06■□□□□ 0
CHMP3-205ENST00000409810 ZBTB7CA1YPR0 619 aa15.05■□□□□ -0
CHMP3-205ENST00000409810 SOX12O15370 315 aa15.05■□□□□ -0
CHMP3-205ENST00000409810 AATKQ6ZMQ8 1374 aa15.05■□□□□ -0
CHMP3-205ENST00000409810 COL18A1P39060 1754 aa15.04■□□□□ -0
CHMP3-205ENST00000409810 GLI3P10071 1580 aa15.04■□□□□ -0
CHMP3-205ENST00000409810 KIF7Q2M1P5 1343 aa15.04■□□□□ -0
CHMP3-205ENST00000409810 ZEB1P37275 1124 aaPredicted RBP15.04■□□□□ -0
CHMP3-205ENST00000409810 RGPD5Q99666 1765 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 ANKRD26Q9UPS8 1709 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 CAMTA1Q9Y6Y1 1673 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 RGS12O14924 1447 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 CGNL1Q0VF96 1302 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 EVA1CP58658 441 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 ARHGEF25Q86VW2 580 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 ZRANB1Q9UGI0 708 aa15.03■□□□□ -0
CHMP3-205ENST00000409810 C11orf95C9JLR9 678 aaPredicted RBP15.02■□□□□ -0
CHMP3-205ENST00000409810 STRN4Q9NRL3 753 aa15.02■□□□□ -0
CHMP3-205ENST00000409810 COL5A2P05997 1499 aaPredicted RBP15.01□□□□□ -0.01
CHMP3-205ENST00000409810 SOCS7O14512 581 aa15.01□□□□□ -0.01
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms