RNA–Protein interactions for RNA: ENST00000409776.6

RGPD1-202, Transcript of RANBP2-like and GRIP domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RGPD1, Length 6,692 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RGPD1-202ENST00000409776 HSP90AB2PQ58FF8 381 aa4.88□□□□□ -1.63
RGPD1-202ENST00000409776 WDR75Q8IWA0 830 aaKnown RBP4.88□□□□□ -1.63
RGPD1-202ENST00000409776 DNAAF4Q8WXU2 420 aa4.88□□□□□ -1.63
RGPD1-202ENST00000409776 SALL2Q9Y467 1007 aaPredicted RBP4.88□□□□□ -1.63
RGPD1-202ENST00000409776 HSP90AA5PQ58FG0 334 aa4.88□□□□□ -1.63
RGPD1-202ENST00000409776 ERLIN2O94905 339 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 MCCP23508 829 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 GJC2Q5T442 439 aaPredicted RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 LRCH2Q5VUJ6 765 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 FAM107BQ9H098 131 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 BIN2Q9UBW5 565 aaPredicted RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 R3HCC1Q9Y3T6 440 aaKnown RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 LSM1O15116 133 aaKnown RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 FILIP1LQ4L180 1135 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 BICDL2A1A5D9 508 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 KIF1CO43896 1103 aaKnown RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 SKOR1P84550 965 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 NBPF6Q5VWK0 638 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 KLHL10Q6JEL2 608 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 RNF214Q8ND24 703 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 TRAF3IP1Q8TDR0 691 aaPredicted RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 NBPF4Q96M43 638 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 VCXQ9H320 206 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 CHMP4BQ9H444 224 aaKnown RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 A0A1B0GUL7 405 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 DYTNA2CJ06 578 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 CHGBP05060 677 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 CHMP4CQ96CF2 233 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 ZMYND15Q9H091 742 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 ARID3CA6NKF2 412 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 CCDC158Q5M9N0 1113 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 FOXD4L5Q5VV16 416 aaPredicted RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 FOXD4L4Q8WXT5 416 aaPredicted RBP4.87□□□□□ -1.63
RGPD1-202ENST00000409776 CTAGE9A4FU28 777 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 NUCB1Q02818 461 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 CCDC40Q4G0X9 1142 aa4.87□□□□□ -1.63
RGPD1-202ENST00000409776 ANKRD18BA2A2Z9 1011 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 ERC2O15083 957 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 PSMD6Q15008 389 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 PRR16Q569H4 304 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 ODF2Q5BJF6 829 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 GBP3Q9H0R5 595 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 PRDM5Q9NQX1 630 aaPredicted RBP4.86□□□□□ -1.63
RGPD1-202ENST00000409776 DIXDC1Q155Q3 683 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 IQCEQ6IPM2 695 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 ARMC9Q7Z3E5 817 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 SMC1BQ8NDV3 1235 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 PPP1R9BQ96SB3 815 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 SELENOSQ9BQE4 189 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.86□□□□□ -1.63
RGPD1-202ENST00000409776 MAP2K1Q02750 393 aaPredicted RBP4.86□□□□□ -1.63
RGPD1-202ENST00000409776 AP1ARQ63HQ0 302 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 CEP57Q86XR8 500 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 TRIM52Q96A61 297 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 CWC25Q9NXE8 425 aaPredicted RBP4.86□□□□□ -1.63
RGPD1-202ENST00000409776 SMC3Q9UQE7 1217 aa4.86□□□□□ -1.63
RGPD1-202ENST00000409776 SSBP05455 408 aaKnown RBP eCLIP4.86□□□□□ -1.63
RGPD1-202ENST00000409776 VPS41P49754 854 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 USP37Q86T82 979 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 CTAGE6Q86UF2 777 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 ZNF280CQ8ND82 737 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 LZTS3O60299 673 aaPredicted RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 ECM2O94769 699 aaPredicted RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 ATICP31939 592 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 GRIPAP1Q4V328 841 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 CCDC92Q53HC0 331 aaPredicted RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 TRERF1Q96PN7 1200 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 ESYT2A0FGR8 921 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 BAG4O95429 457 aaKnown RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 PRPHP41219 470 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 PDCD2Q16342 344 aaPredicted RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 CCDC112Q8NEF3 446 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 RTF1Q92541 710 aaKnown RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 OPTNQ96CV9 577 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 MRFAP1L1Q96HT8 127 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 TERF2IPQ9NYB0 399 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 MACROD2A1Z1Q3 448 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 STK10O94804 968 aaKnown RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 CHGAP10645 457 aaKnown RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 CTR9Q6PD62 1173 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 ZHX3Q9H4I2 956 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 SPECC1L-ADORA2AF8WAN1 911 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 PEX14O75381 377 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 LUC7L3O95232 432 aaKnown RBP4.85□□□□□ -1.63
RGPD1-202ENST00000409776 ANGPT1Q15389 498 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 KIF6Q6ZMV9 814 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 PALM2Q8IXS6 379 aa4.85□□□□□ -1.63
RGPD1-202ENST00000409776 ERLIN1O75477 346 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 SERPINI2O75830 405 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 CA8P35219 290 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 STK3Q13188 491 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 CTNNBL1Q8WYA6 563 aaPredicted RBP4.84□□□□□ -1.63
RGPD1-202ENST00000409776 PAWRQ96IZ0 340 aaKnown RBP4.84□□□□□ -1.63
RGPD1-202ENST00000409776 PPFIA2O75334 1257 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 PLS1Q14651 629 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 IFFO2Q5TF58 517 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 MIER3Q7Z3K6 550 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 PCMTD1Q96MG8 357 aaPredicted RBP4.84□□□□□ -1.63
RGPD1-202ENST00000409776 VCX3BQ9H321 246 aa4.84□□□□□ -1.63
RGPD1-202ENST00000409776 NOP56O00567 594 aaKnown RBP4.84□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms