RNA–Protein interactions for RNA: ENST00000409741.5

SLC3A1-207, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 1,537 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-207ENST00000409741 NSD2O96028 1365 aa16.64■□□□□ 0.26
SLC3A1-207ENST00000409741 MORC1Q86VD1 984 aa16.64■□□□□ 0.25
SLC3A1-207ENST00000409741 NRKQ7Z2Y5 1582 aa16.64■□□□□ 0.25
SLC3A1-207ENST00000409741 CCER2I3L3R5 266 aa16.63■□□□□ 0.25
SLC3A1-207ENST00000409741 XPCQ01831 940 aaPredicted RBP16.63■□□□□ 0.25
SLC3A1-207ENST00000409741 PSME1Q06323 249 aa16.63■□□□□ 0.25
SLC3A1-207ENST00000409741 CCDC184Q52MB2 194 aa16.63■□□□□ 0.25
SLC3A1-207ENST00000409741 BRINP3Q76B58 766 aa16.63■□□□□ 0.25
SLC3A1-207ENST00000409741 MYBBP1AQ9BQG0 1328 aaKnown RBP16.63■□□□□ 0.25
SLC3A1-207ENST00000409741 DDX17Q92841 729 aaKnown RBP16.62■□□□□ 0.25
SLC3A1-207ENST00000409741 TNNT2P45379 298 aaPredicted RBP16.61■□□□□ 0.25
SLC3A1-207ENST00000409741 KIF1AQ12756 1690 aa16.61■□□□□ 0.25
SLC3A1-207ENST00000409741 TTC21AQ8NDW8 1320 aa16.61■□□□□ 0.25
SLC3A1-207ENST00000409741 PPP2R1AP30153 589 aa16.6■□□□□ 0.25
SLC3A1-207ENST00000409741 PAK3O75914 559 aaPredicted RBP16.6■□□□□ 0.25
SLC3A1-207ENST00000409741 KRT28Q7Z3Y7 464 aa16.6■□□□□ 0.25
SLC3A1-207ENST00000409741 KIF20BQ96Q89 1820 aa16.58■□□□□ 0.25
SLC3A1-207ENST00000409741 NLRP13Q86W25 1043 aa16.58■□□□□ 0.24
SLC3A1-207ENST00000409741 COG3Q96JB2 828 aa16.58■□□□□ 0.24
SLC3A1-207ENST00000409741 BRD4O60885 1362 aaPredicted RBP16.58■□□□□ 0.24
SLC3A1-207ENST00000409741 NPHP3Q7Z494 1330 aa16.57■□□□□ 0.24
SLC3A1-207ENST00000409741 NUTM2GQ5VZR2 741 aa16.57■□□□□ 0.24
SLC3A1-207ENST00000409741 MRS2Q9HD23 443 aa16.57■□□□□ 0.24
SLC3A1-207ENST00000409741 OVOS2A0A0J9YW53 1432 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 OVOS2Q6IE36 1432 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 FBLN1P23142 703 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 ABTB2Q8N961 1025 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 USP31Q70CQ4 1352 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 ANKRD26Q9UPS8 1709 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 PIK3C2AO00443 1686 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 NLRP6P59044 892 aa16.55■□□□□ 0.24
SLC3A1-207ENST00000409741 PXDNQ92626 1479 aa16.54■□□□□ 0.24
SLC3A1-207ENST00000409741 TRPM3Q9HCF6 1732 aaPredicted RBP16.53■□□□□ 0.24
SLC3A1-207ENST00000409741 CERKQ8TCT0 537 aa16.53■□□□□ 0.24
SLC3A1-207ENST00000409741 LMOD2Q6P5Q4 547 aa16.52■□□□□ 0.24
SLC3A1-207ENST00000409741 SCAF1Q9H7N4 1312 aaKnown RBP16.52■□□□□ 0.23
SLC3A1-207ENST00000409741 SBNO1A3KN83 1393 aa16.51■□□□□ 0.23
SLC3A1-207ENST00000409741 SOX12O15370 315 aa16.51■□□□□ 0.23
SLC3A1-207ENST00000409741 TOM1O60784 492 aa16.51■□□□□ 0.23
SLC3A1-207ENST00000409741 MTHFSP49914 203 aa16.51■□□□□ 0.23
SLC3A1-207ENST00000409741 SOS2Q07890 1332 aaPredicted RBP16.51■□□□□ 0.23
SLC3A1-207ENST00000409741 UBAP1LF5GYI3 381 aa16.5■□□□□ 0.23
SLC3A1-207ENST00000409741 IQSEC2Q5JU85 1478 aa16.5■□□□□ 0.23
SLC3A1-207ENST00000409741 POLKQ9UBT6 870 aa16.5■□□□□ 0.23
SLC3A1-207ENST00000409741 AATKQ6ZMQ8 1374 aa16.49■□□□□ 0.23
SLC3A1-207ENST00000409741 ROBO1Q9Y6N7 1651 aa16.49■□□□□ 0.23
SLC3A1-207ENST00000409741 PLEKHG5O94827 1062 aa16.49■□□□□ 0.23
SLC3A1-207ENST00000409741 PIP4K2BP78356 416 aa16.49■□□□□ 0.23
SLC3A1-207ENST00000409741 RRS1Q15050 365 aaKnown RBP16.49■□□□□ 0.23
SLC3A1-207ENST00000409741 TNS3Q68CZ2 1445 aa16.49■□□□□ 0.23
SLC3A1-207ENST00000409741 EMILIN1Q9Y6C2 1016 aa16.49■□□□□ 0.23
SLC3A1-207ENST00000409741 SPATA31A3Q5VYP0 1347 aa16.48■□□□□ 0.23
SLC3A1-207ENST00000409741 MARF1Q9Y4F3 1742 aaKnown RBP16.47■□□□□ 0.23
SLC3A1-207ENST00000409741 NHSL1Q5SYE7 1610 aa16.47■□□□□ 0.23
SLC3A1-207ENST00000409741 FAM9BQ8IZU0 186 aa16.47■□□□□ 0.23
SLC3A1-207ENST00000409741 PNISRQ8TF01 805 aaKnown RBP16.47■□□□□ 0.23
SLC3A1-207ENST00000409741 ALS2Q96Q42 1657 aa16.47■□□□□ 0.23
SLC3A1-207ENST00000409741 USP54Q70EL1 1684 aa16.46■□□□□ 0.23
SLC3A1-207ENST00000409741 PPM1GO15355 546 aaPredicted RBP16.46■□□□□ 0.23
SLC3A1-207ENST00000409741 USP19O94966 1318 aa16.45■□□□□ 0.22
SLC3A1-207ENST00000409741 SMG6Q86US8 1419 aaKnown RBP16.44■□□□□ 0.22
SLC3A1-207ENST00000409741 CFAP53Q96M91 514 aa16.44■□□□□ 0.22
SLC3A1-207ENST00000409741 YTHDC1Q96MU7 727 aaKnown RBP16.44■□□□□ 0.22
SLC3A1-207ENST00000409741 MAP3K19Q56UN5 1328 aa16.44■□□□□ 0.22
SLC3A1-207ENST00000409741 ARHGEF10O15013 1369 aa16.44■□□□□ 0.22
SLC3A1-207ENST00000409741 AHDC1Q5TGY3 1603 aaPredicted RBP16.43■□□□□ 0.22
SLC3A1-207ENST00000409741 GCP02774 474 aa16.43■□□□□ 0.22
SLC3A1-207ENST00000409741 CABLES1Q8TDN4 633 aa16.43■□□□□ 0.22
SLC3A1-207ENST00000409741 SLIT3O75094 1523 aa16.43■□□□□ 0.22
SLC3A1-207ENST00000409741 MED1Q15648 1581 aaPredicted RBP16.43■□□□□ 0.22
SLC3A1-207ENST00000409741 KCNH5Q8NCM2 988 aa16.42■□□□□ 0.22
SLC3A1-207ENST00000409741 PNPLA6Q8IY17 1366 aa16.42■□□□□ 0.22
SLC3A1-207ENST00000409741 NFAT5O94916 1531 aa16.42■□□□□ 0.22
SLC3A1-207ENST00000409741 COL3A1P02461 1466 aaPredicted RBP16.41■□□□□ 0.22
SLC3A1-207ENST00000409741 MAP2P11137 1827 aaKnown RBP16.41■□□□□ 0.22
SLC3A1-207ENST00000409741 CDK12Q9NYV4 1490 aaPredicted RBP16.41■□□□□ 0.22
SLC3A1-207ENST00000409741 INSRP06213 1382 aa16.4■□□□□ 0.22
SLC3A1-207ENST00000409741 LRRC59Q96AG4 307 aaKnown RBP16.4■□□□□ 0.22
SLC3A1-207ENST00000409741 PEAK1Q9H792 1746 aa16.39■□□□□ 0.21
SLC3A1-207ENST00000409741 ZBTB7CA1YPR0 619 aa16.39■□□□□ 0.21
SLC3A1-207ENST00000409741 AMPHP49418 695 aa16.39■□□□□ 0.21
SLC3A1-207ENST00000409741 WDR43Q15061 677 aaKnown RBP eCLIP16.39■□□□□ 0.21
SLC3A1-207ENST00000409741 HSP90AB2PQ58FF8 381 aa16.39■□□□□ 0.21
SLC3A1-207ENST00000409741 ADAMTS8Q9UP79 889 aa16.39■□□□□ 0.21
SLC3A1-207ENST00000409741 DIAPH1O60610 1272 aaKnown RBP16.38■□□□□ 0.21
SLC3A1-207ENST00000409741 FLT4P35916 1363 aa16.37■□□□□ 0.21
SLC3A1-207ENST00000409741 ZC3H6P61129 1189 aaKnown RBP16.37■□□□□ 0.21
SLC3A1-207ENST00000409741 ARHGEF25Q86VW2 580 aa16.37■□□□□ 0.21
SLC3A1-207ENST00000409741 PHLPP1O60346 1717 aa16.36■□□□□ 0.21
SLC3A1-207ENST00000409741 SHPRHQ149N8 1683 aa16.36■□□□□ 0.21
SLC3A1-207ENST00000409741 HOXC9P31274 260 aa16.36■□□□□ 0.21
SLC3A1-207ENST00000409741 COL16A1Q07092 1604 aaPredicted RBP16.36■□□□□ 0.21
SLC3A1-207ENST00000409741 PHRF1Q9P1Y6 1649 aaKnown RBP16.35■□□□□ 0.21
SLC3A1-207ENST00000409741 IL13P35225 146 aa16.35■□□□□ 0.21
SLC3A1-207ENST00000409741 CRYBG1Q9Y4K1 1723 aa16.35■□□□□ 0.21
SLC3A1-207ENST00000409741 U2SURPO15042 1029 aaKnown RBP16.35■□□□□ 0.21
SLC3A1-207ENST00000409741 EIF4A2Q14240 407 aaKnown RBP16.35■□□□□ 0.21
SLC3A1-207ENST00000409741 NUDCQ9Y266 331 aa16.35■□□□□ 0.21
SLC3A1-207ENST00000409741 RTL1A6NKG5 1358 aa16.34■□□□□ 0.21
SLC3A1-207ENST00000409741 KIF24Q5T7B8 1368 aa16.34■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms