RNA–Protein interactions for RNA: ENST00000409541.5

TMEM139-204, Transcript of transmembrane protein 139, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TMEM139, Length 1,907 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM139-204ENST00000409541 KIF20BQ96Q89 1820 aa15.48■□□□□ 0.07
TMEM139-204ENST00000409541 NUDT16Q96DE0 195 aaKnown RBP15.48■□□□□ 0.07
TMEM139-204ENST00000409541 COL3A1P02461 1466 aaPredicted RBP15.47■□□□□ 0.07
TMEM139-204ENST00000409541 CPSF1Q10570 1443 aaKnown RBP15.47■□□□□ 0.07
TMEM139-204ENST00000409541 SLC26A8Q96RN1 970 aa15.47■□□□□ 0.07
TMEM139-204ENST00000409541 EDC4Q6P2E9 1401 aaKnown RBP15.46■□□□□ 0.07
TMEM139-204ENST00000409541 SLIT1O75093 1534 aa15.46■□□□□ 0.07
TMEM139-204ENST00000409541 U2SURPO15042 1029 aaKnown RBP15.46■□□□□ 0.07
TMEM139-204ENST00000409541 CRBNQ96SW2 442 aa15.46■□□□□ 0.07
TMEM139-204ENST00000409541 CCDC61Q9Y6R9 512 aa15.46■□□□□ 0.07
TMEM139-204ENST00000409541 ARHGAP23Q9P227 1491 aa15.45■□□□□ 0.06
TMEM139-204ENST00000409541 NCKAP5LQ9HCH0 1330 aa15.45■□□□□ 0.06
TMEM139-204ENST00000409541 GOLGA6L2Q8N9W4 650 aaPredicted RBP15.45■□□□□ 0.06
TMEM139-204ENST00000409541 CERKQ8TCT0 537 aa15.45■□□□□ 0.06
TMEM139-204ENST00000409541 CDC42BPGQ6DT37 1551 aa15.44■□□□□ 0.06
TMEM139-204ENST00000409541 C20orf194Q5TEA3 1177 aa15.44■□□□□ 0.06
TMEM139-204ENST00000409541 THEMISQ8N1K5 641 aaPredicted RBP15.44■□□□□ 0.06
TMEM139-204ENST00000409541 PHF23Q9BUL5 403 aaPredicted RBP15.44■□□□□ 0.06
TMEM139-204ENST00000409541 DIAPH1O60610 1272 aaKnown RBP15.43■□□□□ 0.06
TMEM139-204ENST00000409541 CCDC27Q2M243 656 aa15.43■□□□□ 0.06
TMEM139-204ENST00000409541 PRR36Q9H6K5 1346 aa15.42■□□□□ 0.06
TMEM139-204ENST00000409541 PNPLA6Q8IY17 1366 aa15.42■□□□□ 0.06
TMEM139-204ENST00000409541 ADGRB2O60241 1585 aa15.42■□□□□ 0.06
TMEM139-204ENST00000409541 PTPRUQ92729 1446 aa15.42■□□□□ 0.06
TMEM139-204ENST00000409541 NME9Q86XW9 330 aa15.42■□□□□ 0.06
TMEM139-204ENST00000409541 WDR63Q8IWG1 891 aa15.42■□□□□ 0.06
TMEM139-204ENST00000409541 PPM1GO15355 546 aaPredicted RBP15.41■□□□□ 0.06
TMEM139-204ENST00000409541 SIPA1L2Q9P2F8 1722 aaPredicted RBP15.41■□□□□ 0.06
TMEM139-204ENST00000409541 NCBP3Q53F19 620 aaKnown RBP15.41■□□□□ 0.06
TMEM139-204ENST00000409541 FBLN1P23142 703 aa15.4■□□□□ 0.06
TMEM139-204ENST00000409541 POLKQ9UBT6 870 aa15.4■□□□□ 0.06
TMEM139-204ENST00000409541 AMOTL2Q9Y2J4 779 aa15.4■□□□□ 0.06
TMEM139-204ENST00000409541 TBX22Q9Y458 520 aa15.4■□□□□ 0.06
TMEM139-204ENST00000409541 MAPK8IP3Q9UPT6 1336 aa15.4■□□□□ 0.06
TMEM139-204ENST00000409541 BCAR3O75815 825 aa15.39■□□□□ 0.05
TMEM139-204ENST00000409541 PLEKHF1Q96S99 279 aa15.39■□□□□ 0.05
TMEM139-204ENST00000409541 MON2Q7Z3U7 1717 aa15.39■□□□□ 0.05
TMEM139-204ENST00000409541 ZNF692Q9BU19 519 aaPredicted RBP15.39■□□□□ 0.05
TMEM139-204ENST00000409541 ZRANB1Q9UGI0 708 aa15.39■□□□□ 0.05
TMEM139-204ENST00000409541 ITSN1Q15811 1721 aa15.38■□□□□ 0.05
TMEM139-204ENST00000409541 NUTM2FA1L443 756 aa15.38■□□□□ 0.05
TMEM139-204ENST00000409541 COG3Q96JB2 828 aa15.38■□□□□ 0.05
TMEM139-204ENST00000409541 DIP2AQ14689 1571 aa15.37■□□□□ 0.05
TMEM139-204ENST00000409541 AKAP12Q02952 1782 aa15.37■□□□□ 0.05
TMEM139-204ENST00000409541 PTCH1Q13635 1447 aa15.37■□□□□ 0.05
TMEM139-204ENST00000409541 TMPOP42166 694 aaKnown RBP15.37■□□□□ 0.05
TMEM139-204ENST00000409541 PNNQ9H307 717 aaKnown RBP15.37■□□□□ 0.05
TMEM139-204ENST00000409541 MYH16Q9H6N6 1097 aa15.37■□□□□ 0.05
TMEM139-204ENST00000409541 EMILIN1Q9Y6C2 1016 aa15.36■□□□□ 0.05
TMEM139-204ENST00000409541 LTBP4Q8N2S1 1624 aa15.36■□□□□ 0.05
TMEM139-204ENST00000409541 AATKQ6ZMQ8 1374 aa15.35■□□□□ 0.05
TMEM139-204ENST00000409541 ACEP12821 1306 aa15.35■□□□□ 0.05
TMEM139-204ENST00000409541 ZNF335Q9H4Z2 1342 aaPredicted RBP15.35■□□□□ 0.05
TMEM139-204ENST00000409541 TOPAZ1Q8N9V7 1692 aa15.35■□□□□ 0.05
TMEM139-204ENST00000409541 FCHSD2O94868 740 aa15.34■□□□□ 0.05
TMEM139-204ENST00000409541 CDK12Q9NYV4 1490 aaPredicted RBP15.34■□□□□ 0.05
TMEM139-204ENST00000409541 LRRC7Q96NW7 1537 aa15.33■□□□□ 0.05
TMEM139-204ENST00000409541 PLEKHG3A1L390 1219 aa15.33■□□□□ 0.05
TMEM139-204ENST00000409541 CANXP27824 592 aaKnown RBP15.33■□□□□ 0.05
TMEM139-204ENST00000409541 TRIM35Q9UPQ4 493 aa15.33■□□□□ 0.04
TMEM139-204ENST00000409541 TTC21BQ7Z4L5 1316 aa15.32■□□□□ 0.04
TMEM139-204ENST00000409541 MAP2P11137 1827 aaKnown RBP15.32■□□□□ 0.04
TMEM139-204ENST00000409541 PRKAR2BP31323 418 aa15.32■□□□□ 0.04
TMEM139-204ENST00000409541 RIPK4P57078 832 aa15.32■□□□□ 0.04
TMEM139-204ENST00000409541 RSPH6AQ9H0K4 717 aa15.32■□□□□ 0.04
TMEM139-204ENST00000409541 NEFMP07197 916 aa15.31■□□□□ 0.04
TMEM139-204ENST00000409541 USP6P35125 1406 aa15.31■□□□□ 0.04
TMEM139-204ENST00000409541 RARSP54136 660 aaKnown RBP15.31■□□□□ 0.04
TMEM139-204ENST00000409541 RRS1Q15050 365 aaKnown RBP15.31■□□□□ 0.04
TMEM139-204ENST00000409541 NRKQ7Z2Y5 1582 aa15.31■□□□□ 0.04
TMEM139-204ENST00000409541 XRN1Q8IZH2 1706 aaKnown RBP15.31■□□□□ 0.04
TMEM139-204ENST00000409541 FANCIQ9NVI1 1328 aa15.3■□□□□ 0.04
TMEM139-204ENST00000409541 HMOX1P09601 288 aa15.3■□□□□ 0.04
TMEM139-204ENST00000409541 IL13P35225 146 aa15.3■□□□□ 0.04
TMEM139-204ENST00000409541 PDE3AQ14432 1141 aa15.3■□□□□ 0.04
TMEM139-204ENST00000409541 FRAT1Q92837 279 aaPredicted RBP15.3■□□□□ 0.04
TMEM139-204ENST00000409541 KCNA6P17658 529 aa15.29■□□□□ 0.04
TMEM139-204ENST00000409541 ANKLE2Q86XL3 938 aa15.29■□□□□ 0.04
TMEM139-204ENST00000409541 TSR2Q969E8 191 aaKnown RBP15.29■□□□□ 0.04
TMEM139-204ENST00000409541 PIK3R4Q99570 1358 aa15.29■□□□□ 0.04
TMEM139-204ENST00000409541 IL16Q14005 1332 aa15.28■□□□□ 0.04
TMEM139-204ENST00000409541 TCERG1O14776 1098 aaKnown RBP15.28■□□□□ 0.04
TMEM139-204ENST00000409541 PMFBP1Q8TBY8 1022 aa15.28■□□□□ 0.04
TMEM139-204ENST00000409541 BCL2L13Q9BXK5 485 aa15.28■□□□□ 0.04
TMEM139-204ENST00000409541 OVOS2A0A0J9YW53 1432 aa15.28■□□□□ 0.04
TMEM139-204ENST00000409541 OVOS2Q6IE36 1432 aa15.28■□□□□ 0.04
TMEM139-204ENST00000409541 KDM2BQ8NHM5 1336 aa15.28■□□□□ 0.04
TMEM139-204ENST00000409541 CENPQQ7L2Z9 268 aaPredicted RBP15.27■□□□□ 0.03
TMEM139-204ENST00000409541 PANK1Q8TE04 598 aa15.27■□□□□ 0.03
TMEM139-204ENST00000409541 CT47B1P0C2W7 299 aaPredicted RBP15.26■□□□□ 0.03
TMEM139-204ENST00000409541 EXOSC9Q06265 439 aaKnown RBP15.26■□□□□ 0.03
TMEM139-204ENST00000409541 NGDNQ8NEJ9 315 aaKnown RBP15.26■□□□□ 0.03
TMEM139-204ENST00000409541 PHACTR3Q96KR7 559 aa15.26■□□□□ 0.03
TMEM139-204ENST00000409541 NPHP4O75161 1426 aaPredicted RBP15.26■□□□□ 0.03
TMEM139-204ENST00000409541 SSH2Q76I76 1423 aa15.25■□□□□ 0.03
TMEM139-204ENST00000409541 NFE2L2Q16236 605 aa15.25■□□□□ 0.03
TMEM139-204ENST00000409541 COG6Q9Y2V7 657 aa15.25■□□□□ 0.03
TMEM139-204ENST00000409541 TTC21AQ8NDW8 1320 aa15.25■□□□□ 0.03
TMEM139-204ENST00000409541 ANKARQ7Z5J8 1434 aa15.24■□□□□ 0.03
TMEM139-204ENST00000409541 SOX12O15370 315 aa15.23■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 9.7 ms