RNA–Protein interactions for RNA: ENST00000409402.8

SPIRE1-202, Transcript of spire type actin nucleation factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPIRE1, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIRE1-202ENST00000409402 SLC4A3P48751 1232 aa30.32■■■□□ 2.44
SPIRE1-202ENST00000409402 BRMS1Q9HCU9 246 aa30.3■■■□□ 2.44
SPIRE1-202ENST00000409402 CDC45O75419 566 aa30.3■■■□□ 2.44
SPIRE1-202ENST00000409402 PIP4K2BP78356 416 aa30.29■■■□□ 2.44
SPIRE1-202ENST00000409402 ERC1Q8IUD2 1116 aa30.29■■■□□ 2.44
SPIRE1-202ENST00000409402 ANKRD30BQ9BXX2 1392 aa30.29■■■□□ 2.44
SPIRE1-202ENST00000409402 HDGFL1Q5TGJ6 251 aa30.28■■■□□ 2.44
SPIRE1-202ENST00000409402 CNNM1Q9NRU3 951 aa30.28■■■□□ 2.44
SPIRE1-202ENST00000409402 PSMA5P28066 241 aa30.28■■■□□ 2.44
SPIRE1-202ENST00000409402 EXOSC9Q06265 439 aaKnown RBP30.28■■■□□ 2.44
SPIRE1-202ENST00000409402 XBP1P17861 261 aa30.28■■■□□ 2.44
SPIRE1-202ENST00000409402 SART3Q15020 963 aaKnown RBP30.27■■■□□ 2.44
SPIRE1-202ENST00000409402 GNL3LQ9NVN8 582 aaKnown RBP30.27■■■□□ 2.44
SPIRE1-202ENST00000409402 KIAA0586Q9BVV6 1533 aa30.27■■■□□ 2.44
SPIRE1-202ENST00000409402 DNAJC2Q99543 621 aaKnown RBP30.27■■■□□ 2.44
SPIRE1-202ENST00000409402 IKQ13123 557 aaPredicted RBP30.26■■■□□ 2.44
SPIRE1-202ENST00000409402 IPO7O95373 1038 aaKnown RBP30.26■■■□□ 2.43
SPIRE1-202ENST00000409402 PPP1R1BQ9UD71 204 aaPredicted RBP30.26■■■□□ 2.43
SPIRE1-202ENST00000409402 ANO8Q9HCE9 1232 aaPredicted RBP30.25■■■□□ 2.43
SPIRE1-202ENST00000409402 ATAD2Q6PL18 1390 aa30.25■■■□□ 2.43
SPIRE1-202ENST00000409402 DAPK1P53355 1430 aa30.25■■■□□ 2.43
SPIRE1-202ENST00000409402 SLC3A2P08195 630 aaKnown RBP30.25■■■□□ 2.43
SPIRE1-202ENST00000409402 FOSBP53539 338 aa30.24■■■□□ 2.43
SPIRE1-202ENST00000409402 PRXQ9BXM0 1461 aa30.24■■■□□ 2.43
SPIRE1-202ENST00000409402 GNAI2P04899 355 aa30.23■■■□□ 2.43
SPIRE1-202ENST00000409402 HIP1O00291 1037 aa30.23■■■□□ 2.43
SPIRE1-202ENST00000409402 CCDC158Q5M9N0 1113 aa30.22■■■□□ 2.43
SPIRE1-202ENST00000409402 TTC39AQ5SRH9 613 aa30.22■■■□□ 2.43
SPIRE1-202ENST00000409402 SLC4A2P04920 1241 aa30.22■■■□□ 2.43
SPIRE1-202ENST00000409402 MTMR7Q9Y216 660 aa30.22■■■□□ 2.43
SPIRE1-202ENST00000409402 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP30.21■■■□□ 2.43
SPIRE1-202ENST00000409402 CHMP5Q9NZZ3 219 aa30.21■■■□□ 2.43
SPIRE1-202ENST00000409402 NUCB2P80303 420 aa30.2■■■□□ 2.43
SPIRE1-202ENST00000409402 CCDC73Q6ZRK6 1079 aa30.2■■■□□ 2.42
SPIRE1-202ENST00000409402 C22orf23Q9BZE7 217 aa30.2■■■□□ 2.42
SPIRE1-202ENST00000409402 SUPT6HQ7KZ85 1726 aaKnown RBP30.19■■■□□ 2.42
SPIRE1-202ENST00000409402 CCDC70Q6NSX1 233 aa30.18■■■□□ 2.42
SPIRE1-202ENST00000409402 CD109Q6YHK3 1445 aa30.18■■■□□ 2.42
SPIRE1-202ENST00000409402 CNKSR2Q8WXI2 1034 aa30.18■■■□□ 2.42
SPIRE1-202ENST00000409402 CCT4P50991 539 aaKnown RBP30.17■■■□□ 2.42
SPIRE1-202ENST00000409402 ARID3AQ99856 593 aa30.17■■■□□ 2.42
SPIRE1-202ENST00000409402 XPCQ01831 940 aaPredicted RBP30.16■■■□□ 2.42
SPIRE1-202ENST00000409402 DDX24Q9GZR7 859 aaKnown RBP eCLIP30.15■■■□□ 2.42
SPIRE1-202ENST00000409402 HMGB2P26583 209 aaKnown RBP30.15■■■□□ 2.42
SPIRE1-202ENST00000409402 CCAR2Q8N163 923 aaKnown RBP30.15■■■□□ 2.42
SPIRE1-202ENST00000409402 SASS6Q6UVJ0 657 aa30.14■■■□□ 2.42
SPIRE1-202ENST00000409402 ZSCAN21Q9Y5A6 473 aaPredicted RBP30.14■■■□□ 2.42
SPIRE1-202ENST00000409402 SRCIN1Q9C0H9 1055 aa30.14■■■□□ 2.42
SPIRE1-202ENST00000409402 KCNH5Q8NCM2 988 aa30.14■■■□□ 2.42
SPIRE1-202ENST00000409402 NOB1Q9ULX3 412 aaKnown RBP30.13■■■□□ 2.41
SPIRE1-202ENST00000409402 MYL6BP14649 208 aa30.13■■■□□ 2.41
SPIRE1-202ENST00000409402 TSR2Q969E8 191 aaKnown RBP30.13■■■□□ 2.41
SPIRE1-202ENST00000409402 NUDT16Q96DE0 195 aaKnown RBP30.12■■■□□ 2.41
SPIRE1-202ENST00000409402 CCAR1Q8IX12 1150 aaKnown RBP30.12■■■□□ 2.41
SPIRE1-202ENST00000409402 R3HCC1Q9Y3T6 440 aaKnown RBP30.12■■■□□ 2.41
SPIRE1-202ENST00000409402 TIAM1Q13009 1591 aa30.12■■■□□ 2.41
SPIRE1-202ENST00000409402 EPRSP07814 1512 aaKnown RBP30.12■■■□□ 2.41
SPIRE1-202ENST00000409402 RRS1Q15050 365 aaKnown RBP30.11■■■□□ 2.41
SPIRE1-202ENST00000409402 GCC1Q96CN9 775 aa30.11■■■□□ 2.41
SPIRE1-202ENST00000409402 MPHOSPH8Q99549 860 aa30.11■■■□□ 2.41
SPIRE1-202ENST00000409402 CDCA7LQ96GN5 454 aa30.1■■■□□ 2.41
SPIRE1-202ENST00000409402 BTBD11A6QL63 1104 aa30.1■■■□□ 2.41
SPIRE1-202ENST00000409402 IQGAP2Q13576 1575 aa30.1■■■□□ 2.41
SPIRE1-202ENST00000409402 CCDC61Q9Y6R9 512 aa30.1■■■□□ 2.41
SPIRE1-202ENST00000409402 CCDC141Q6ZP82 1450 aa30.1■■■□□ 2.41
SPIRE1-202ENST00000409402 ZC3H6P61129 1189 aaKnown RBP30.09■■■□□ 2.41
SPIRE1-202ENST00000409402 NBPF8Q3BBV2 869 aa30.09■■■□□ 2.41
SPIRE1-202ENST00000409402 CDK13Q14004 1512 aaKnown RBP30.09■■■□□ 2.41
SPIRE1-202ENST00000409402 CCDC57Q2TAC2 916 aa30.09■■■□□ 2.41
SPIRE1-202ENST00000409402 MAGI1Q96QZ7 1491 aaPredicted RBP30.08■■■□□ 2.41
SPIRE1-202ENST00000409402 WDR63Q8IWG1 891 aa30.08■■■□□ 2.41
SPIRE1-202ENST00000409402 CT47B1P0C2W7 299 aaPredicted RBP30.08■■■□□ 2.41
SPIRE1-202ENST00000409402 RRP12Q5JTH9 1297 aaKnown RBP30.08■■■□□ 2.41
SPIRE1-202ENST00000409402 C1orf115Q9H7X2 142 aa30.08■■■□□ 2.41
SPIRE1-202ENST00000409402 LAMC3Q9Y6N6 1575 aa30.07■■■□□ 2.41
SPIRE1-202ENST00000409402 ARHGEF11O15085 1522 aa30.07■■■□□ 2.4
SPIRE1-202ENST00000409402 PDE3AQ14432 1141 aa30.05■■■□□ 2.4
SPIRE1-202ENST00000409402 NACAP1Q9BZK3 213 aa30.05■■■□□ 2.4
SPIRE1-202ENST00000409402 ABCA10Q8WWZ4 1543 aa30.04■■■□□ 2.4
SPIRE1-202ENST00000409402 SIL1Q9H173 461 aa30.04■■■□□ 2.4
SPIRE1-202ENST00000409402 KDM4AO75164 1064 aa30.03■■■□□ 2.4
SPIRE1-202ENST00000409402 FCHSD2O94868 740 aa30.03■■■□□ 2.4
SPIRE1-202ENST00000409402 OLFM4Q6UX06 510 aa30.02■■■□□ 2.4
SPIRE1-202ENST00000409402 LRRCC1Q9C099 1032 aa30.02■■■□□ 2.4
SPIRE1-202ENST00000409402 ADGRL1O94910 1474 aa30.02■■■□□ 2.4
SPIRE1-202ENST00000409402 ZSCAN25Q6NSZ9 544 aa30.01■■■□□ 2.39
SPIRE1-202ENST00000409402 EPS15P42566 896 aa30■■■□□ 2.39
SPIRE1-202ENST00000409402 STARD3NLO95772 234 aa30■■■□□ 2.39
SPIRE1-202ENST00000409402 GNAT3A8MTJ3 354 aa29.99■■■□□ 2.39
SPIRE1-202ENST00000409402 GSE1Q14687 1217 aa29.99■■■□□ 2.39
SPIRE1-202ENST00000409402 ATP2B2Q01814 1243 aa29.99■■■□□ 2.39
SPIRE1-202ENST00000409402 RBM5P52756 815 aaKnown RBP eCLIP29.98■■■□□ 2.39
SPIRE1-202ENST00000409402 KRI1Q8N9T8 703 aaKnown RBP29.98■■■□□ 2.39
SPIRE1-202ENST00000409402 PDZRN3Q9UPQ7 1066 aa29.98■■■□□ 2.39
SPIRE1-202ENST00000409402 ZNF592Q92610 1267 aa29.98■■■□□ 2.39
SPIRE1-202ENST00000409402 CT47A1Q5JQC4 288 aaPredicted RBP29.98■■■□□ 2.39
SPIRE1-202ENST00000409402 NAT10Q9H0A0 1025 aaKnown RBP29.98■■■□□ 2.39
SPIRE1-202ENST00000409402 MCM2P49736 904 aa29.97■■■□□ 2.39
SPIRE1-202ENST00000409402 CDK5RAP3Q96JB5 506 aa29.97■■■□□ 2.39
SPIRE1-202ENST00000409402 HOMER1Q86YM7 354 aa29.97■■■□□ 2.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms