RNA–Protein interactions for RNA: ENST00000409368.5

SUMO1-206, Transcript of small ubiquitin-like modifier 1, humanhuman

TSL 4 BASIC

Gene SUMO1, Length 1,187 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SUMO1-206ENST00000409368 ATRNO75882 1429 aa18.47■□□□□ 0.55
SUMO1-206ENST00000409368 RXRBP28702 533 aa18.46■□□□□ 0.55
SUMO1-206ENST00000409368 QTRT2Q9H974 415 aaKnown RBP18.45■□□□□ 0.54
SUMO1-206ENST00000409368 PPIP5K1Q6PFW1 1433 aa18.45■□□□□ 0.54
SUMO1-206ENST00000409368 ACEP12821 1306 aa18.45■□□□□ 0.54
SUMO1-206ENST00000409368 EVC2Q86UK5 1308 aa18.45■□□□□ 0.54
SUMO1-206ENST00000409368 RBM6P78332 1123 aaKnown RBP18.44■□□□□ 0.54
SUMO1-206ENST00000409368 USP21Q9UK80 565 aa18.44■□□□□ 0.54
SUMO1-206ENST00000409368 CARD11Q9BXL7 1154 aa18.43■□□□□ 0.54
SUMO1-206ENST00000409368 TRPC5Q9UL62 973 aaPredicted RBP18.43■□□□□ 0.54
SUMO1-206ENST00000409368 PLCH1Q4KWH8 1693 aa18.43■□□□□ 0.54
SUMO1-206ENST00000409368 SRPK2P78362 688 aaKnown RBP18.42■□□□□ 0.54
SUMO1-206ENST00000409368 CABP2Q9NPB3 220 aa18.42■□□□□ 0.54
SUMO1-206ENST00000409368 SSH2Q76I76 1423 aa18.41■□□□□ 0.54
SUMO1-206ENST00000409368 PHRF1Q9P1Y6 1649 aaKnown RBP18.41■□□□□ 0.54
SUMO1-206ENST00000409368 AKAP12Q02952 1782 aa18.4■□□□□ 0.54
SUMO1-206ENST00000409368 CABLES1Q8TDN4 633 aa18.4■□□□□ 0.54
SUMO1-206ENST00000409368 COL14A1Q05707 1796 aaKnown RBP18.4■□□□□ 0.54
SUMO1-206ENST00000409368 RGS12O14924 1447 aa18.4■□□□□ 0.54
SUMO1-206ENST00000409368 PUS7Q96PZ0 661 aaKnown RBP18.39■□□□□ 0.53
SUMO1-206ENST00000409368 NRAPQ86VF7 1730 aa18.39■□□□□ 0.53
SUMO1-206ENST00000409368 ATAD2Q6PL18 1390 aa18.39■□□□□ 0.53
SUMO1-206ENST00000409368 USP6P35125 1406 aa18.39■□□□□ 0.53
SUMO1-206ENST00000409368 UNC5CLQ8IV45 518 aa18.38■□□□□ 0.53
SUMO1-206ENST00000409368 PCGF6Q9BYE7 350 aa18.38■□□□□ 0.53
SUMO1-206ENST00000409368 CPSF1Q10570 1443 aaKnown RBP18.38■□□□□ 0.53
SUMO1-206ENST00000409368 KCNA4P22459 653 aa18.37■□□□□ 0.53
SUMO1-206ENST00000409368 LMOD2Q6P5Q4 547 aa18.37■□□□□ 0.53
SUMO1-206ENST00000409368 CABP1Q9NZU7 370 aa18.37■□□□□ 0.53
SUMO1-206ENST00000409368 USP19O94966 1318 aa18.37■□□□□ 0.53
SUMO1-206ENST00000409368 GLI3P10071 1580 aa18.36■□□□□ 0.53
SUMO1-206ENST00000409368 NRKQ7Z2Y5 1582 aa18.35■□□□□ 0.53
SUMO1-206ENST00000409368 FAM83GA6ND36 823 aa18.35■□□□□ 0.53
SUMO1-206ENST00000409368 SLC24A1O60721 1099 aa18.35■□□□□ 0.53
SUMO1-206ENST00000409368 MON2Q7Z3U7 1717 aa18.35■□□□□ 0.53
SUMO1-206ENST00000409368 PAK3O75914 559 aaPredicted RBP18.34■□□□□ 0.53
SUMO1-206ENST00000409368 HAP1P54257 671 aaPredicted RBP18.34■□□□□ 0.53
SUMO1-206ENST00000409368 GJD4Q96KN9 370 aaPredicted RBP18.34■□□□□ 0.53
SUMO1-206ENST00000409368 TESK2Q96S53 571 aa18.34■□□□□ 0.53
SUMO1-206ENST00000409368 ZNF692Q9BU19 519 aaPredicted RBP18.34■□□□□ 0.53
SUMO1-206ENST00000409368 VPS72Q15906 364 aa18.33■□□□□ 0.52
SUMO1-206ENST00000409368 PIK3C2AO00443 1686 aa18.33■□□□□ 0.52
SUMO1-206ENST00000409368 CPDO75976 1380 aa18.32■□□□□ 0.52
SUMO1-206ENST00000409368 SLIT3O75094 1523 aa18.32■□□□□ 0.52
SUMO1-206ENST00000409368 CD163L1Q9NR16 1453 aa18.32■□□□□ 0.52
SUMO1-206ENST00000409368 USP54Q70EL1 1684 aa18.31■□□□□ 0.52
SUMO1-206ENST00000409368 ONECUT3O60422 494 aaPredicted RBP18.31■□□□□ 0.52
SUMO1-206ENST00000409368 EP400Q96L91 3159 aa18.31■□□□□ 0.52
SUMO1-206ENST00000409368 ABTB2Q8N961 1025 aa18.3■□□□□ 0.52
SUMO1-206ENST00000409368 LMO7Q8WWI1 1683 aa18.3■□□□□ 0.52
SUMO1-206ENST00000409368 ST20-MTHFSA0A0A6YYL1 179 aa18.29■□□□□ 0.52
SUMO1-206ENST00000409368 NLRP13Q86W25 1043 aa18.29■□□□□ 0.52
SUMO1-206ENST00000409368 KIAA0232Q92628 1395 aa18.29■□□□□ 0.52
SUMO1-206ENST00000409368 NINLQ9Y2I6 1382 aa18.29■□□□□ 0.52
SUMO1-206ENST00000409368 TTC21AQ8NDW8 1320 aa18.28■□□□□ 0.52
SUMO1-206ENST00000409368 CACNB1Q02641 598 aaPredicted RBP18.28■□□□□ 0.52
SUMO1-206ENST00000409368 UPF1Q92900 1129 aaKnown RBP eCLIP18.27■□□□□ 0.52
SUMO1-206ENST00000409368 USP47Q96K76 1375 aa18.27■□□□□ 0.51
SUMO1-206ENST00000409368 TTC21BQ7Z4L5 1316 aa18.26■□□□□ 0.51
SUMO1-206ENST00000409368 PRDM11Q9NQV5 511 aa18.26■□□□□ 0.51
SUMO1-206ENST00000409368 BTG4Q9NY30 223 aa18.26■□□□□ 0.51
SUMO1-206ENST00000409368 GCP02774 474 aa18.25■□□□□ 0.51
SUMO1-206ENST00000409368 KTN1Q86UP2 1357 aaKnown RBP18.25■□□□□ 0.51
SUMO1-206ENST00000409368 BRWD3Q6RI45 1802 aa18.25■□□□□ 0.51
SUMO1-206ENST00000409368 NUTM2GQ5VZR2 741 aa18.24■□□□□ 0.51
SUMO1-206ENST00000409368 USP31Q70CQ4 1352 aa18.24■□□□□ 0.51
SUMO1-206ENST00000409368 COL18A1P39060 1754 aa18.24■□□□□ 0.51
SUMO1-206ENST00000409368 CAMTA1Q9Y6Y1 1673 aa18.23■□□□□ 0.51
SUMO1-206ENST00000409368 SPATA31A5Q5VU36 1347 aa18.23■□□□□ 0.51
SUMO1-206ENST00000409368 SPATA31A7Q8IWB4 1347 aa18.23■□□□□ 0.51
SUMO1-206ENST00000409368 THSD7AQ9UPZ6 1657 aa18.22■□□□□ 0.51
SUMO1-206ENST00000409368 NLRP6P59044 892 aa18.22■□□□□ 0.51
SUMO1-206ENST00000409368 NCBP3Q53F19 620 aaKnown RBP18.22■□□□□ 0.51
SUMO1-206ENST00000409368 EDC4Q6P2E9 1401 aaKnown RBP18.22■□□□□ 0.51
SUMO1-206ENST00000409368 AATKQ6ZMQ8 1374 aa18.21■□□□□ 0.51
SUMO1-206ENST00000409368 PLEKHG5O94827 1062 aa18.21■□□□□ 0.51
SUMO1-206ENST00000409368 ZC3H6P61129 1189 aaKnown RBP18.21■□□□□ 0.51
SUMO1-206ENST00000409368 NFAT5O94916 1531 aa18.21■□□□□ 0.51
SUMO1-206ENST00000409368 ABCC6O95255 1503 aa18.21■□□□□ 0.51
SUMO1-206ENST00000409368 A0A1W2PP64 1363 aa18.2■□□□□ 0.5
SUMO1-206ENST00000409368 CCER1Q8TC90 406 aaPredicted RBP18.2■□□□□ 0.5
SUMO1-206ENST00000409368 SLC12A5Q9H2X9 1139 aa18.2■□□□□ 0.5
SUMO1-206ENST00000409368 TERF2IPQ9NYB0 399 aa18.19■□□□□ 0.5
SUMO1-206ENST00000409368 TMF1P82094 1093 aa18.18■□□□□ 0.5
SUMO1-206ENST00000409368 CHRNA2Q15822 529 aa18.18■□□□□ 0.5
SUMO1-206ENST00000409368 HDGFL2Q7Z4V5 671 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-206ENST00000409368 SEPT12Q8IYM1 358 aa18.18■□□□□ 0.5
SUMO1-206ENST00000409368 KCNH5Q8NCM2 988 aa18.18■□□□□ 0.5
SUMO1-206ENST00000409368 COL5A2P05997 1499 aaPredicted RBP18.18■□□□□ 0.5
SUMO1-206ENST00000409368 SPATA31A1Q5TZJ5 1347 aa18.18■□□□□ 0.5
SUMO1-206ENST00000409368 ARHGEF25Q86VW2 580 aa18.16■□□□□ 0.5
SUMO1-206ENST00000409368 ANKRD36BQ8N2N9 1353 aa18.16■□□□□ 0.5
SUMO1-206ENST00000409368 OVOS2A0A0J9YW53 1432 aa18.15■□□□□ 0.5
SUMO1-206ENST00000409368 OVOS2Q6IE36 1432 aa18.15■□□□□ 0.5
SUMO1-206ENST00000409368 CDCA8Q53HL2 280 aa18.15■□□□□ 0.5
SUMO1-206ENST00000409368 CCDC125Q86Z20 511 aa18.15■□□□□ 0.5
SUMO1-206ENST00000409368 TMC1Q8TDI8 760 aa18.15■□□□□ 0.5
SUMO1-206ENST00000409368 MYOM1P52179 1685 aa18.15■□□□□ 0.5
SUMO1-206ENST00000409368 BARGINQ6ZT62 677 aa18.14■□□□□ 0.49
SUMO1-206ENST00000409368 CCDC9Q9Y3X0 531 aaKnown RBP18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 114.3 ms