RNA–Protein interactions for RNA: ENST00000409292.5

LSM5-202, Transcript of LSM5 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2 BASIC

Gene LSM5, Length 538 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM5-202ENST00000409292 ABCC11Q96J66 1382 aa11.49□□□□□ -0.57
LSM5-202ENST00000409292 A0A0G2JS52 829 aa11.48□□□□□ -0.57
LSM5-202ENST00000409292 MYT1Q01538 1121 aa11.48□□□□□ -0.57
LSM5-202ENST00000409292 WAPLQ7Z5K2 1190 aa11.48□□□□□ -0.57
LSM5-202ENST00000409292 SPATA31A3Q5VYP0 1347 aa11.48□□□□□ -0.57
LSM5-202ENST00000409292 BLMP54132 1417 aaPredicted RBP11.48□□□□□ -0.57
LSM5-202ENST00000409292 PPLO60437 1756 aa11.48□□□□□ -0.57
LSM5-202ENST00000409292 BCL9LQ86UU0 1499 aa11.47□□□□□ -0.57
LSM5-202ENST00000409292 PXDNQ92626 1479 aa11.47□□□□□ -0.57
LSM5-202ENST00000409292 ADGRF5Q8IZF2 1346 aa11.47□□□□□ -0.57
LSM5-202ENST00000409292 POTEIP0CG38 1075 aa11.47□□□□□ -0.57
LSM5-202ENST00000409292 SIRT1Q96EB6 747 aa11.47□□□□□ -0.57
LSM5-202ENST00000409292 TECPR2O15040 1411 aa11.46□□□□□ -0.57
LSM5-202ENST00000409292 DHX57Q6P158 1386 aaKnown RBP11.46□□□□□ -0.57
LSM5-202ENST00000409292 PHF8Q9UPP1 1060 aa11.46□□□□□ -0.57
LSM5-202ENST00000409292 CCDC61Q9Y6R9 512 aa11.46□□□□□ -0.57
LSM5-202ENST00000409292 KIF1AQ12756 1690 aa11.46□□□□□ -0.58
LSM5-202ENST00000409292 ARHGEF10O15013 1369 aa11.45□□□□□ -0.58
LSM5-202ENST00000409292 VPS72Q15906 364 aa11.45□□□□□ -0.58
LSM5-202ENST00000409292 TMEM132EQ6IEE7 984 aa11.45□□□□□ -0.58
LSM5-202ENST00000409292 SEPT12Q8IYM1 358 aa11.45□□□□□ -0.58
LSM5-202ENST00000409292 POGKQ9P215 609 aa11.45□□□□□ -0.58
LSM5-202ENST00000409292 MARF1Q9Y4F3 1742 aaKnown RBP11.45□□□□□ -0.58
LSM5-202ENST00000409292 RALGAPBQ86X10 1494 aa11.44□□□□□ -0.58
LSM5-202ENST00000409292 BAG6P46379 1132 aa11.44□□□□□ -0.58
LSM5-202ENST00000409292 KRT27Q7Z3Y8 459 aa11.44□□□□□ -0.58
LSM5-202ENST00000409292 MPHOSPH9Q99550 1183 aa11.44□□□□□ -0.58
LSM5-202ENST00000409292 YTHDC2Q9H6S0 1430 aaKnown RBP11.43□□□□□ -0.58
LSM5-202ENST00000409292 TNKS1BP1Q9C0C2 1729 aaKnown RBP11.43□□□□□ -0.58
LSM5-202ENST00000409292 EIF3AQ14152 1382 aaKnown RBP11.43□□□□□ -0.58
LSM5-202ENST00000409292 RASEFQ8IZ41 740 aa11.43□□□□□ -0.58
LSM5-202ENST00000409292 SLIT2O94813 1529 aa11.43□□□□□ -0.58
LSM5-202ENST00000409292 TNS3Q68CZ2 1445 aa11.43□□□□□ -0.58
LSM5-202ENST00000409292 SBNO1A3KN83 1393 aa11.41□□□□□ -0.58
LSM5-202ENST00000409292 GPRASP1Q5JY77 1395 aa11.41□□□□□ -0.58
LSM5-202ENST00000409292 KNDC1Q76NI1 1749 aa11.41□□□□□ -0.58
LSM5-202ENST00000409292 C14orf93Q9H972 538 aaKnown RBP11.41□□□□□ -0.58
LSM5-202ENST00000409292 USP32Q8NFA0 1604 aa11.41□□□□□ -0.58
LSM5-202ENST00000409292 PIK3C2GO75747 1445 aa11.41□□□□□ -0.58
LSM5-202ENST00000409292 PLEKHH1Q9ULM0 1364 aa11.41□□□□□ -0.58
LSM5-202ENST00000409292 FMN2Q9NZ56 1722 aa11.4□□□□□ -0.58
LSM5-202ENST00000409292 DEFB132Q7Z7B7 95 aa11.4□□□□□ -0.58
LSM5-202ENST00000409292 CABLES1Q8TDN4 633 aa11.4□□□□□ -0.58
LSM5-202ENST00000409292 MS4A3Q96HJ5 214 aa11.4□□□□□ -0.58
LSM5-202ENST00000409292 PRAM1Q96QH2 718 aa11.4□□□□□ -0.58
LSM5-202ENST00000409292 SPATA31E1Q6ZUB1 1445 aa11.4□□□□□ -0.58
LSM5-202ENST00000409292 ONECUT3O60422 494 aaPredicted RBP11.39□□□□□ -0.59
LSM5-202ENST00000409292 NUBP1P53384 320 aa11.39□□□□□ -0.59
LSM5-202ENST00000409292 SAFB2Q14151 953 aaKnown RBP eCLIP11.39□□□□□ -0.59
LSM5-202ENST00000409292 LHX8Q68G74 356 aa11.39□□□□□ -0.59
LSM5-202ENST00000409292 GLI3P10071 1580 aa11.38□□□□□ -0.59
LSM5-202ENST00000409292 ANKARQ7Z5J8 1434 aa11.38□□□□□ -0.59
LSM5-202ENST00000409292 PMFBP1Q8TBY8 1022 aa11.38□□□□□ -0.59
LSM5-202ENST00000409292 KIF12Q96FN5 646 aa11.38□□□□□ -0.59
LSM5-202ENST00000409292 VASPP50552 380 aaPredicted RBP11.37□□□□□ -0.59
LSM5-202ENST00000409292 CFAP70Q5T0N1 1121 aa11.37□□□□□ -0.59
LSM5-202ENST00000409292 NGDNQ8NEJ9 315 aaKnown RBP11.37□□□□□ -0.59
LSM5-202ENST00000409292 FAM212AQ96EL1 285 aa11.37□□□□□ -0.59
LSM5-202ENST00000409292 BTG4Q9NY30 223 aa11.37□□□□□ -0.59
LSM5-202ENST00000409292 NWD2Q9ULI1 1742 aa11.37□□□□□ -0.59
LSM5-202ENST00000409292 NRXN1Q9ULB1 1477 aa11.37□□□□□ -0.59
LSM5-202ENST00000409292 FAM98CQ17RN3 349 aaKnown RBP11.36□□□□□ -0.59
LSM5-202ENST00000409292 IFT172Q9UG01 1749 aa11.35□□□□□ -0.59
LSM5-202ENST00000409292 FAM83GA6ND36 823 aa11.35□□□□□ -0.59
LSM5-202ENST00000409292 STAC3Q96MF2 364 aa11.35□□□□□ -0.59
LSM5-202ENST00000409292 PRDM11Q9NQV5 511 aa11.35□□□□□ -0.59
LSM5-202ENST00000409292 PSDA5PKW4 1024 aaPredicted RBP11.33□□□□□ -0.6
LSM5-202ENST00000409292 TRAK1Q9UPV9 953 aa11.33□□□□□ -0.6
LSM5-202ENST00000409292 DLC1Q96QB1 1528 aa11.33□□□□□ -0.6
LSM5-202ENST00000409292 PLCH1Q4KWH8 1693 aa11.33□□□□□ -0.6
LSM5-202ENST00000409292 MINK1Q8N4C8 1332 aaPredicted RBP11.33□□□□□ -0.6
LSM5-202ENST00000409292 BRWD3Q6RI45 1802 aa11.32□□□□□ -0.6
LSM5-202ENST00000409292 WASLO00401 505 aaPredicted RBP11.31□□□□□ -0.6
LSM5-202ENST00000409292 MAP3K13O43283 966 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 HRCP23327 699 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 EVA1CP58658 441 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 EN1Q05925 392 aaPredicted RBP11.31□□□□□ -0.6
LSM5-202ENST00000409292 ASTLQ6HA08 431 aaPredicted RBP11.31□□□□□ -0.6
LSM5-202ENST00000409292 FAM196AQ6ZSG2 479 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 SGIP1Q9BQI5 828 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 HIRIP3Q9BW71 556 aaPredicted RBP11.31□□□□□ -0.6
LSM5-202ENST00000409292 SPATA31A5Q5VU36 1347 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 SPATA31A7Q8IWB4 1347 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 LRP5O75197 1615 aa11.31□□□□□ -0.6
LSM5-202ENST00000409292 PDE3BQ13370 1112 aa11.3□□□□□ -0.6
LSM5-202ENST00000409292 NBPF8Q3BBV2 869 aa11.3□□□□□ -0.6
LSM5-202ENST00000409292 NBPF14Q5TI25 921 aa11.3□□□□□ -0.6
LSM5-202ENST00000409292 KLHL34Q8N239 644 aa11.3□□□□□ -0.6
LSM5-202ENST00000409292 KDM2AQ9Y2K7 1162 aa11.3□□□□□ -0.6
LSM5-202ENST00000409292 RGPD8O14715 1765 aaPredicted RBP11.3□□□□□ -0.6
LSM5-202ENST00000409292 COL14A1Q05707 1796 aaKnown RBP11.3□□□□□ -0.6
LSM5-202ENST00000409292 R3HDM1Q15032 1099 aaKnown RBP11.29□□□□□ -0.6
LSM5-202ENST00000409292 DCAF11Q8TEB1 546 aa11.29□□□□□ -0.6
LSM5-202ENST00000409292 STRN4Q9NRL3 753 aa11.29□□□□□ -0.6
LSM5-202ENST00000409292 ADGRB2O60241 1585 aa11.28□□□□□ -0.6
LSM5-202ENST00000409292 C11orf95C9JLR9 678 aaPredicted RBP11.28□□□□□ -0.6
LSM5-202ENST00000409292 RGPD1P0DJD0 1748 aa11.28□□□□□ -0.6
LSM5-202ENST00000409292 TULP4Q9NRJ4 1543 aa11.28□□□□□ -0.6
LSM5-202ENST00000409292 PARD3Q8TEW0 1356 aa11.28□□□□□ -0.6
LSM5-202ENST00000409292 ABCA3Q99758 1704 aa11.27□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 53.2 ms