RNA–Protein interactions for RNA: ENST00000409101.7

SCN3A-203, Transcript of sodium voltage-gated channel alpha subunit 3, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SCN3A, Length 6,599 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3A-203ENST00000409101 WDHD1O75717 1129 aaPredicted RBP6.13□□□□□ -1.43
SCN3A-203ENST00000409101 DZIP1LQ8IYY4 767 aaKnown RBP6.13□□□□□ -1.43
SCN3A-203ENST00000409101 CCDC61Q9Y6R9 512 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 RRS1Q15050 365 aaKnown RBP6.13□□□□□ -1.43
SCN3A-203ENST00000409101 NCKAP5LQ9HCH0 1330 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 ZKSCAN1P17029 563 aaPredicted RBP6.13□□□□□ -1.43
SCN3A-203ENST00000409101 SLC12A5Q9H2X9 1139 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 RNF20Q5VTR2 975 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 MPHOSPH8Q99549 860 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 NBPF1Q3BBV0 1214 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 CCDC158Q5M9N0 1113 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 GBP4Q96PP9 640 aa6.13□□□□□ -1.43
SCN3A-203ENST00000409101 DHX29Q7Z478 1369 aaKnown RBP6.12□□□□□ -1.43
SCN3A-203ENST00000409101 CPLX1O14810 134 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 HSPA2P54652 639 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 PEG3Q9GZU2 1588 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 PCF11O94913 1555 aaKnown RBP6.12□□□□□ -1.43
SCN3A-203ENST00000409101 NBPF8Q3BBV2 869 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 NBPF14Q5TI25 921 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 SYAP1Q96A49 352 aaPredicted RBP6.12□□□□□ -1.43
SCN3A-203ENST00000409101 IGHMBP2P38935 993 aaKnown RBP6.12□□□□□ -1.43
SCN3A-203ENST00000409101 SLC4A3P48751 1232 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 HDGFL1Q5TGJ6 251 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 CEP89Q96ST8 783 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 PRKRIP1Q9H875 184 aaPredicted RBP6.12□□□□□ -1.43
SCN3A-203ENST00000409101 KIF7Q2M1P5 1343 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 TPM2P07951 284 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 TMOD2Q9NZR1 351 aa6.12□□□□□ -1.43
SCN3A-203ENST00000409101 CCDC47Q96A33 483 aaKnown RBP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 MTMR7Q9Y216 660 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 CCDC7Q96M83 1385 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 UHRF1BP1Q6BDS2 1440 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 GNAI3P08754 354 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 MPRIPQ6WCQ1 1025 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 ERC1Q8IUD2 1116 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 RPGRQ92834 1020 aaKnown RBP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 GNAT3A8MTJ3 354 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 WASLO00401 505 aaPredicted RBP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 TPD52L1Q16890 204 aaPredicted RBP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 CCDC57Q2TAC2 916 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 AMOTQ4VCS5 1084 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 WWC2Q6AWC2 1192 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 RALYLQ86SE5 291 aaKnown RBP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 DNAJC2Q99543 621 aaKnown RBP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 NINLQ9Y2I6 1382 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 ZNF518AQ6AHZ1 1483 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 PHF14O94880 888 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 IDI1Q13907 227 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 ERICH6BQ5W0A0 696 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 C16orf71Q8IYS4 520 aaPredicted RBP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 DDX24Q9GZR7 859 aaKnown RBP eCLIP6.11□□□□□ -1.43
SCN3A-203ENST00000409101 COG6Q9Y2V7 657 aa6.11□□□□□ -1.43
SCN3A-203ENST00000409101 UHRF1BP1LA0JNW5 1464 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 POLD1P28340 1107 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 TTLL12Q14166 644 aaPredicted RBP6.1□□□□□ -1.43
SCN3A-203ENST00000409101 PPP2R1AP30153 589 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 MCTP1Q6DN14 999 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 ZSCAN29Q8IWY8 852 aaPredicted RBP6.1□□□□□ -1.43
SCN3A-203ENST00000409101 PLCH2O75038 1416 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 A0A087WZG4 1122 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 BRMS1Q9HCU9 246 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 NPHP3Q7Z494 1330 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 RAPGEF6Q8TEU7 1601 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 NOC3LQ8WTT2 800 aaKnown RBP6.1□□□□□ -1.43
SCN3A-203ENST00000409101 ATP2B2Q01814 1243 aa6.1□□□□□ -1.43
SCN3A-203ENST00000409101 SART3Q15020 963 aaKnown RBP6.1□□□□□ -1.43
SCN3A-203ENST00000409101 TWISTNBQ3B726 338 aaPredicted RBP6.1□□□□□ -1.43
SCN3A-203ENST00000409101 TMEM132AQ24JP5 1023 aa6.09□□□□□ -1.43
SCN3A-203ENST00000409101 PDE4CQ08493 712 aa6.09□□□□□ -1.43
SCN3A-203ENST00000409101 FSD1Q9BTV5 496 aa6.09□□□□□ -1.43
SCN3A-203ENST00000409101 PTPN23Q9H3S7 1636 aa6.09□□□□□ -1.43
SCN3A-203ENST00000409101 ZNF219Q9P2Y4 722 aaPredicted RBP6.09□□□□□ -1.43
SCN3A-203ENST00000409101 KDM5BQ9UGL1 1544 aa6.09□□□□□ -1.43
SCN3A-203ENST00000409101 PES1O00541 588 aaKnown RBP6.09□□□□□ -1.43
SCN3A-203ENST00000409101 REC8O95072 547 aa6.09□□□□□ -1.43
SCN3A-203ENST00000409101 RFC4P35249 363 aa6.09□□□□□ -1.43
SCN3A-203ENST00000409101 ST5P78524 1137 aa6.09□□□□□ -1.44
SCN3A-203ENST00000409101 USHBP1Q8N6Y0 703 aa6.09□□□□□ -1.44
SCN3A-203ENST00000409101 FOXD4L1Q9NU39 408 aa6.09□□□□□ -1.44
SCN3A-203ENST00000409101 R3HCC1Q9Y3T6 440 aaKnown RBP6.09□□□□□ -1.44
SCN3A-203ENST00000409101 PTCD1O75127 700 aaKnown RBP6.09□□□□□ -1.44
SCN3A-203ENST00000409101 SLC4A2P04920 1241 aa6.09□□□□□ -1.44
SCN3A-203ENST00000409101 SAFBQ15424 915 aaKnown RBP eCLIP6.09□□□□□ -1.44
SCN3A-203ENST00000409101 TCP11L2Q8N4U5 519 aa6.09□□□□□ -1.44
SCN3A-203ENST00000409101 ANKIB1Q9P2G1 1089 aa6.09□□□□□ -1.44
SCN3A-203ENST00000409101 CENPQQ7L2Z9 268 aaPredicted RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 CNTROBQ8N137 903 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 ABCC5O15440 1437 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 A2MP01023 1474 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 KIF21AQ7Z4S6 1674 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 WDR62O43379 1518 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NOS1P29475 1434 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 XBP1P17861 261 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 CLASRPQ8N2M8 674 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 LRRC59Q96AG4 307 aaKnown RBP6.08□□□□□ -1.44
SCN3A-203ENST00000409101 HSP90AB3PQ58FF7 597 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 ZSCAN25Q6NSZ9 544 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 BIVM-ERCC5R4GMW8 1640 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 NSD3Q9BZ95 1437 aa6.08□□□□□ -1.44
SCN3A-203ENST00000409101 RIMS2Q9UQ26 1411 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms