RNA–Protein interactions for RNA: ENST00000409093.1

LRRTM4-202, Transcript of leucine rich repeat transmembrane neuronal 4, humanhuman

APPRIS P3 TSL 2 BASIC

Gene LRRTM4, Length 2,247 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM4-202ENST00000409093 AMOTL2Q9Y2J4 779 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 CCDC61Q9Y6R9 512 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 RNF123Q5XPI4 1314 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 CPSF1Q10570 1443 aaKnown RBP13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 PTCH1Q13635 1447 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 MSH5O43196 834 aa13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 EDC4Q6P2E9 1401 aaKnown RBP13.17□□□□□ -0.3
LRRTM4-202ENST00000409093 APAF1O14727 1248 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 XRN1Q8IZH2 1706 aaKnown RBP13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 RCAN3Q9UKA8 241 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 NCKAP5LQ9HCH0 1330 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 TOPAZ1Q8N9V7 1692 aa13.16□□□□□ -0.3
LRRTM4-202ENST00000409093 ZNF521Q96K83 1311 aa13.15□□□□□ -0.3
LRRTM4-202ENST00000409093 PRR36Q9H6K5 1346 aa13.15□□□□□ -0.3
LRRTM4-202ENST00000409093 GOLGA2Q08379 1002 aa13.14□□□□□ -0.31
LRRTM4-202ENST00000409093 PPP4R2Q9NY27 417 aa13.14□□□□□ -0.31
LRRTM4-202ENST00000409093 NGEFQ8N5V2 710 aa13.13□□□□□ -0.31
LRRTM4-202ENST00000409093 RUNDC1Q96C34 613 aa13.13□□□□□ -0.31
LRRTM4-202ENST00000409093 COL3A1P02461 1466 aaPredicted RBP13.13□□□□□ -0.31
LRRTM4-202ENST00000409093 FGD1P98174 961 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 ANKLE2Q86XL3 938 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 RBM19Q9Y4C8 960 aaKnown RBP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 PIK3R4Q99570 1358 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 MAP2P11137 1827 aaKnown RBP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 NUTM2FA1L443 756 aa13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 U2AF1L5P0DN76 240 aaPredicted RBP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 U2AF1Q01081 240 aaKnown RBP eCLIP13.12□□□□□ -0.31
LRRTM4-202ENST00000409093 RRP1P56182 461 aaKnown RBP13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 ZNF692Q9BU19 519 aaPredicted RBP13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 IQSEC2Q5JU85 1478 aa13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 NME9Q86XW9 330 aa13.11□□□□□ -0.31
LRRTM4-202ENST00000409093 NRKQ7Z2Y5 1582 aa13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 DUSP27Q5VZP5 1158 aa13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 NKTRP30414 1462 aaKnown RBP13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 CHD2O14647 1828 aaKnown RBP13.1□□□□□ -0.31
LRRTM4-202ENST00000409093 U2SURPO15042 1029 aaKnown RBP13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 KCNA6P17658 529 aa13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 RGPD8O14715 1765 aaPredicted RBP13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 SLFN5Q08AF3 891 aa13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 ACEP12821 1306 aa13.09□□□□□ -0.31
LRRTM4-202ENST00000409093 A0A0U1RQG5 324 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 TCP11L2Q8N4U5 519 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 COG3Q96JB2 828 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 PNPLA6Q8IY17 1366 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 PLEKHG3A1L390 1219 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 PPM1GO15355 546 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 DIAPH1O60610 1272 aaKnown RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 NEUROD2Q15784 382 aa13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 BCL11BQ9C0K0 894 aaPredicted RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 RRP7AQ9Y3A4 280 aaKnown RBP13.08□□□□□ -0.32
LRRTM4-202ENST00000409093 E9PSI1 815 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 WWC1Q8IX03 1113 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 ZMYND15Q9H091 742 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 POLKQ9UBT6 870 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 ZRANB1Q9UGI0 708 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 FBLN1P23142 703 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 ARXQ96QS3 562 aa13.07□□□□□ -0.32
LRRTM4-202ENST00000409093 USP6P35125 1406 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 B4GALNT3Q6L9W6 998 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 IL27Q8NEV9 243 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 SPINK5Q9NQ38 1064 aaPredicted RBP13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 RTN4Q9NQC3 1192 aaKnown RBP13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 AATKQ6ZMQ8 1374 aa13.06□□□□□ -0.32
LRRTM4-202ENST00000409093 TRMT2AQ8IZ69 625 aaKnown RBP13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 FMN2Q9NZ56 1722 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 TTC21BQ7Z4L5 1316 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 NALCNQ8IZF0 1738 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 DMRT2Q9Y5R5 561 aa13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 CDK12Q9NYV4 1490 aaPredicted RBP13.05□□□□□ -0.32
LRRTM4-202ENST00000409093 NPHP4O75161 1426 aaPredicted RBP13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 EMILIN1Q9Y6C2 1016 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 MAPK8IP3Q9UPT6 1336 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 ANKARQ7Z5J8 1434 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 PMFBP1Q8TBY8 1022 aa13.04□□□□□ -0.32
LRRTM4-202ENST00000409093 CCDC27Q2M243 656 aa13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 NGDNQ8NEJ9 315 aaKnown RBP13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 PLEKHF1Q96S99 279 aa13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 PHF23Q9BUL5 403 aaPredicted RBP13.03□□□□□ -0.32
LRRTM4-202ENST00000409093 OVOS2A0A0J9YW53 1432 aa13.02□□□□□ -0.32
LRRTM4-202ENST00000409093 OVOS2Q6IE36 1432 aa13.02□□□□□ -0.32
LRRTM4-202ENST00000409093 LRRC7Q96NW7 1537 aa13.02□□□□□ -0.32
LRRTM4-202ENST00000409093 PLIN1O60240 522 aa13.02□□□□□ -0.33
LRRTM4-202ENST00000409093 PNNQ9H307 717 aaKnown RBP13.02□□□□□ -0.33
LRRTM4-202ENST00000409093 RRS1Q15050 365 aaKnown RBP13.01□□□□□ -0.33
LRRTM4-202ENST00000409093 WDR63Q8IWG1 891 aa13.01□□□□□ -0.33
LRRTM4-202ENST00000409093 SSH2Q76I76 1423 aa13.01□□□□□ -0.33
LRRTM4-202ENST00000409093 TTC21AQ8NDW8 1320 aa13□□□□□ -0.33
LRRTM4-202ENST00000409093 EXOC6Q8TAG9 804 aa13□□□□□ -0.33
LRRTM4-202ENST00000409093 AAMPQ13685 434 aa13□□□□□ -0.33
LRRTM4-202ENST00000409093 FCHSD2O94868 740 aa12.99□□□□□ -0.33
LRRTM4-202ENST00000409093 TMPOP42166 694 aaKnown RBP12.99□□□□□ -0.33
LRRTM4-202ENST00000409093 NEFMP07197 916 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 GOLGA6L2Q8N9W4 650 aaPredicted RBP12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 ADGRL3Q9HAR2 1447 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 IL13P35225 146 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 RBM33Q96EV2 1170 aaKnown RBP12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 RSPH6AQ9H0K4 717 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 PIK3C2AO00443 1686 aa12.98□□□□□ -0.33
LRRTM4-202ENST00000409093 PRKAR2BP31323 418 aa12.97□□□□□ -0.33
LRRTM4-202ENST00000409093 NWD1Q149M9 1564 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms