RNA–Protein interactions for RNA: ENST00000409036.5

RAPGEF4-204, Transcript of Rap guanine nucleotide exchange factor 4, humanhuman

TSL 5 BASIC

Gene RAPGEF4, Length 3,975 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF4-204ENST00000409036 AAMPQ13685 434 aa8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 UPF2Q9HAU5 1272 aaKnown RBP8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 AATKQ6ZMQ8 1374 aa8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 RUNDC1Q96C34 613 aa8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 CDCA7LQ96GN5 454 aa8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 COL3A1P02461 1466 aaPredicted RBP8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 NKTRP30414 1462 aaKnown RBP8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 TRMT2AQ8IZ69 625 aaKnown RBP8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 ZNF692Q9BU19 519 aaPredicted RBP8.18□□□□□ -1.1
RAPGEF4-204ENST00000409036 CT47B1P0C2W7 299 aaPredicted RBP8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 SKAP1Q86WV1 359 aa8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 SLC12A5Q9H2X9 1139 aa8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 XRN1Q8IZH2 1706 aaKnown RBP8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 PNPLA6Q8IY17 1366 aa8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 WDR63Q8IWG1 891 aa8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 THEMISQ8N1K5 641 aaPredicted RBP8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 SPRYD3Q8NCJ5 442 aa8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 CDK19Q9BWU1 502 aa8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 CEP170BQ9Y4F5 1589 aaPredicted RBP8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 TBX22Q9Y458 520 aa8.17□□□□□ -1.1
RAPGEF4-204ENST00000409036 NRKQ7Z2Y5 1582 aa8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 WASLO00401 505 aaPredicted RBP8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 CCDC146Q8IYE0 955 aa8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 ANKARQ7Z5J8 1434 aa8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 CRBNQ96SW2 442 aa8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 CDK12Q9NYV4 1490 aaPredicted RBP8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 USP54Q70EL1 1684 aa8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 ADAMTSL3P82987 1691 aa8.16□□□□□ -1.1
RAPGEF4-204ENST00000409036 SLFN5Q08AF3 891 aa8.15□□□□□ -1.1
RAPGEF4-204ENST00000409036 CABP2Q9NPB3 220 aa8.15□□□□□ -1.1
RAPGEF4-204ENST00000409036 PPIP5K1Q6PFW1 1433 aa8.15□□□□□ -1.11
RAPGEF4-204ENST00000409036 HSP90AA1P07900 732 aaKnown RBP8.15□□□□□ -1.11
RAPGEF4-204ENST00000409036 MLECQ14165 292 aa8.15□□□□□ -1.11
RAPGEF4-204ENST00000409036 PHF23Q9BUL5 403 aaPredicted RBP8.15□□□□□ -1.11
RAPGEF4-204ENST00000409036 METP08581 1390 aa8.15□□□□□ -1.11
RAPGEF4-204ENST00000409036 IL16Q14005 1332 aa8.15□□□□□ -1.11
RAPGEF4-204ENST00000409036 SLKQ9H2G2 1235 aaPredicted RBP8.14□□□□□ -1.11
RAPGEF4-204ENST00000409036 PLEKHH1Q9ULM0 1364 aa8.14□□□□□ -1.11
RAPGEF4-204ENST00000409036 STK26Q9P289 416 aa8.14□□□□□ -1.11
RAPGEF4-204ENST00000409036 MINK1Q8N4C8 1332 aaPredicted RBP8.14□□□□□ -1.11
RAPGEF4-204ENST00000409036 DUSP27Q5VZP5 1158 aa8.13□□□□□ -1.11
RAPGEF4-204ENST00000409036 NALCNQ8IZF0 1738 aa8.13□□□□□ -1.11
RAPGEF4-204ENST00000409036 IL27Q8NEV9 243 aa8.13□□□□□ -1.11
RAPGEF4-204ENST00000409036 NUTM2DQ5VT03 806 aaPredicted RBP8.13□□□□□ -1.11
RAPGEF4-204ENST00000409036 CCDC61Q9Y6R9 512 aa8.13□□□□□ -1.11
RAPGEF4-204ENST00000409036 PLEKHG3A1L390 1219 aa8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 MYH16Q9H6N6 1097 aa8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 TTC21AQ8NDW8 1320 aa8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 KIF24Q5T7B8 1368 aa8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 FYB1O15117 783 aa8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 MS4A1P11836 297 aa8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 MTHFSP49914 203 aa8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 CALD1Q05682 793 aaKnown RBP8.12□□□□□ -1.11
RAPGEF4-204ENST00000409036 SIPA1L2Q9P2F8 1722 aaPredicted RBP8.11□□□□□ -1.11
RAPGEF4-204ENST00000409036 BECN1Q14457 450 aa8.11□□□□□ -1.11
RAPGEF4-204ENST00000409036 PLPPR3Q6T4P5 718 aa8.11□□□□□ -1.11
RAPGEF4-204ENST00000409036 TXNDC2Q86VQ3 553 aa8.11□□□□□ -1.11
RAPGEF4-204ENST00000409036 FCHSD2O94868 740 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 CLUAP1Q96AJ1 413 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 FMN2Q9NZ56 1722 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 ZNF428Q96B54 188 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 NUDT16Q96DE0 195 aaKnown RBP8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 ANO8Q9HCE9 1232 aaPredicted RBP8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 CABP1Q9NZU7 370 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 ROBO2Q9HCK4 1378 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 APAF1O14727 1248 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 DIAPH1O60610 1272 aaKnown RBP8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 PDE3AQ14432 1141 aa8.1□□□□□ -1.11
RAPGEF4-204ENST00000409036 NWD1Q149M9 1564 aa8.09□□□□□ -1.11
RAPGEF4-204ENST00000409036 USP31Q70CQ4 1352 aa8.09□□□□□ -1.11
RAPGEF4-204ENST00000409036 WWC1Q8IX03 1113 aa8.09□□□□□ -1.11
RAPGEF4-204ENST00000409036 GZF1Q9H116 711 aaPredicted RBP8.09□□□□□ -1.11
RAPGEF4-204ENST00000409036 MAPK8IP3Q9UPT6 1336 aa8.09□□□□□ -1.11
RAPGEF4-204ENST00000409036 LMOD3Q0VAK6 560 aa8.09□□□□□ -1.11
RAPGEF4-204ENST00000409036 OVOS2A0A0J9YW53 1432 aa8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 USP6P35125 1406 aa8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 OVOS2Q6IE36 1432 aa8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 SAFB2Q14151 953 aaKnown RBP eCLIP8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 COG3Q96JB2 828 aa8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 BCL2L13Q9BXK5 485 aa8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 RRP7AQ9Y3A4 280 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 PTPRUQ92729 1446 aa8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 SSH2Q76I76 1423 aa8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 CHD2O14647 1828 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 FTSJ3Q8IY81 847 aaKnown RBP8.08□□□□□ -1.12
RAPGEF4-204ENST00000409036 SETD1BQ9UPS6 1966 aaKnown RBP8.07□□□□□ -1.12
RAPGEF4-204ENST00000409036 TCP11L2Q8N4U5 519 aa8.07□□□□□ -1.12
RAPGEF4-204ENST00000409036 TTC21BQ7Z4L5 1316 aa8.07□□□□□ -1.12
RAPGEF4-204ENST00000409036 LTKP29376 864 aa8.07□□□□□ -1.12
RAPGEF4-204ENST00000409036 WAPLQ7Z5K2 1190 aa8.07□□□□□ -1.12
RAPGEF4-204ENST00000409036 PLEKHF1Q96S99 279 aa8.07□□□□□ -1.12
RAPGEF4-204ENST00000409036 U2SURPO15042 1029 aaKnown RBP8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 U2AF1L5P0DN76 240 aaPredicted RBP8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 U2AF1Q01081 240 aaKnown RBP eCLIP8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 GSE1Q14687 1217 aa8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 GGNBP2Q9H3C7 697 aa8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 BRPF3Q9ULD4 1205 aa8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 HAP1P54257 671 aaPredicted RBP8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 NCOA3Q9Y6Q9 1424 aa8.06□□□□□ -1.12
RAPGEF4-204ENST00000409036 CENPQQ7L2Z9 268 aaPredicted RBP8.05□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms