RNA–Protein interactions for RNA: ENST00000409020.5

NIF3L1-202, Transcript of NGG1 interacting factor 3 like 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene NIF3L1, Length 1,680 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NIF3L1-202ENST00000409020 EIF3AQ14152 1382 aaKnown RBP13.88□□□□□ -0.19
NIF3L1-202ENST00000409020 UPF1Q92900 1129 aaKnown RBP eCLIP13.88□□□□□ -0.19
NIF3L1-202ENST00000409020 TRPC5Q9UL62 973 aaPredicted RBP13.88□□□□□ -0.19
NIF3L1-202ENST00000409020 ALS2Q96Q42 1657 aa13.87□□□□□ -0.19
NIF3L1-202ENST00000409020 NGDNQ8NEJ9 315 aaKnown RBP13.87□□□□□ -0.19
NIF3L1-202ENST00000409020 TRPM1Q7Z4N2 1603 aa13.87□□□□□ -0.19
NIF3L1-202ENST00000409020 SLIT2O94813 1529 aa13.87□□□□□ -0.19
NIF3L1-202ENST00000409020 ARHGEF10O15013 1369 aa13.86□□□□□ -0.19
NIF3L1-202ENST00000409020 NBPF8Q3BBV2 869 aa13.86□□□□□ -0.19
NIF3L1-202ENST00000409020 TOPAZ1Q8N9V7 1692 aa13.86□□□□□ -0.19
NIF3L1-202ENST00000409020 CENPJQ9HC77 1338 aaPredicted RBP13.86□□□□□ -0.19
NIF3L1-202ENST00000409020 CABP2Q9NPB3 220 aa13.85□□□□□ -0.19
NIF3L1-202ENST00000409020 GPRASP1Q5JY77 1395 aa13.85□□□□□ -0.19
NIF3L1-202ENST00000409020 PAK3O75914 559 aaPredicted RBP13.85□□□□□ -0.19
NIF3L1-202ENST00000409020 HAP1P54257 671 aaPredicted RBP13.85□□□□□ -0.19
NIF3L1-202ENST00000409020 QRICH2Q9H0J4 1663 aa13.84□□□□□ -0.19
NIF3L1-202ENST00000409020 TRIM26Q12899 539 aaPredicted RBP13.84□□□□□ -0.19
NIF3L1-202ENST00000409020 UNC5CLQ8IV45 518 aa13.84□□□□□ -0.19
NIF3L1-202ENST00000409020 ITSN1Q15811 1721 aa13.83□□□□□ -0.19
NIF3L1-202ENST00000409020 GLI3P10071 1580 aa13.83□□□□□ -0.19
NIF3L1-202ENST00000409020 FAM83GA6ND36 823 aa13.83□□□□□ -0.2
NIF3L1-202ENST00000409020 RALGAPBQ86X10 1494 aa13.83□□□□□ -0.2
NIF3L1-202ENST00000409020 PLCH1Q4KWH8 1693 aa13.83□□□□□ -0.2
NIF3L1-202ENST00000409020 ACEP12821 1306 aa13.83□□□□□ -0.2
NIF3L1-202ENST00000409020 ROCK2O75116 1388 aaKnown RBP13.83□□□□□ -0.2
NIF3L1-202ENST00000409020 CRYBG1Q9Y4K1 1723 aa13.82□□□□□ -0.2
NIF3L1-202ENST00000409020 SRPK2P78362 688 aaKnown RBP13.82□□□□□ -0.2
NIF3L1-202ENST00000409020 NUTM2GQ5VZR2 741 aa13.82□□□□□ -0.2
NIF3L1-202ENST00000409020 GJD4Q96KN9 370 aaPredicted RBP13.82□□□□□ -0.2
NIF3L1-202ENST00000409020 CCDC61Q9Y6R9 512 aa13.82□□□□□ -0.2
NIF3L1-202ENST00000409020 POLR3AO14802 1390 aaPredicted RBP13.82□□□□□ -0.2
NIF3L1-202ENST00000409020 TNKS1BP1Q9C0C2 1729 aaKnown RBP13.82□□□□□ -0.2
NIF3L1-202ENST00000409020 PPIP5K1Q6PFW1 1433 aa13.81□□□□□ -0.2
NIF3L1-202ENST00000409020 PLEKHG3A1L390 1219 aa13.8□□□□□ -0.2
NIF3L1-202ENST00000409020 BTG4Q9NY30 223 aa13.79□□□□□ -0.2
NIF3L1-202ENST00000409020 NRAPQ86VF7 1730 aa13.78□□□□□ -0.2
NIF3L1-202ENST00000409020 SLC4A2P04920 1241 aa13.78□□□□□ -0.2
NIF3L1-202ENST00000409020 VPS72Q15906 364 aa13.78□□□□□ -0.2
NIF3L1-202ENST00000409020 CABP1Q9NZU7 370 aa13.78□□□□□ -0.2
NIF3L1-202ENST00000409020 NWD2Q9ULI1 1742 aa13.77□□□□□ -0.2
NIF3L1-202ENST00000409020 PHRF1Q9P1Y6 1649 aaKnown RBP13.77□□□□□ -0.2
NIF3L1-202ENST00000409020 TONSLQ96HA7 1378 aa13.77□□□□□ -0.2
NIF3L1-202ENST00000409020 KIAA0232Q92628 1395 aa13.76□□□□□ -0.21
NIF3L1-202ENST00000409020 CHRNA2Q15822 529 aa13.76□□□□□ -0.21
NIF3L1-202ENST00000409020 ATAD2Q6PL18 1390 aa13.76□□□□□ -0.21
NIF3L1-202ENST00000409020 CCDC9Q9Y3X0 531 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-202ENST00000409020 COL14A1Q05707 1796 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-202ENST00000409020 ZC3H6P61129 1189 aaKnown RBP13.75□□□□□ -0.21
NIF3L1-202ENST00000409020 NRKQ7Z2Y5 1582 aa13.74□□□□□ -0.21
NIF3L1-202ENST00000409020 EVC2Q86UK5 1308 aa13.74□□□□□ -0.21
NIF3L1-202ENST00000409020 SEPT12Q8IYM1 358 aa13.74□□□□□ -0.21
NIF3L1-202ENST00000409020 ABTB2Q8N961 1025 aa13.74□□□□□ -0.21
NIF3L1-202ENST00000409020 CARD11Q9BXL7 1154 aa13.74□□□□□ -0.21
NIF3L1-202ENST00000409020 PRDM11Q9NQV5 511 aa13.74□□□□□ -0.21
NIF3L1-202ENST00000409020 USP6P35125 1406 aa13.73□□□□□ -0.21
NIF3L1-202ENST00000409020 BRWD3Q6RI45 1802 aa13.73□□□□□ -0.21
NIF3L1-202ENST00000409020 FAM98CQ17RN3 349 aaKnown RBP13.72□□□□□ -0.21
NIF3L1-202ENST00000409020 USP19O94966 1318 aa13.72□□□□□ -0.21
NIF3L1-202ENST00000409020 SSH2Q76I76 1423 aa13.72□□□□□ -0.21
NIF3L1-202ENST00000409020 ONECUT3O60422 494 aaPredicted RBP13.71□□□□□ -0.21
NIF3L1-202ENST00000409020 PIK3C2AO00443 1686 aa13.7□□□□□ -0.22
NIF3L1-202ENST00000409020 SPATA31A5Q5VU36 1347 aa13.7□□□□□ -0.22
NIF3L1-202ENST00000409020 SPATA31A7Q8IWB4 1347 aa13.7□□□□□ -0.22
NIF3L1-202ENST00000409020 STRN4Q9NRL3 753 aa13.69□□□□□ -0.22
NIF3L1-202ENST00000409020 CAMTA1Q9Y6Y1 1673 aa13.69□□□□□ -0.22
NIF3L1-202ENST00000409020 SBNO2Q9Y2G9 1366 aa13.68□□□□□ -0.22
NIF3L1-202ENST00000409020 A0A0G2JS52 829 aa13.68□□□□□ -0.22
NIF3L1-202ENST00000409020 GCP02774 474 aa13.68□□□□□ -0.22
NIF3L1-202ENST00000409020 FAM182BQ5T319 152 aa13.68□□□□□ -0.22
NIF3L1-202ENST00000409020 LMO7Q8WWI1 1683 aa13.67□□□□□ -0.22
NIF3L1-202ENST00000409020 CPDO75976 1380 aa13.67□□□□□ -0.22
NIF3L1-202ENST00000409020 NLRP6P59044 892 aa13.67□□□□□ -0.22
NIF3L1-202ENST00000409020 CPSF1Q10570 1443 aaKnown RBP13.67□□□□□ -0.22
NIF3L1-202ENST00000409020 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
NIF3L1-202ENST00000409020 EIF5BO60841 1220 aaKnown RBP13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 KRT27Q7Z3Y8 459 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 NLRP13Q86W25 1043 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 SPATA31A1Q5TZJ5 1347 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 TTC21BQ7Z4L5 1316 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 AKAP12Q02952 1782 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 SLIT3O75094 1523 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 THSD7AQ9UPZ6 1657 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 ZBTB7CA1YPR0 619 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 LARP1Q6PKG0 1096 aaKnown RBP13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 USP35Q9P2H5 1018 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 ZRANB1Q9UGI0 708 aa13.66□□□□□ -0.22
NIF3L1-202ENST00000409020 ST20-MTHFSA0A0A6YYL1 179 aa13.65□□□□□ -0.22
NIF3L1-202ENST00000409020 TESK2Q96S53 571 aa13.65□□□□□ -0.22
NIF3L1-202ENST00000409020 PCGF6Q9BYE7 350 aa13.65□□□□□ -0.22
NIF3L1-202ENST00000409020 BRD4O60885 1362 aaPredicted RBP13.64□□□□□ -0.23
NIF3L1-202ENST00000409020 KTN1Q86UP2 1357 aaKnown RBP13.64□□□□□ -0.23
NIF3L1-202ENST00000409020 SOX12O15370 315 aa13.64□□□□□ -0.23
NIF3L1-202ENST00000409020 DEFB132Q7Z7B7 95 aa13.64□□□□□ -0.23
NIF3L1-202ENST00000409020 COL5A2P05997 1499 aaPredicted RBP13.63□□□□□ -0.23
NIF3L1-202ENST00000409020 TMC1Q8TDI8 760 aa13.63□□□□□ -0.23
NIF3L1-202ENST00000409020 SLC12A5Q9H2X9 1139 aa13.63□□□□□ -0.23
NIF3L1-202ENST00000409020 BLMP54132 1417 aaPredicted RBP13.63□□□□□ -0.23
NIF3L1-202ENST00000409020 SUGP2Q8IX01 1082 aaKnown RBP eCLIP13.63□□□□□ -0.23
NIF3L1-202ENST00000409020 MON2Q7Z3U7 1717 aa13.62□□□□□ -0.23
NIF3L1-202ENST00000409020 EVA1CP58658 441 aa13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11 ms