RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 A0A0G2JS52 829 aa18.31■□□□□ 0.52
SNORD88B-201ENST00000408454 MYT1Q01538 1121 aa18.31■□□□□ 0.52
SNORD88B-201ENST00000408454 L3MBTL2Q969R5 705 aa18.31■□□□□ 0.52
SNORD88B-201ENST00000408454 TRPM3Q9HCF6 1732 aaPredicted RBP18.3■□□□□ 0.52
SNORD88B-201ENST00000408454 NLRP13Q86W25 1043 aa18.3■□□□□ 0.52
SNORD88B-201ENST00000408454 ALS2Q96Q42 1657 aa18.3■□□□□ 0.52
SNORD88B-201ENST00000408454 TONSLQ96HA7 1378 aa18.3■□□□□ 0.52
SNORD88B-201ENST00000408454 ACEP12821 1306 aa18.29■□□□□ 0.52
SNORD88B-201ENST00000408454 CABLES1Q8TDN4 633 aa18.29■□□□□ 0.52
SNORD88B-201ENST00000408454 ABCA3Q99758 1704 aa18.29■□□□□ 0.52
SNORD88B-201ENST00000408454 PLCH1Q4KWH8 1693 aa18.28■□□□□ 0.52
SNORD88B-201ENST00000408454 NEUROD1Q13562 356 aa18.28■□□□□ 0.52
SNORD88B-201ENST00000408454 NBPF8Q3BBV2 869 aa18.28■□□□□ 0.52
SNORD88B-201ENST00000408454 ZNF692Q9BU19 519 aaPredicted RBP18.28■□□□□ 0.52
SNORD88B-201ENST00000408454 PPIP5K1Q6PFW1 1433 aa18.27■□□□□ 0.52
SNORD88B-201ENST00000408454 ABTB2Q8N961 1025 aa18.27■□□□□ 0.52
SNORD88B-201ENST00000408454 BTG4Q9NY30 223 aa18.27■□□□□ 0.52
SNORD88B-201ENST00000408454 BLMP54132 1417 aaPredicted RBP18.26■□□□□ 0.51
SNORD88B-201ENST00000408454 TOPAZ1Q8N9V7 1692 aa18.26■□□□□ 0.51
SNORD88B-201ENST00000408454 C11orf95C9JLR9 678 aaPredicted RBP18.26■□□□□ 0.51
SNORD88B-201ENST00000408454 PLEKHG5O94827 1062 aa18.26■□□□□ 0.51
SNORD88B-201ENST00000408454 TRIM26Q12899 539 aaPredicted RBP18.26■□□□□ 0.51
SNORD88B-201ENST00000408454 NBPF1Q3BBV0 1214 aa18.26■□□□□ 0.51
SNORD88B-201ENST00000408454 ZRANB1Q9UGI0 708 aa18.26■□□□□ 0.51
SNORD88B-201ENST00000408454 ONECUT3O60422 494 aaPredicted RBP18.25■□□□□ 0.51
SNORD88B-201ENST00000408454 SEPT12Q8IYM1 358 aa18.25■□□□□ 0.51
SNORD88B-201ENST00000408454 QRICH2Q9H0J4 1663 aa18.25■□□□□ 0.51
SNORD88B-201ENST00000408454 FAM83GA6ND36 823 aa18.24■□□□□ 0.51
SNORD88B-201ENST00000408454 EVA1CP58658 441 aa18.24■□□□□ 0.51
SNORD88B-201ENST00000408454 KRT27Q7Z3Y8 459 aa18.24■□□□□ 0.51
SNORD88B-201ENST00000408454 TRPM1Q7Z4N2 1603 aa18.23■□□□□ 0.51
SNORD88B-201ENST00000408454 SBNO2Q9Y2G9 1366 aa18.23■□□□□ 0.51
SNORD88B-201ENST00000408454 GLI3P10071 1580 aa18.22■□□□□ 0.51
SNORD88B-201ENST00000408454 CPDO75976 1380 aa18.21■□□□□ 0.51
SNORD88B-201ENST00000408454 KIAA0232Q92628 1395 aa18.2■□□□□ 0.5
SNORD88B-201ENST00000408454 BAG6P46379 1132 aa18.2■□□□□ 0.5
SNORD88B-201ENST00000408454 KCNH5Q8NCM2 988 aa18.2■□□□□ 0.5
SNORD88B-201ENST00000408454 CARD11Q9BXL7 1154 aa18.2■□□□□ 0.5
SNORD88B-201ENST00000408454 TTC21AQ8NDW8 1320 aa18.2■□□□□ 0.5
SNORD88B-201ENST00000408454 SIN3AQ96ST3 1273 aa18.19■□□□□ 0.5
SNORD88B-201ENST00000408454 CABP2Q9NPB3 220 aa18.19■□□□□ 0.5
SNORD88B-201ENST00000408454 THRAP3Q9Y2W1 955 aaKnown RBP18.19■□□□□ 0.5
SNORD88B-201ENST00000408454 SPATA31A5Q5VU36 1347 aa18.19■□□□□ 0.5
SNORD88B-201ENST00000408454 SPATA31A7Q8IWB4 1347 aa18.19■□□□□ 0.5
SNORD88B-201ENST00000408454 USP6P35125 1406 aa18.18■□□□□ 0.5
SNORD88B-201ENST00000408454 USP19O94966 1318 aa18.18■□□□□ 0.5
SNORD88B-201ENST00000408454 PHRF1Q9P1Y6 1649 aaKnown RBP18.17■□□□□ 0.5
SNORD88B-201ENST00000408454 FAM98CQ17RN3 349 aaKnown RBP18.17■□□□□ 0.5
SNORD88B-201ENST00000408454 CABP1Q9NZU7 370 aa18.17■□□□□ 0.5
SNORD88B-201ENST00000408454 NRAPQ86VF7 1730 aa18.17■□□□□ 0.5
SNORD88B-201ENST00000408454 NLRP6P59044 892 aa18.16■□□□□ 0.5
SNORD88B-201ENST00000408454 PUS7Q96PZ0 661 aaKnown RBP18.16■□□□□ 0.5
SNORD88B-201ENST00000408454 CRYBG1Q9Y4K1 1723 aa18.15■□□□□ 0.5
SNORD88B-201ENST00000408454 GCP02774 474 aa18.15■□□□□ 0.5
SNORD88B-201ENST00000408454 ZC3H6P61129 1189 aaKnown RBP18.15■□□□□ 0.5
SNORD88B-201ENST00000408454 HDGFL2Q7Z4V5 671 aaPredicted RBP18.15■□□□□ 0.5
SNORD88B-201ENST00000408454 NINLQ9Y2I6 1382 aa18.15■□□□□ 0.5
SNORD88B-201ENST00000408454 PDE3BQ13370 1112 aa18.14■□□□□ 0.49
SNORD88B-201ENST00000408454 BARGINQ6ZT62 677 aa18.14■□□□□ 0.49
SNORD88B-201ENST00000408454 STRN4Q9NRL3 753 aa18.14■□□□□ 0.49
SNORD88B-201ENST00000408454 FAM196AQ6ZSG2 479 aa18.13■□□□□ 0.49
SNORD88B-201ENST00000408454 TERF2IPQ9NYB0 399 aa18.13■□□□□ 0.49
SNORD88B-201ENST00000408454 SPATA31A1Q5TZJ5 1347 aa18.13■□□□□ 0.49
SNORD88B-201ENST00000408454 NUTM2GQ5VZR2 741 aa18.12■□□□□ 0.49
SNORD88B-201ENST00000408454 CDCA7Q9BWT1 371 aaPredicted RBP18.12■□□□□ 0.49
SNORD88B-201ENST00000408454 TIMELESSQ9UNS1 1208 aa18.12■□□□□ 0.49
SNORD88B-201ENST00000408454 SSH2Q76I76 1423 aa18.12■□□□□ 0.49
SNORD88B-201ENST00000408454 NRKQ7Z2Y5 1582 aa18.12■□□□□ 0.49
SNORD88B-201ENST00000408454 TCP11L2Q8N4U5 519 aa18.11■□□□□ 0.49
SNORD88B-201ENST00000408454 CLSPNQ9HAW4 1339 aa18.11■□□□□ 0.49
SNORD88B-201ENST00000408454 AATKQ6ZMQ8 1374 aa18.11■□□□□ 0.49
SNORD88B-201ENST00000408454 KTN1Q86UP2 1357 aaKnown RBP18.11■□□□□ 0.49
SNORD88B-201ENST00000408454 PARD3Q8TEW0 1356 aa18.1■□□□□ 0.49
SNORD88B-201ENST00000408454 CHRNA2Q15822 529 aa18.1■□□□□ 0.49
SNORD88B-201ENST00000408454 CDCA8Q53HL2 280 aa18.09■□□□□ 0.49
SNORD88B-201ENST00000408454 ABCC6O95255 1503 aa18.08■□□□□ 0.48
SNORD88B-201ENST00000408454 CRB1P82279 1406 aa18.07■□□□□ 0.48
SNORD88B-201ENST00000408454 RGPD1P0DJD0 1748 aa18.07■□□□□ 0.48
SNORD88B-201ENST00000408454 TTC21BQ7Z4L5 1316 aa18.07■□□□□ 0.48
SNORD88B-201ENST00000408454 SLIT3O75094 1523 aa18.07■□□□□ 0.48
SNORD88B-201ENST00000408454 THSD7AQ9UPZ6 1657 aa18.06■□□□□ 0.48
SNORD88B-201ENST00000408454 BRWD3Q6RI45 1802 aa18.05■□□□□ 0.48
SNORD88B-201ENST00000408454 TMC1Q8TDI8 760 aa18.05■□□□□ 0.48
SNORD88B-201ENST00000408454 USP35Q9P2H5 1018 aa18.05■□□□□ 0.48
SNORD88B-201ENST00000408454 CPSF1Q10570 1443 aaKnown RBP18.05■□□□□ 0.48
SNORD88B-201ENST00000408454 COL5A2P05997 1499 aaPredicted RBP18.04■□□□□ 0.48
SNORD88B-201ENST00000408454 ZBTB7CA1YPR0 619 aa18.04■□□□□ 0.48
SNORD88B-201ENST00000408454 TOM1L2Q6ZVM7 507 aa18.04■□□□□ 0.48
SNORD88B-201ENST00000408454 DISP2A7MBM2 1401 aa18.04■□□□□ 0.48
SNORD88B-201ENST00000408454 LMO7Q8WWI1 1683 aa18.03■□□□□ 0.48
SNORD88B-201ENST00000408454 CSB-PGBD3P0DP91 1061 aa18.03■□□□□ 0.48
SNORD88B-201ENST00000408454 EDC4Q6P2E9 1401 aaKnown RBP18.03■□□□□ 0.48
SNORD88B-201ENST00000408454 CAMTA1Q9Y6Y1 1673 aa18.02■□□□□ 0.47
SNORD88B-201ENST00000408454 AKAP12Q02952 1782 aa18.02■□□□□ 0.47
SNORD88B-201ENST00000408454 WDR17Q8IZU2 1322 aa18.01■□□□□ 0.47
SNORD88B-201ENST00000408454 TMF1P82094 1093 aa18.01■□□□□ 0.47
SNORD88B-201ENST00000408454 LARP1Q6PKG0 1096 aaKnown RBP18.01■□□□□ 0.47
SNORD88B-201ENST00000408454 CCDC7Q96M83 1385 aa18.01■□□□□ 0.47
SNORD88B-201ENST00000408454 USP31Q70CQ4 1352 aa18■□□□□ 0.47
SNORD88B-201ENST00000408454 PIK3C2AO00443 1686 aa17.99■□□□□ 0.47
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms