RNA–Protein interactions for RNA: ENST00000407218.5

MECP2-203, Transcript of methyl-CpG binding protein 2, humanhuman

TSL 5 BASIC

Gene MECP2, Length 1,174 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MECP2-203ENST00000407218 PLEKHG3A1L390 1219 aa23.28■■□□□ 1.32
MECP2-203ENST00000407218 SBNO1A3KN83 1393 aa23.27■■□□□ 1.32
MECP2-203ENST00000407218 SLC24A1O60721 1099 aa23.27■■□□□ 1.32
MECP2-203ENST00000407218 FNBP4Q8N3X1 1017 aaPredicted RBP23.27■■□□□ 1.32
MECP2-203ENST00000407218 TNS3Q68CZ2 1445 aa23.26■■□□□ 1.31
MECP2-203ENST00000407218 SLC12A5Q9H2X9 1139 aa23.26■■□□□ 1.31
MECP2-203ENST00000407218 RBM6P78332 1123 aaKnown RBP23.24■■□□□ 1.31
MECP2-203ENST00000407218 POLR3AO14802 1390 aaPredicted RBP23.24■■□□□ 1.31
MECP2-203ENST00000407218 ARHGEF10O15013 1369 aa23.24■■□□□ 1.31
MECP2-203ENST00000407218 ZEB1P37275 1124 aaPredicted RBP23.23■■□□□ 1.31
MECP2-203ENST00000407218 CDCA8Q53HL2 280 aa23.23■■□□□ 1.31
MECP2-203ENST00000407218 QTRT2Q9H974 415 aaKnown RBP23.23■■□□□ 1.31
MECP2-203ENST00000407218 MARF1Q9Y4F3 1742 aaKnown RBP23.22■■□□□ 1.31
MECP2-203ENST00000407218 USP21Q9UK80 565 aa23.21■■□□□ 1.31
MECP2-203ENST00000407218 NUTM2GQ5VZR2 741 aa23.2■■□□□ 1.3
MECP2-203ENST00000407218 TRPC5Q9UL62 973 aaPredicted RBP23.2■■□□□ 1.3
MECP2-203ENST00000407218 ATRNO75882 1429 aa23.19■■□□□ 1.3
MECP2-203ENST00000407218 C11orf95C9JLR9 678 aaPredicted RBP23.19■■□□□ 1.3
MECP2-203ENST00000407218 PUS7Q96PZ0 661 aaKnown RBP23.19■■□□□ 1.3
MECP2-203ENST00000407218 HDGFL2Q7Z4V5 671 aaPredicted RBP23.18■■□□□ 1.3
MECP2-203ENST00000407218 TRPM3Q9HCF6 1732 aaPredicted RBP23.18■■□□□ 1.3
MECP2-203ENST00000407218 RGS12O14924 1447 aa23.17■■□□□ 1.3
MECP2-203ENST00000407218 USP6P35125 1406 aa23.17■■□□□ 1.3
MECP2-203ENST00000407218 KTN1Q86UP2 1357 aaKnown RBP23.17■■□□□ 1.3
MECP2-203ENST00000407218 CABLES1Q8TDN4 633 aa23.17■■□□□ 1.3
MECP2-203ENST00000407218 BCL9LQ86UU0 1499 aa23.17■■□□□ 1.3
MECP2-203ENST00000407218 TNKS1BP1Q9C0C2 1729 aaKnown RBP23.16■■□□□ 1.3
MECP2-203ENST00000407218 HAP1P54257 671 aaPredicted RBP23.15■■□□□ 1.3
MECP2-203ENST00000407218 SUGP2Q8IX01 1082 aaKnown RBP eCLIP23.15■■□□□ 1.35e-7■■■■□ 20.4
MECP2-203ENST00000407218 TERF2IPQ9NYB0 399 aa23.15■■□□□ 1.3
MECP2-203ENST00000407218 A0A1W2PP64 1363 aa23.14■■□□□ 1.3
MECP2-203ENST00000407218 SLIT2O94813 1529 aa23.14■■□□□ 1.3
MECP2-203ENST00000407218 CD163L1Q9NR16 1453 aa23.14■■□□□ 1.29
MECP2-203ENST00000407218 ZNF692Q9BU19 519 aaPredicted RBP23.14■■□□□ 1.29
MECP2-203ENST00000407218 CPSF1Q10570 1443 aaKnown RBP23.14■■□□□ 1.29
MECP2-203ENST00000407218 NINLQ9Y2I6 1382 aa23.14■■□□□ 1.29
MECP2-203ENST00000407218 ABTB2Q8N961 1025 aa23.13■■□□□ 1.29
MECP2-203ENST00000407218 AKAP12Q02952 1782 aa23.13■■□□□ 1.29
MECP2-203ENST00000407218 ABCA3Q99758 1704 aa23.13■■□□□ 1.29
MECP2-203ENST00000407218 ALS2Q96Q42 1657 aa23.12■■□□□ 1.29
MECP2-203ENST00000407218 TTC21BQ7Z4L5 1316 aa23.11■■□□□ 1.29
MECP2-203ENST00000407218 KIF7Q2M1P5 1343 aa23.1■■□□□ 1.29
MECP2-203ENST00000407218 UPF1Q92900 1129 aaKnown RBP eCLIP23.1■■□□□ 1.295e-7■■□□□ 11.4
MECP2-203ENST00000407218 MYOM1P52179 1685 aa23.09■■□□□ 1.29
MECP2-203ENST00000407218 UNC5CLQ8IV45 518 aa23.09■■□□□ 1.29
MECP2-203ENST00000407218 ANKRD36BQ8N2N9 1353 aa23.09■■□□□ 1.29
MECP2-203ENST00000407218 MON2Q7Z3U7 1717 aa23.08■■□□□ 1.29
MECP2-203ENST00000407218 SSH2Q76I76 1423 aa23.08■■□□□ 1.28
MECP2-203ENST00000407218 NLRP6P59044 892 aa23.07■■□□□ 1.28
MECP2-203ENST00000407218 NME9Q86XW9 330 aa23.07■■□□□ 1.28
MECP2-203ENST00000407218 ZRANB1Q9UGI0 708 aa23.07■■□□□ 1.28
MECP2-203ENST00000407218 NWD2Q9ULI1 1742 aa23.07■■□□□ 1.28
MECP2-203ENST00000407218 NRKQ7Z2Y5 1582 aa23.06■■□□□ 1.28
MECP2-203ENST00000407218 BRD4O60885 1362 aaPredicted RBP23.05■■□□□ 1.28
MECP2-203ENST00000407218 SOX12O15370 315 aa23.05■■□□□ 1.28
MECP2-203ENST00000407218 GJD4Q96KN9 370 aaPredicted RBP23.05■■□□□ 1.28
MECP2-203ENST00000407218 EDC4Q6P2E9 1401 aaKnown RBP23.05■■□□□ 1.28
MECP2-203ENST00000407218 CCDC7Q96M83 1385 aa23.04■■□□□ 1.28
MECP2-203ENST00000407218 WASHC2AQ641Q2 1341 aa23.04■■□□□ 1.28
MECP2-203ENST00000407218 TTC21AQ8NDW8 1320 aa23.04■■□□□ 1.28
MECP2-203ENST00000407218 PIK3C2AO00443 1686 aa23.03■■□□□ 1.28
MECP2-203ENST00000407218 NLRP13Q86W25 1043 aa23.03■■□□□ 1.28
MECP2-203ENST00000407218 PLCH1Q4KWH8 1693 aa23.03■■□□□ 1.28
MECP2-203ENST00000407218 NSD3Q9BZ95 1437 aa23.02■■□□□ 1.28
MECP2-203ENST00000407218 ZBTB7CA1YPR0 619 aa23.02■■□□□ 1.28
MECP2-203ENST00000407218 CARD14Q9BXL6 1004 aa23.02■■□□□ 1.28
MECP2-203ENST00000407218 PANK3Q9H999 370 aa23.02■■□□□ 1.28
MECP2-203ENST00000407218 CRYBG1Q9Y4K1 1723 aa23.02■■□□□ 1.28
MECP2-203ENST00000407218 ZC3H6P61129 1189 aaKnown RBP23■■□□□ 1.27
MECP2-203ENST00000407218 VPS72Q15906 364 aa23■■□□□ 1.27
MECP2-203ENST00000407218 GLI3P10071 1580 aa23■■□□□ 1.27
MECP2-203ENST00000407218 COL14A1Q05707 1796 aaKnown RBP22.99■■□□□ 1.27
MECP2-203ENST00000407218 USP19O94966 1318 aa22.98■■□□□ 1.27
MECP2-203ENST00000407218 PHRF1Q9P1Y6 1649 aaKnown RBP22.97■■□□□ 1.27
MECP2-203ENST00000407218 FAM83GA6ND36 823 aa22.97■■□□□ 1.27
MECP2-203ENST00000407218 GGNBP2Q9H3C7 697 aa22.97■■□□□ 1.27
MECP2-203ENST00000407218 GCP02774 474 aa22.96■■□□□ 1.27
MECP2-203ENST00000407218 CHRNA2Q15822 529 aa22.95■■□□□ 1.26
MECP2-203ENST00000407218 NRAPQ86VF7 1730 aa22.95■■□□□ 1.26
MECP2-203ENST00000407218 KIAA0232Q92628 1395 aa22.95■■□□□ 1.26
MECP2-203ENST00000407218 PRDM11Q9NQV5 511 aa22.95■■□□□ 1.26
MECP2-203ENST00000407218 COG3Q96JB2 828 aa22.93■■□□□ 1.26
MECP2-203ENST00000407218 FYB1O15117 783 aa22.92■■□□□ 1.26
MECP2-203ENST00000407218 ONECUT3O60422 494 aaPredicted RBP22.92■■□□□ 1.26
MECP2-203ENST00000407218 CNGB1Q14028 1251 aaPredicted RBP22.92■■□□□ 1.26
MECP2-203ENST00000407218 USP31Q70CQ4 1352 aa22.91■■□□□ 1.26
MECP2-203ENST00000407218 BTG4Q9NY30 223 aa22.91■■□□□ 1.26
MECP2-203ENST00000407218 CGNL1Q0VF96 1302 aa22.9■■□□□ 1.26
MECP2-203ENST00000407218 CCDC125Q86Z20 511 aa22.9■■□□□ 1.26
MECP2-203ENST00000407218 SLIT3O75094 1523 aa22.9■■□□□ 1.26
MECP2-203ENST00000407218 OVOS2A0A0J9YW53 1432 aa22.9■■□□□ 1.26
MECP2-203ENST00000407218 OVOS2Q6IE36 1432 aa22.9■■□□□ 1.26
MECP2-203ENST00000407218 KIF20BQ96Q89 1820 aa22.89■■□□□ 1.26
MECP2-203ENST00000407218 KNSTRNQ9Y448 316 aa22.89■■□□□ 1.25
MECP2-203ENST00000407218 FBLN1P23142 703 aa22.88■■□□□ 1.25
MECP2-203ENST00000407218 KCNH5Q8NCM2 988 aa22.88■■□□□ 1.25
MECP2-203ENST00000407218 CCDC9Q9Y3X0 531 aaKnown RBP22.88■■□□□ 1.25
MECP2-203ENST00000407218 CPDO75976 1380 aa22.87■■□□□ 1.25
MECP2-203ENST00000407218 SEPT12Q8IYM1 358 aa22.86■■□□□ 1.25
MECP2-203ENST00000407218 TNNT2P45379 298 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms