RNA–Protein interactions for RNA: ENST00000406949.5

PCNX4-204, Transcript of pecanex 4, humanhuman

TSL 2 BASIC

Gene PCNX4, Length 3,513 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCNX4-204ENST00000406949 TRIM27P14373 513 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 ATF7IPQ6VMQ6 1270 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 LNPKQ9C0E8 428 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 USP35Q9P2H5 1018 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 ZRANB1Q9UGI0 708 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 NCKAP5LQ9HCH0 1330 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 NSD2O96028 1365 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 VWDEQ8N2E2 1590 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 C1orf115Q9H7X2 142 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 MROH1Q8NDA8 1641 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 MROH2AA6NES4 1674 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 ZBTB7CA1YPR0 619 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 SEC24BO95487 1268 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 TMEM57Q8N5G2 664 aa15.04■□□□□ -0
PCNX4-204ENST00000406949 YTHDC2Q9H6S0 1430 aaKnown RBP15.03■□□□□ -0
PCNX4-204ENST00000406949 FRAT2O75474 233 aaPredicted RBP15.03■□□□□ -0
PCNX4-204ENST00000406949 KIF16BQ96L93 1317 aa15.01□□□□□ -0.01
PCNX4-204ENST00000406949 CCDC27Q2M243 656 aa15.01□□□□□ -0.01
PCNX4-204ENST00000406949 NEO1Q92859 1461 aa15.01□□□□□ -0.01
PCNX4-204ENST00000406949 CALD1Q05682 793 aaKnown RBP15.01□□□□□ -0.01
PCNX4-204ENST00000406949 ANKRD45Q5TZF3 282 aa15.01□□□□□ -0.01
PCNX4-204ENST00000406949 DCTN1Q14203 1278 aa15□□□□□ -0.01
PCNX4-204ENST00000406949 NUDT16Q96DE0 195 aaKnown RBP15□□□□□ -0.01
PCNX4-204ENST00000406949 FCHSD2O94868 740 aa15□□□□□ -0.01
PCNX4-204ENST00000406949 TRIM35Q9UPQ4 493 aa15□□□□□ -0.01
PCNX4-204ENST00000406949 PKNOX2Q96KN3 472 aa14.99□□□□□ -0.01
PCNX4-204ENST00000406949 PUS7Q96PZ0 661 aaKnown RBP14.99□□□□□ -0.01
PCNX4-204ENST00000406949 MYOM1P52179 1685 aa14.99□□□□□ -0.01
PCNX4-204ENST00000406949 QRICH2Q9H0J4 1663 aa14.99□□□□□ -0.01
PCNX4-204ENST00000406949 SLC26A8Q96RN1 970 aa14.99□□□□□ -0.01
PCNX4-204ENST00000406949 LMTK2Q8IWU2 1503 aa14.99□□□□□ -0.01
PCNX4-204ENST00000406949 POLKQ9UBT6 870 aa14.99□□□□□ -0.01
PCNX4-204ENST00000406949 ABCC11Q96J66 1382 aa14.98□□□□□ -0.01
PCNX4-204ENST00000406949 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.98□□□□□ -0.01
PCNX4-204ENST00000406949 CFAP74Q9C0B2 1584 aa14.98□□□□□ -0.01
PCNX4-204ENST00000406949 AAMPQ13685 434 aa14.98□□□□□ -0.01
PCNX4-204ENST00000406949 PHACTR3Q96KR7 559 aa14.98□□□□□ -0.01
PCNX4-204ENST00000406949 GLI2P10070 1586 aa14.98□□□□□ -0.01
PCNX4-204ENST00000406949 WASLO00401 505 aaPredicted RBP14.97□□□□□ -0.01
PCNX4-204ENST00000406949 GSE1Q14687 1217 aa14.97□□□□□ -0.01
PCNX4-204ENST00000406949 KIAA1210Q9ULL0 1709 aa14.97□□□□□ -0.01
PCNX4-204ENST00000406949 FAM83GA6ND36 823 aa14.97□□□□□ -0.01
PCNX4-204ENST00000406949 GNAI1P63096 354 aa14.97□□□□□ -0.01
PCNX4-204ENST00000406949 CT47B1P0C2W7 299 aaPredicted RBP14.96□□□□□ -0.01
PCNX4-204ENST00000406949 NFE2L2Q16236 605 aa14.96□□□□□ -0.01
PCNX4-204ENST00000406949 NGDNQ8NEJ9 315 aaKnown RBP14.96□□□□□ -0.01
PCNX4-204ENST00000406949 CCDC61Q9Y6R9 512 aa14.96□□□□□ -0.01
PCNX4-204ENST00000406949 FRMPD1Q5SYB0 1578 aa14.96□□□□□ -0.01
PCNX4-204ENST00000406949 NRXN1Q9ULB1 1477 aa14.96□□□□□ -0.01
PCNX4-204ENST00000406949 SULT6B1Q6IMI4 303 aa14.96□□□□□ -0.02
PCNX4-204ENST00000406949 LMOD3Q0VAK6 560 aa14.95□□□□□ -0.02
PCNX4-204ENST00000406949 TWISTNBQ3B726 338 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-204ENST00000406949 HSCBQ8IWL3 235 aa14.95□□□□□ -0.02
PCNX4-204ENST00000406949 RIMS2Q9UQ26 1411 aa14.95□□□□□ -0.02
PCNX4-204ENST00000406949 TULP4Q9NRJ4 1543 aa14.95□□□□□ -0.02
PCNX4-204ENST00000406949 LTV1Q96GA3 475 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-204ENST00000406949 C22orf23Q9BZE7 217 aa14.95□□□□□ -0.02
PCNX4-204ENST00000406949 GZF1Q9H116 711 aaPredicted RBP14.95□□□□□ -0.02
PCNX4-204ENST00000406949 ADGRB1O14514 1584 aa14.94□□□□□ -0.02
PCNX4-204ENST00000406949 SETBP1Q9Y6X0 1596 aa14.94□□□□□ -0.02
PCNX4-204ENST00000406949 CEBPAP49715 358 aaPredicted RBP14.94□□□□□ -0.02
PCNX4-204ENST00000406949 NUTM2GQ5VZR2 741 aa14.94□□□□□ -0.02
PCNX4-204ENST00000406949 SLC4A10Q6U841 1118 aa14.94□□□□□ -0.02
PCNX4-204ENST00000406949 CHMP4BQ9H444 224 aaKnown RBP14.94□□□□□ -0.02
PCNX4-204ENST00000406949 FOXD4L1Q9NU39 408 aa14.94□□□□□ -0.02
PCNX4-204ENST00000406949 RTF1Q92541 710 aaKnown RBP14.93□□□□□ -0.02
PCNX4-204ENST00000406949 PLEKHF1Q96S99 279 aa14.93□□□□□ -0.02
PCNX4-204ENST00000406949 UBE2Q2Q8WVN8 375 aa14.93□□□□□ -0.02
PCNX4-204ENST00000406949 EID1Q9Y6B2 187 aa14.93□□□□□ -0.02
PCNX4-204ENST00000406949 HSP90AB1P08238 724 aaKnown RBP14.93□□□□□ -0.02
PCNX4-204ENST00000406949 TSPYL6Q8N831 410 aa14.93□□□□□ -0.02
PCNX4-204ENST00000406949 IL27Q8NEV9 243 aa14.92□□□□□ -0.02
PCNX4-204ENST00000406949 AMPHP49418 695 aa14.92□□□□□ -0.02
PCNX4-204ENST00000406949 CAMSAP1Q5T5Y3 1602 aa14.92□□□□□ -0.02
PCNX4-204ENST00000406949 RSPH6AQ9H0K4 717 aa14.91□□□□□ -0.02
PCNX4-204ENST00000406949 PPIP5K1Q6PFW1 1433 aa14.91□□□□□ -0.02
PCNX4-204ENST00000406949 PHF23Q9BUL5 403 aaPredicted RBP14.91□□□□□ -0.02
PCNX4-204ENST00000406949 DIP2CQ9Y2E4 1556 aa14.9□□□□□ -0.02
PCNX4-204ENST00000406949 TSPOAP1O95153 1857 aa14.9□□□□□ -0.02
PCNX4-204ENST00000406949 MCM10Q7L590 875 aa14.9□□□□□ -0.02
PCNX4-204ENST00000406949 NECTIN2Q92692 538 aa14.9□□□□□ -0.02
PCNX4-204ENST00000406949 MBIPQ9NS73 344 aa14.9□□□□□ -0.02
PCNX4-204ENST00000406949 AEBP1Q8IUX7 1158 aa14.9□□□□□ -0.02
PCNX4-204ENST00000406949 NEXMIFQ5QGS0 1516 aa14.9□□□□□ -0.02
PCNX4-204ENST00000406949 MIS18AQ9NYP9 233 aa14.89□□□□□ -0.03
PCNX4-204ENST00000406949 LMOD2Q6P5Q4 547 aa14.89□□□□□ -0.03
PCNX4-204ENST00000406949 PPLO60437 1756 aa14.89□□□□□ -0.03
PCNX4-204ENST00000406949 BRPF3Q9ULD4 1205 aa14.88□□□□□ -0.03
PCNX4-204ENST00000406949 IL16Q14005 1332 aa14.88□□□□□ -0.03
PCNX4-204ENST00000406949 ARHGAP31Q2M1Z3 1444 aa14.88□□□□□ -0.03
PCNX4-204ENST00000406949 CHD1LQ86WJ1 897 aa14.88□□□□□ -0.03
PCNX4-204ENST00000406949 TRHP20396 242 aaPredicted RBP14.87□□□□□ -0.03
PCNX4-204ENST00000406949 API5Q9BZZ5 524 aaKnown RBP14.87□□□□□ -0.03
PCNX4-204ENST00000406949 KRT24Q2M2I5 525 aa14.87□□□□□ -0.03
PCNX4-204ENST00000406949 ALDH1L2Q3SY69 923 aa14.87□□□□□ -0.03
PCNX4-204ENST00000406949 TBC1D2Q9BYX2 928 aa14.87□□□□□ -0.03
PCNX4-204ENST00000406949 C8orf58Q8NAV2 365 aa14.87□□□□□ -0.03
PCNX4-204ENST00000406949 TBC1D32Q96NH3 1257 aa14.86□□□□□ -0.03
PCNX4-204ENST00000406949 ZNF692Q9BU19 519 aaPredicted RBP14.86□□□□□ -0.03
PCNX4-204ENST00000406949 NEURL4Q96JN8 1562 aa14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 87.8 ms