RNA–Protein interactions for RNA: ENST00000406434.5

FAM49A-202, Transcript of family with sequence similarity 49 member A, humanhuman

APPRIS P1 TSL 5 BASIC

Gene FAM49A, Length 1,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM49A-202ENST00000406434 RXRBP28702 533 aa14.68□□□□□ -0.06
FAM49A-202ENST00000406434 SBNO1A3KN83 1393 aa14.68□□□□□ -0.06
FAM49A-202ENST00000406434 USP21Q9UK80 565 aa14.67□□□□□ -0.06
FAM49A-202ENST00000406434 ACEP12821 1306 aa14.67□□□□□ -0.06
FAM49A-202ENST00000406434 EVC2Q86UK5 1308 aa14.67□□□□□ -0.06
FAM49A-202ENST00000406434 TNS3Q68CZ2 1445 aa14.67□□□□□ -0.06
FAM49A-202ENST00000406434 CCER1Q8TC90 406 aaPredicted RBP14.66□□□□□ -0.06
FAM49A-202ENST00000406434 QRICH2Q9H0J4 1663 aa14.66□□□□□ -0.06
FAM49A-202ENST00000406434 COL22A1Q8NFW1 1626 aaPredicted RBP14.65□□□□□ -0.06
FAM49A-202ENST00000406434 ATP7BP35670 1465 aa14.65□□□□□ -0.06
FAM49A-202ENST00000406434 ARHGEF10O15013 1369 aa14.65□□□□□ -0.06
FAM49A-202ENST00000406434 PLEKHG3A1L390 1219 aa14.65□□□□□ -0.06
FAM49A-202ENST00000406434 CABP1Q9NZU7 370 aa14.65□□□□□ -0.06
FAM49A-202ENST00000406434 NUTM2GQ5VZR2 741 aa14.64□□□□□ -0.07
FAM49A-202ENST00000406434 ITSN1Q15811 1721 aa14.64□□□□□ -0.07
FAM49A-202ENST00000406434 FNBP4Q8N3X1 1017 aaPredicted RBP14.63□□□□□ -0.07
FAM49A-202ENST00000406434 PPIP5K1Q6PFW1 1433 aa14.63□□□□□ -0.07
FAM49A-202ENST00000406434 ZNF219Q9P2Y4 722 aaPredicted RBP14.62□□□□□ -0.07
FAM49A-202ENST00000406434 TRPC5Q9UL62 973 aaPredicted RBP14.62□□□□□ -0.07
FAM49A-202ENST00000406434 RBM6P78332 1123 aaKnown RBP14.61□□□□□ -0.07
FAM49A-202ENST00000406434 RALGAPBQ86X10 1494 aa14.61□□□□□ -0.07
FAM49A-202ENST00000406434 ABTB2Q8N961 1025 aa14.6□□□□□ -0.07
FAM49A-202ENST00000406434 POLR3AO14802 1390 aaPredicted RBP14.6□□□□□ -0.07
FAM49A-202ENST00000406434 TRPM3Q9HCF6 1732 aaPredicted RBP14.6□□□□□ -0.07
FAM49A-202ENST00000406434 CLSPNQ9HAW4 1339 aa14.6□□□□□ -0.07
FAM49A-202ENST00000406434 FAM83GA6ND36 823 aa14.6□□□□□ -0.07
FAM49A-202ENST00000406434 MARF1Q9Y4F3 1742 aaKnown RBP14.59□□□□□ -0.07
FAM49A-202ENST00000406434 ST20-MTHFSA0A0A6YYL1 179 aa14.59□□□□□ -0.07
FAM49A-202ENST00000406434 UNC5CLQ8IV45 518 aa14.58□□□□□ -0.08
FAM49A-202ENST00000406434 TMC1Q8TDI8 760 aa14.58□□□□□ -0.08
FAM49A-202ENST00000406434 TIMELESSQ9UNS1 1208 aa14.58□□□□□ -0.08
FAM49A-202ENST00000406434 TOPAZ1Q8N9V7 1692 aa14.57□□□□□ -0.08
FAM49A-202ENST00000406434 CCDC9Q9Y3X0 531 aaKnown RBP14.57□□□□□ -0.08
FAM49A-202ENST00000406434 BCL9LQ86UU0 1499 aa14.56□□□□□ -0.08
FAM49A-202ENST00000406434 ALS2Q96Q42 1657 aa14.56□□□□□ -0.08
FAM49A-202ENST00000406434 ZC3H6P61129 1189 aaKnown RBP14.56□□□□□ -0.08
FAM49A-202ENST00000406434 NLRP13Q86W25 1043 aa14.55□□□□□ -0.08
FAM49A-202ENST00000406434 GJD4Q96KN9 370 aaPredicted RBP14.55□□□□□ -0.08
FAM49A-202ENST00000406434 ZNF692Q9BU19 519 aaPredicted RBP14.55□□□□□ -0.08
FAM49A-202ENST00000406434 PRDM11Q9NQV5 511 aa14.55□□□□□ -0.08
FAM49A-202ENST00000406434 ATRNO75882 1429 aa14.54□□□□□ -0.08
FAM49A-202ENST00000406434 ATAD2Q6PL18 1390 aa14.54□□□□□ -0.08
FAM49A-202ENST00000406434 NLRP6P59044 892 aa14.54□□□□□ -0.08
FAM49A-202ENST00000406434 FKBP8Q14318 412 aa14.54□□□□□ -0.08
FAM49A-202ENST00000406434 CHRNA2Q15822 529 aa14.54□□□□□ -0.08
FAM49A-202ENST00000406434 SPINK5Q9NQ38 1064 aaPredicted RBP14.54□□□□□ -0.08
FAM49A-202ENST00000406434 BTG4Q9NY30 223 aa14.54□□□□□ -0.08
FAM49A-202ENST00000406434 SBNO2Q9Y2G9 1366 aa14.53□□□□□ -0.08
FAM49A-202ENST00000406434 SLC12A5Q9H2X9 1139 aa14.53□□□□□ -0.08
FAM49A-202ENST00000406434 SLIT2O94813 1529 aa14.53□□□□□ -0.08
FAM49A-202ENST00000406434 ABCA3Q99758 1704 aa14.52□□□□□ -0.08
FAM49A-202ENST00000406434 ZBTB7CA1YPR0 619 aa14.52□□□□□ -0.08
FAM49A-202ENST00000406434 SLC24A1O60721 1099 aa14.51□□□□□ -0.09
FAM49A-202ENST00000406434 TESK2Q96S53 571 aa14.51□□□□□ -0.09
FAM49A-202ENST00000406434 USP6P35125 1406 aa14.51□□□□□ -0.09
FAM49A-202ENST00000406434 TTC21BQ7Z4L5 1316 aa14.51□□□□□ -0.09
FAM49A-202ENST00000406434 KTN1Q86UP2 1357 aaKnown RBP14.51□□□□□ -0.09
FAM49A-202ENST00000406434 KIAA0232Q92628 1395 aa14.51□□□□□ -0.09
FAM49A-202ENST00000406434 USP47Q96K76 1375 aa14.51□□□□□ -0.09
FAM49A-202ENST00000406434 GCP02774 474 aa14.5□□□□□ -0.09
FAM49A-202ENST00000406434 VPS72Q15906 364 aa14.5□□□□□ -0.09
FAM49A-202ENST00000406434 HDGFL2Q7Z4V5 671 aaPredicted RBP14.5□□□□□ -0.09
FAM49A-202ENST00000406434 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.5□□□□□ -0.09
FAM49A-202ENST00000406434 CDK12Q9NYV4 1490 aaPredicted RBP14.5□□□□□ -0.09
FAM49A-202ENST00000406434 BRD4O60885 1362 aaPredicted RBP14.5□□□□□ -0.09
FAM49A-202ENST00000406434 RGS12O14924 1447 aa14.49□□□□□ -0.09
FAM49A-202ENST00000406434 EVA1CP58658 441 aa14.49□□□□□ -0.09
FAM49A-202ENST00000406434 C1QBPQ07021 282 aaKnown RBP14.49□□□□□ -0.09
FAM49A-202ENST00000406434 STRN4Q9NRL3 753 aa14.49□□□□□ -0.09
FAM49A-202ENST00000406434 A0A0G2JS52 829 aa14.48□□□□□ -0.09
FAM49A-202ENST00000406434 SOX12O15370 315 aa14.48□□□□□ -0.09
FAM49A-202ENST00000406434 TMF1P82094 1093 aa14.48□□□□□ -0.09
FAM49A-202ENST00000406434 MYT1Q01538 1121 aa14.48□□□□□ -0.09
FAM49A-202ENST00000406434 PUS7Q96PZ0 661 aaKnown RBP14.48□□□□□ -0.09
FAM49A-202ENST00000406434 PLCH1Q4KWH8 1693 aa14.48□□□□□ -0.09
FAM49A-202ENST00000406434 UPF1Q92900 1129 aaKnown RBP eCLIP14.47□□□□□ -0.09
FAM49A-202ENST00000406434 TERF2IPQ9NYB0 399 aa14.47□□□□□ -0.09
FAM49A-202ENST00000406434 COL14A1Q05707 1796 aaKnown RBP14.47□□□□□ -0.09
FAM49A-202ENST00000406434 ZRANB1Q9UGI0 708 aa14.47□□□□□ -0.09
FAM49A-202ENST00000406434 USP19O94966 1318 aa14.46□□□□□ -0.09
FAM49A-202ENST00000406434 TTC21AQ8NDW8 1320 aa14.46□□□□□ -0.09
FAM49A-202ENST00000406434 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.46□□□□□ -0.09
FAM49A-202ENST00000406434 NWD2Q9ULI1 1742 aa14.46□□□□□ -0.09
FAM49A-202ENST00000406434 CRYBG1Q9Y4K1 1723 aa14.46□□□□□ -0.09
FAM49A-202ENST00000406434 CPSF1Q10570 1443 aaKnown RBP14.46□□□□□ -0.09
FAM49A-202ENST00000406434 SSH2Q76I76 1423 aa14.46□□□□□ -0.09
FAM49A-202ENST00000406434 PHRF1Q9P1Y6 1649 aaKnown RBP14.46□□□□□ -0.1
FAM49A-202ENST00000406434 FAM98CQ17RN3 349 aaKnown RBP14.46□□□□□ -0.1
FAM49A-202ENST00000406434 SEPT12Q8IYM1 358 aa14.46□□□□□ -0.1
FAM49A-202ENST00000406434 AKAP12Q02952 1782 aa14.45□□□□□ -0.1
FAM49A-202ENST00000406434 USP35Q9P2H5 1018 aa14.45□□□□□ -0.1
FAM49A-202ENST00000406434 NME9Q86XW9 330 aa14.44□□□□□ -0.1
FAM49A-202ENST00000406434 POLR3GLQ9BT43 218 aa14.44□□□□□ -0.1
FAM49A-202ENST00000406434 GLI3P10071 1580 aa14.44□□□□□ -0.1
FAM49A-202ENST00000406434 CDCA8Q53HL2 280 aa14.43□□□□□ -0.1
FAM49A-202ENST00000406434 KCNH5Q8NCM2 988 aa14.43□□□□□ -0.1
FAM49A-202ENST00000406434 CPDO75976 1380 aa14.42□□□□□ -0.1
FAM49A-202ENST00000406434 SPATA31A5Q5VU36 1347 aa14.42□□□□□ -0.1
FAM49A-202ENST00000406434 SPATA31A7Q8IWB4 1347 aa14.42□□□□□ -0.1
FAM49A-202ENST00000406434 PIK3C2AO00443 1686 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms