RNA–Protein interactions for RNA: ENST00000405954.1

DUSP28-202, Transcript of dual specificity phosphatase 28, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DUSP28, Length 3,461 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUSP28-202ENST00000405954 PPP2R1AP30153 589 aa17.06■□□□□ 0.32
DUSP28-202ENST00000405954 TESK2Q96S53 571 aa17.06■□□□□ 0.32
DUSP28-202ENST00000405954 RBM25P49756 843 aaKnown RBP17.05■□□□□ 0.32
DUSP28-202ENST00000405954 TMX1Q9H3N1 280 aa17.05■□□□□ 0.32
DUSP28-202ENST00000405954 OGFRQ9NZT2 677 aa17.05■□□□□ 0.32
DUSP28-202ENST00000405954 SYNJ2O15056 1496 aa17.05■□□□□ 0.32
DUSP28-202ENST00000405954 GOLGA6L6A8MZA4 724 aa17.05■□□□□ 0.32
DUSP28-202ENST00000405954 SECISBP2LQ93073 1101 aaKnown RBP17.05■□□□□ 0.32
DUSP28-202ENST00000405954 ADGBQ8N7X0 1667 aa17.05■□□□□ 0.32
DUSP28-202ENST00000405954 MAGI1Q96QZ7 1491 aaPredicted RBP17.05■□□□□ 0.32
DUSP28-202ENST00000405954 RIOK3O14730 519 aaKnown RBP17.05■□□□□ 0.32
DUSP28-202ENST00000405954 DZIP1LQ8IYY4 767 aaKnown RBP17.04■□□□□ 0.32
DUSP28-202ENST00000405954 ZNF710Q8N1W2 664 aa17.04■□□□□ 0.32
DUSP28-202ENST00000405954 CARMIL2Q6F5E8 1435 aa17.04■□□□□ 0.32
DUSP28-202ENST00000405954 ST18O60284 1047 aa17.04■□□□□ 0.32
DUSP28-202ENST00000405954 ZKSCAN2Q63HK3 967 aa17.04■□□□□ 0.32
DUSP28-202ENST00000405954 FEZ1Q99689 392 aa17.04■□□□□ 0.32
DUSP28-202ENST00000405954 CDC42BPAQ5VT25 1732 aa17.03■□□□□ 0.32
DUSP28-202ENST00000405954 MBD3O95983 291 aa17.03■□□□□ 0.32
DUSP28-202ENST00000405954 RSPH4AQ5TD94 716 aa17.03■□□□□ 0.32
DUSP28-202ENST00000405954 DMRT2Q9Y5R5 561 aa17.03■□□□□ 0.32
DUSP28-202ENST00000405954 APBB1O00213 710 aa17.02■□□□□ 0.32
DUSP28-202ENST00000405954 GTF2F1P35269 517 aaKnown RBP eCLIP17.02■□□□□ 0.32
DUSP28-202ENST00000405954 SNX21Q969T3 373 aa17.02■□□□□ 0.32
DUSP28-202ENST00000405954 EIF2AK3Q9NZJ5 1116 aaKnown RBP17.02■□□□□ 0.32
DUSP28-202ENST00000405954 PARD3Q8TEW0 1356 aa17.02■□□□□ 0.31
DUSP28-202ENST00000405954 RLBP1P12271 317 aa17.02■□□□□ 0.31
DUSP28-202ENST00000405954 CHMP4CQ96CF2 233 aa17.02■□□□□ 0.31
DUSP28-202ENST00000405954 ITSN2Q9NZM3 1697 aa17.02■□□□□ 0.31
DUSP28-202ENST00000405954 NKTRP30414 1462 aaKnown RBP17.01■□□□□ 0.31
DUSP28-202ENST00000405954 ADCY5O95622 1261 aa17.01■□□□□ 0.31
DUSP28-202ENST00000405954 PIBF1Q8WXW3 757 aa17.01■□□□□ 0.31
DUSP28-202ENST00000405954 C16orf45Q96MC5 204 aaPredicted RBP17.01■□□□□ 0.31
DUSP28-202ENST00000405954 PLEKHH2Q8IVE3 1493 aa17.01■□□□□ 0.31
DUSP28-202ENST00000405954 PRAG1Q86YV5 1406 aa17.01■□□□□ 0.31
DUSP28-202ENST00000405954 CCDC112Q8NEF3 446 aa17.01■□□□□ 0.31
DUSP28-202ENST00000405954 CHAMP1Q96JM3 812 aa17.01■□□□□ 0.31
DUSP28-202ENST00000405954 FAM135AQ9P2D6 1515 aa17■□□□□ 0.31
DUSP28-202ENST00000405954 CHGAP10645 457 aaKnown RBP17■□□□□ 0.31
DUSP28-202ENST00000405954 GPATCH11Q8N954 259 aa17■□□□□ 0.31
DUSP28-202ENST00000405954 ZNF692Q9BU19 519 aaPredicted RBP17■□□□□ 0.31
DUSP28-202ENST00000405954 CASC1Q6TDU7 716 aa16.99■□□□□ 0.31
DUSP28-202ENST00000405954 UHRF1BP1Q6BDS2 1440 aa16.99■□□□□ 0.31
DUSP28-202ENST00000405954 GABPB1Q06547 395 aaPredicted RBP16.99■□□□□ 0.31
DUSP28-202ENST00000405954 KRT222Q8N1A0 295 aa16.99■□□□□ 0.31
DUSP28-202ENST00000405954 TSPYL1Q9H0U9 437 aa16.99■□□□□ 0.31
DUSP28-202ENST00000405954 CROCC2H7BZ55 1655 aa16.99■□□□□ 0.31
DUSP28-202ENST00000405954 NUTM2DQ5VT03 806 aaPredicted RBP16.98■□□□□ 0.31
DUSP28-202ENST00000405954 PDLIM2Q96JY6 352 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 ADGRL2O95490 1459 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 A2MP01023 1474 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 CD2BP2O95400 341 aaKnown RBP16.98■□□□□ 0.31
DUSP28-202ENST00000405954 TOMM22Q9NS69 142 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 AFAP1Q8N556 730 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 RTF1Q92541 710 aaKnown RBP16.98■□□□□ 0.31
DUSP28-202ENST00000405954 GDPD2Q9HCC8 539 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 LMBRD1Q9NUN5 540 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 TMEM63CQ9P1W3 806 aa16.98■□□□□ 0.31
DUSP28-202ENST00000405954 NOL12Q9UGY1 213 aaKnown RBP eCLIP16.98■□□□□ 0.31
DUSP28-202ENST00000405954 V9GYY5 206 aaPredicted RBP16.98■□□□□ 0.31
DUSP28-202ENST00000405954 SYCP2Q9BX26 1530 aa16.97■□□□□ 0.31
DUSP28-202ENST00000405954 ERBINQ96RT1 1412 aa16.97■□□□□ 0.31
DUSP28-202ENST00000405954 PTPRGP23470 1445 aa16.97■□□□□ 0.31
DUSP28-202ENST00000405954 PLA2R1Q13018 1463 aa16.97■□□□□ 0.31
DUSP28-202ENST00000405954 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
DUSP28-202ENST00000405954 MVPQ14764 893 aaKnown RBP16.96■□□□□ 0.31
DUSP28-202ENST00000405954 GTF2A1P52655 376 aaPredicted RBP16.96■□□□□ 0.31
DUSP28-202ENST00000405954 RARSP54136 660 aaKnown RBP16.96■□□□□ 0.31
DUSP28-202ENST00000405954 PKP1Q13835 747 aa16.96■□□□□ 0.31
DUSP28-202ENST00000405954 TPD52L1Q16890 204 aaPredicted RBP16.96■□□□□ 0.31
DUSP28-202ENST00000405954 KDM5DQ9BY66 1539 aa16.95■□□□□ 0.3
DUSP28-202ENST00000405954 TEX35Q5T0J7 233 aa16.95■□□□□ 0.3
DUSP28-202ENST00000405954 BRD2P25440 801 aaKnown RBP16.95■□□□□ 0.3
DUSP28-202ENST00000405954 CHMP3Q9Y3E7 222 aa16.95■□□□□ 0.3
DUSP28-202ENST00000405954 ABCC10Q5T3U5 1492 aa16.95■□□□□ 0.3
DUSP28-202ENST00000405954 ARHGAP5Q13017 1502 aa16.95■□□□□ 0.3
DUSP28-202ENST00000405954 HCLS1P14317 486 aaPredicted RBP16.94■□□□□ 0.3
DUSP28-202ENST00000405954 DDX19BQ9UMR2 479 aa16.94■□□□□ 0.3
DUSP28-202ENST00000405954 HDAC5Q9UQL6 1122 aa16.94■□□□□ 0.3
DUSP28-202ENST00000405954 HTATSF1O43719 755 aaKnown RBP16.94■□□□□ 0.3
DUSP28-202ENST00000405954 TEX2Q8IWB9 1127 aa16.94■□□□□ 0.3
DUSP28-202ENST00000405954 RSPH14Q9UHP6 348 aa16.93■□□□□ 0.3
DUSP28-202ENST00000405954 SRPK2P78362 688 aaKnown RBP16.93■□□□□ 0.3
DUSP28-202ENST00000405954 RABEP1Q15276 862 aa16.93■□□□□ 0.3
DUSP28-202ENST00000405954 GOLGA6L1Q8N7Z2 621 aa16.93■□□□□ 0.3
DUSP28-202ENST00000405954 POLR3GO15318 223 aaPredicted RBP16.92■□□□□ 0.3
DUSP28-202ENST00000405954 C10orf67Q8IYJ2 551 aa16.92■□□□□ 0.3
DUSP28-202ENST00000405954 GPT2Q8TD30 523 aa16.92■□□□□ 0.3
DUSP28-202ENST00000405954 ZGPATQ8N5A5 531 aaKnown RBP16.92■□□□□ 0.3
DUSP28-202ENST00000405954 TNNT1P13805 278 aa16.91■□□□□ 0.3
DUSP28-202ENST00000405954 WWC1Q8IX03 1113 aa16.91■□□□□ 0.3
DUSP28-202ENST00000405954 NOL10Q9BSC4 688 aaKnown RBP16.91■□□□□ 0.3
DUSP28-202ENST00000405954 CFAP70Q5T0N1 1121 aa16.91■□□□□ 0.3
DUSP28-202ENST00000405954 SAMD9LQ8IVG5 1584 aa16.91■□□□□ 0.3
DUSP28-202ENST00000405954 MAGI2Q86UL8 1455 aa16.91■□□□□ 0.3
DUSP28-202ENST00000405954 SAFB2Q14151 953 aaKnown RBP eCLIP16.91■□□□□ 0.3
DUSP28-202ENST00000405954 NINLQ9Y2I6 1382 aa16.91■□□□□ 0.3
DUSP28-202ENST00000405954 NPM1P06748 294 aaKnown RBP eCLIP16.9■□□□□ 0.3
DUSP28-202ENST00000405954 IBTKQ9P2D0 1353 aaPredicted RBP16.9■□□□□ 0.3
DUSP28-202ENST00000405954 CDCA8Q53HL2 280 aa16.9■□□□□ 0.3
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms