RNA–Protein interactions for RNA: ENST00000405547.7

SNED1-205, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SNED1, Length 7,986 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-205ENST00000405547 RRP9O43818 475 aaKnown RBP16■□□□□ 0.15
SNED1-205ENST00000405547 ZNF428Q96B54 188 aa16■□□□□ 0.15
SNED1-205ENST00000405547 CABP2Q9NPB3 220 aa16■□□□□ 0.15
SNED1-205ENST00000405547 PCF11O94913 1555 aaKnown RBP16■□□□□ 0.15
SNED1-205ENST00000405547 WDR33Q9C0J8 1336 aaKnown RBP16■□□□□ 0.15
SNED1-205ENST00000405547 DAPK1P53355 1430 aa15.99■□□□□ 0.15
SNED1-205ENST00000405547 CCDC192P0DO97 292 aa15.99■□□□□ 0.15
SNED1-205ENST00000405547 ESPNB1AK53 854 aa15.99■□□□□ 0.15
SNED1-205ENST00000405547 TWISTNBQ3B726 338 aaPredicted RBP15.99■□□□□ 0.15
SNED1-205ENST00000405547 NAIPQ13075 1403 aa15.99■□□□□ 0.15
SNED1-205ENST00000405547 NBPF1Q3BBV0 1214 aa15.98■□□□□ 0.15
SNED1-205ENST00000405547 NOL10Q9BSC4 688 aaKnown RBP15.98■□□□□ 0.15
SNED1-205ENST00000405547 CHD1LQ86WJ1 897 aa15.98■□□□□ 0.15
SNED1-205ENST00000405547 PDIA4P13667 645 aaKnown RBP15.98■□□□□ 0.15
SNED1-205ENST00000405547 CDR1P51861 262 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 PSME1Q06323 249 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 GAS2L2Q8NHY3 880 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 SURF6O75683 361 aaKnown RBP15.97■□□□□ 0.15
SNED1-205ENST00000405547 ANKRD1Q15327 319 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 ERC1Q8IUD2 1116 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 PRKAR2BP31323 418 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 RIC3Q7Z5B4 369 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 CCDC27Q2M243 656 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 AEBP1Q8IUX7 1158 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 FBXW7Q969H0 707 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 SRCIN1Q9C0H9 1055 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 DHX16O60231 1041 aaKnown RBP15.97■□□□□ 0.15
SNED1-205ENST00000405547 ERCC4Q92889 916 aaPredicted RBP15.97■□□□□ 0.15
SNED1-205ENST00000405547 XBP1P17861 261 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 CCDC184Q52MB2 194 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 CFAP70Q5T0N1 1121 aa15.97■□□□□ 0.15
SNED1-205ENST00000405547 CCT4P50991 539 aaKnown RBP15.96■□□□□ 0.15
SNED1-205ENST00000405547 TMEM132EQ6IEE7 984 aa15.96■□□□□ 0.15
SNED1-205ENST00000405547 TROQ12816 1431 aaPredicted RBP15.96■□□□□ 0.14
SNED1-205ENST00000405547 NCBP3Q53F19 620 aaKnown RBP15.96■□□□□ 0.14
SNED1-205ENST00000405547 ZNF396Q96N95 335 aaPredicted RBP15.95■□□□□ 0.14
SNED1-205ENST00000405547 FIBPO43427 364 aa15.95■□□□□ 0.14
SNED1-205ENST00000405547 BRMS1Q9HCU9 246 aa15.95■□□□□ 0.14
SNED1-205ENST00000405547 PDE4CQ08493 712 aa15.95■□□□□ 0.14
SNED1-205ENST00000405547 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP15.95■□□□□ 0.14
SNED1-205ENST00000405547 NKTRP30414 1462 aaKnown RBP15.95■□□□□ 0.14
SNED1-205ENST00000405547 VPS37DQ86XT2 251 aa15.95■□□□□ 0.14
SNED1-205ENST00000405547 ANO8Q9HCE9 1232 aaPredicted RBP15.95■□□□□ 0.14
SNED1-205ENST00000405547 FSD1Q9BTV5 496 aa15.94■□□□□ 0.14
SNED1-205ENST00000405547 SLFN5Q08AF3 891 aa15.94■□□□□ 0.14
SNED1-205ENST00000405547 AQRO60306 1485 aaKnown RBP eCLIP15.94■□□□□ 0.14
SNED1-205ENST00000405547 EVA1CP58658 441 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 LRRCC1Q9C099 1032 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 POLA1P09884 1462 aaPredicted RBP15.93■□□□□ 0.14
SNED1-205ENST00000405547 WWC1Q8IX03 1113 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 C1orf115Q9H7X2 142 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 TSR2Q969E8 191 aaKnown RBP15.93■□□□□ 0.14
SNED1-205ENST00000405547 HMGXB3Q12766 1538 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 FOSBP53539 338 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 KRT85P78386 507 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 PDILTQ8N807 584 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 CYP46A1Q9Y6A2 500 aa15.93■□□□□ 0.14
SNED1-205ENST00000405547 NEUROD6Q96NK8 337 aa15.92■□□□□ 0.14
SNED1-205ENST00000405547 SMC2O95347 1197 aa15.92■□□□□ 0.14
SNED1-205ENST00000405547 JMYQ8N9B5 988 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 MSH5O43196 834 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 WASHC4Q2M389 1173 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 SLC12A5Q9H2X9 1139 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 DNMBPQ6XZF7 1577 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 SMARCE1Q969G3 411 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 SPC24Q8NBT2 197 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 TNMDQ9H2S6 317 aa15.91■□□□□ 0.14
SNED1-205ENST00000405547 SART3Q15020 963 aaKnown RBP15.9■□□□□ 0.14
SNED1-205ENST00000405547 RAPGEF4Q8WZA2 1011 aa15.9■□□□□ 0.14
SNED1-205ENST00000405547 FILIP1LQ4L180 1135 aa15.9■□□□□ 0.14
SNED1-205ENST00000405547 ZSCAN30Q86W11 494 aa15.9■□□□□ 0.14
SNED1-205ENST00000405547 NAP1L1P55209 391 aaKnown RBP15.9■□□□□ 0.14
SNED1-205ENST00000405547 UQCRHLA0A096LP55 91 aa15.89■□□□□ 0.13
SNED1-205ENST00000405547 UQCRHP07919 91 aa15.89■□□□□ 0.13
SNED1-205ENST00000405547 EPRSP07814 1512 aaKnown RBP15.89■□□□□ 0.13
SNED1-205ENST00000405547 RBM10P98175 930 aaKnown RBP15.89■□□□□ 0.13
SNED1-205ENST00000405547 CCDC141Q6ZP82 1450 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 SLC4A2P04920 1241 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 TOPBP1Q92547 1522 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 NCOA1Q15788 1441 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 CCDC112Q8NEF3 446 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 AIMP1Q12904 312 aaKnown RBP15.88■□□□□ 0.13
SNED1-205ENST00000405547 CFAP45Q9UL16 551 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 IQGAP2Q13576 1575 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 CAGE1Q8TC20 777 aa15.88■□□□□ 0.13
SNED1-205ENST00000405547 PKNOX2Q96KN3 472 aa15.87■□□□□ 0.13
SNED1-205ENST00000405547 CC2D2AQ9P2K1 1620 aa15.87■□□□□ 0.13
SNED1-205ENST00000405547 TCEAL9Q9UHQ7 104 aa15.87■□□□□ 0.13
SNED1-205ENST00000405547 LEKR1Q6ZMV7 388 aa15.87■□□□□ 0.13
SNED1-205ENST00000405547 PIP4K2AP48426 406 aaPredicted RBP15.87■□□□□ 0.13
SNED1-205ENST00000405547 ANKRD30BQ9BXX2 1392 aa15.87■□□□□ 0.13
SNED1-205ENST00000405547 STK38Q15208 465 aa15.86■□□□□ 0.13
SNED1-205ENST00000405547 LARP1BQ659C4 914 aaKnown RBP15.86■□□□□ 0.13
SNED1-205ENST00000405547 EPS15P42566 896 aa15.86■□□□□ 0.13
SNED1-205ENST00000405547 MYO6Q9UM54 1294 aa15.86■□□□□ 0.13
SNED1-205ENST00000405547 DCTN1Q14203 1278 aa15.86■□□□□ 0.13
SNED1-205ENST00000405547 FMNL2Q96PY5 1086 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 NLRP6P59044 892 aa15.85■□□□□ 0.13
SNED1-205ENST00000405547 ZNF692Q9BU19 519 aaPredicted RBP15.85■□□□□ 0.13
SNED1-205ENST00000405547 TBC1D2BQ9UPU7 963 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 9.9 ms